RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 UPK3BQ9BT76 320 aa12.74□□□□□ -0.37
HERPUD2-202ENST00000396081 FAM19A1Q7Z5A9 133 aa12.73□□□□□ -0.37
HERPUD2-202ENST00000396081 CCKP06307 115 aa12.73□□□□□ -0.37
HERPUD2-202ENST00000396081 WFDC10AQ9H1F0 79 aa12.73□□□□□ -0.37
HERPUD2-202ENST00000396081 ENHOQ6UWT2 76 aa12.73□□□□□ -0.37
HERPUD2-202ENST00000396081 TMEM86BQ8N661 226 aa12.72□□□□□ -0.37
HERPUD2-202ENST00000396081 NIPBLQ6KC79 2804 aaeCLIP12.72□□□□□ -0.37
HERPUD2-202ENST00000396081 A0A087WZ39 114 aa12.72□□□□□ -0.37
HERPUD2-202ENST00000396081 SS18Q15532 418 aa12.72□□□□□ -0.37
HERPUD2-202ENST00000396081 NF1P21359 2839 aa12.71□□□□□ -0.37
HERPUD2-202ENST00000396081 TRBV6-8A0A0A6YYG3 113 aa12.71□□□□□ -0.37
HERPUD2-202ENST00000396081 J3QLI3 93 aa12.7□□□□□ -0.38
HERPUD2-202ENST00000396081 OXTP01178 125 aa12.7□□□□□ -0.38
HERPUD2-202ENST00000396081 DSCR9P59020 149 aa12.7□□□□□ -0.38
HERPUD2-202ENST00000396081 FHL2Q14192 279 aa12.69□□□□□ -0.38
HERPUD2-202ENST00000396081 SETXQ7Z333 2677 aaKnown RBP12.68□□□□□ -0.38
HERPUD2-202ENST00000396081 LINC00959A0A1B0GUT2 108 aa12.68□□□□□ -0.38
HERPUD2-202ENST00000396081 C4orf26Q17RF5 130 aa12.68□□□□□ -0.38
HERPUD2-202ENST00000396081 S100A7L2Q5SY68 101 aa12.68□□□□□ -0.38
HERPUD2-202ENST00000396081 C20orf197Q8N268 126 aa12.68□□□□□ -0.38
HERPUD2-202ENST00000396081 DEFB130BP0DP73 79 aa12.67□□□□□ -0.38
HERPUD2-202ENST00000396081 DEFB130AP0DP74 79 aa12.67□□□□□ -0.38
HERPUD2-202ENST00000396081 JMJD7-PLA2G4BH0Y9G9 81 aa12.66□□□□□ -0.38
HERPUD2-202ENST00000396081 Q8N814 137 aa12.66□□□□□ -0.38
HERPUD2-202ENST00000396081 TRAV25A0A0B4J276 109 aa12.65□□□□□ -0.38
HERPUD2-202ENST00000396081 HRCT1Q6UXD1 115 aa12.65□□□□□ -0.38
HERPUD2-202ENST00000396081 C16orf74Q96GX8 76 aa12.65□□□□□ -0.38
HERPUD2-202ENST00000396081 UBL5Q9BZL1 73 aa12.65□□□□□ -0.38
HERPUD2-202ENST00000396081 A0A096LPF7 62 aa12.65□□□□□ -0.38
HERPUD2-202ENST00000396081 PLAC8L1A1L4L8 177 aa12.64□□□□□ -0.39
HERPUD2-202ENST00000396081 TMEM256-PLSCR3K7ERE1 68 aa12.64□□□□□ -0.39
HERPUD2-202ENST00000396081 LY6G6DO95868 133 aa12.63□□□□□ -0.39
HERPUD2-202ENST00000396081 GIG44P09565 113 aaPredicted RBP12.63□□□□□ -0.39
HERPUD2-202ENST00000396081 CCL24O00175 119 aa12.63□□□□□ -0.39
HERPUD2-202ENST00000396081 A0A096LNT2 108 aa12.62□□□□□ -0.39
HERPUD2-202ENST00000396081 NBEAL2Q6ZNJ1 2754 aa12.62□□□□□ -0.39
HERPUD2-202ENST00000396081 CR1P17927 2039 aa12.62□□□□□ -0.39
HERPUD2-202ENST00000396081 IGHV4-31P0DP07 118 aa12.62□□□□□ -0.39
HERPUD2-202ENST00000396081 NANOS2P60321 138 aaKnown RBP12.61□□□□□ -0.39
HERPUD2-202ENST00000396081 C6orf99Q4VX62 202 aa12.61□□□□□ -0.39
HERPUD2-202ENST00000396081 C9orf116Q5BN46 136 aaPredicted RBP12.61□□□□□ -0.39
HERPUD2-202ENST00000396081 WIPF1O43516 503 aa12.6□□□□□ -0.39
HERPUD2-202ENST00000396081 MTORP42345 2549 aa12.6□□□□□ -0.39
HERPUD2-202ENST00000396081 LAMTOR3Q9UHA4 124 aa12.6□□□□□ -0.39
HERPUD2-202ENST00000396081 IGLV10-54A0A075B6I4 117 aa12.59□□□□□ -0.39
HERPUD2-202ENST00000396081 HAMPP81172 84 aa12.59□□□□□ -0.39
HERPUD2-202ENST00000396081 FSHBP01225 129 aa12.59□□□□□ -0.39
HERPUD2-202ENST00000396081 ATP5EP2Q5VTU8 51 aa12.59□□□□□ -0.39
HERPUD2-202ENST00000396081 GCN1Q92616 2671 aaKnown RBP12.58□□□□□ -0.4
HERPUD2-202ENST00000396081 GYPEP15421 78 aa12.58□□□□□ -0.4
