RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 GAGE2DQ9UEU5 116 aa9.83□□□□□ -0.84
CXCL12-206ENST00000395795 TRBV30A0A0K0K1B3 111 aa9.82□□□□□ -0.84
CXCL12-206ENST00000395795 K7EMI3 77 aa9.82□□□□□ -0.84
CXCL12-206ENST00000395795 IGLV7-43P04211 117 aa9.82□□□□□ -0.84
CXCL12-206ENST00000395795 ORMDL2Q53FV1 153 aa9.82□□□□□ -0.84
CXCL12-206ENST00000395795 TRGC2P03986 189 aa9.81□□□□□ -0.84
CXCL12-206ENST00000395795 FAM19A5Q7Z5A7 132 aaPredicted RBP9.81□□□□□ -0.84
CXCL12-206ENST00000395795 NXT2Q9NPJ8 142 aaKnown RBP9.81□□□□□ -0.84
CXCL12-206ENST00000395795 NDUFC2-KCTD14E9PQ53 114 aa9.8□□□□□ -0.84
CXCL12-206ENST00000395795 TOMM6Q96B49 74 aa9.8□□□□□ -0.84
CXCL12-206ENST00000395795 VCX2Q9H322 139 aa9.8□□□□□ -0.84
CXCL12-206ENST00000395795 LINC01546A6NGU7 62 aa9.79□□□□□ -0.84
CXCL12-206ENST00000395795 TIMM17AQ99595 171 aa9.79□□□□□ -0.84
CXCL12-206ENST00000395795 C2orf88Q9BSF0 95 aa9