HERPUD2-202ENST00000396081 Q8IZM0 81 aa12.57□□□□□ -0.4
HERPUD2-202ENST00000396081 NDUFC2O95298 119 aa12.56□□□□□ -0.4
HERPUD2-202ENST00000396081 Q5XG85 94 aa12.56□□□□□ -0.4
HERPUD2-202ENST00000396081 RBM3P98179 157 aaKnown RBP12.55□□□□□ -0.4
HERPUD2-202ENST00000396081 LINC00269Q8N2A0 174 aa12.55□□□□□ -0.4
HERPUD2-202ENST00000396081 LINC00167Q96N53 147 aa12.55□□□□□ -0.4
HERPUD2-202ENST00000396081 FAM236DA0A1B0GTK5 79 aa12.53□□□□□ -0.4
HERPUD2-202ENST00000396081 FAM236CP0DP71 79 aa12.53□□□□□ -0.4
HERPUD2-202ENST00000396081 M0R2N4 97 aa12.53□□□□□ -0.4
HERPUD2-202ENST00000396081 IGSF10Q6WRI0 2623 aa12.53□□□□□ -0.4
HERPUD2-202ENST00000396081 PIEZO1Q92508 2521 aa12.52□□□□□ -0.4
HERPUD2-202ENST00000396081 SNURFQ9Y675 71 aa12.52□□□□□ -0.41
HERPUD2-202ENST00000396081 APCP25054 2843 aa12.52□□□□□ -0.41
HERPUD2-202ENST00000396081 ZNF462Q96JM2 2506 aa12.51□□□□□ -0.41
HERPUD2-202ENST00000396081 ACANP16112 2415 aa12.51□□□□□ -0.41
HERPUD2-202ENST00000396081 Q8NDZ9 215 aa12.51□□□□□ -0.41
HERPUD2-202ENST00000396081 AKAP9Q99996 3911 aa12.5□□□□□ -0.41
HERPUD2-202ENST00000396081 Q8N3U1 123 aa12.5□□□□□ -0.41
HERPUD2-202ENST00000396081 LYPD5Q6UWN5 251 aa12.49□□□□□ -0.41
HERPUD2-202ENST00000396081 ANGP03950 147 aaKnown RBP12.48□□□□□ -0.41
HERPUD2-202ENST00000396081 LINC00575Q6W349 94 aa12.48□□□□□ -0.41
HERPUD2-202ENST00000396081 Q6ZQT0 140 aa12.48□□□□□ -0.41
HERPUD2-202ENST00000396081 CSNK1G2-AS1Q8NCQ2 148 aa12.48□□□□□ -0.41
HERPUD2-202ENST00000396081 ESM1Q9NQ30 184 aa12.48□□□□□ -0.41
HERPUD2-202ENST00000396081 NDUFC2-KCTD14E9PQ53 114 aa12.48□□□□□ -0.41
HERPUD2-202ENST00000396081 KRTAP10-9P60411 292 aa12.48□□□□□ -0.41
HERPUD2-202ENST00000396081 TRAV10A0A0B4J240 114 aa12.48□□□□□ -0.41
HERPUD2-202ENST00000396081 LINC01547P58512 204 aaPredicted RBP12.48□□□□□ -0.41
HERPUD2-202ENST00000396081 SCXQ7RTU7 201 aa12.48□□□□□ -0.41
HERPUD2-202ENST00000396081 CHCHD10Q8WYQ3 142 aaPredicted RBP12.48□□□□□ -0.41
HERPUD2-202ENST00000396081 TRBV10-3A0A0K0K1G6 114 aa12.47□□□□□ -0.41
HERPUD2-202ENST00000396081 BBC3Q96PG8 261 aaPredicted RBP12.47□□□□□ -0.41
HERPUD2-202ENST00000396081 NBPF19A0A087WUL8 3843 aa12.47□□□□□ -0.41
HERPUD2-202ENST00000396081 KIAA0087Q14695 138 aa12.46□□□□□ -0.41
HERPUD2-202ENST00000396081 ZNF843Q8N446 348 aa12.46□□□□□ -0.41
HERPUD2-202ENST00000396081 Q6ZQY7 126 aa12.46□□□□□ -0.41
HERPUD2-202ENST00000396081 Q6ZVQ6 151 aa12.46□□□□□ -0.42
HERPUD2-202ENST00000396081 SPATA3Q8NHX4 192 aa12.46□□□□□ -0.42
HERPUD2-202ENST00000396081 RMI2Q96E14 147 aa12.46□□□□□ -0.42
HERPUD2-202ENST00000396081 TRAV7A0A075B6U4 112 aa12.45□□□□□ -0.42
HERPUD2-202ENST00000396081 DNAJC9-AS1A6NH13 148 aa12.45□□□□□ -0.42
HERPUD2-202ENST00000396081 ZNF561-AS1K7EIQ3 104 aa12.45□□□□□ -0.42
HERPUD2-202ENST00000396081 CMC4P56277 68 aaPredicted RBP12.45□□□□□ -0.42
HERPUD2-202ENST00000396081 A0A1B0GUV1 79 aa12.45□□□□□ -0.42
HERPUD2-202ENST00000396081 HIVEP2P31629 2446 aa12.44□□□□□ -0.42
HERPUD2-202ENST00000396081 H7BZZ5 65 aa12.44□□□□□ -0.42
HERPUD2-202ENST00000396081 CD164L2Q6UWJ8 174 aa12.44□□□□□ -0.42
HERPUD2-202ENST00000396081 C6orf223Q8N319 242 aa12.44□□□□□ -0.42
HERPUD2-202ENST00000396081 LINC01006Q8NI28 216 aa12.43□□□□□ -0.42
HERPUD2-202ENST00000396081 C19orf73Q9NVV2 129 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 789.6 ms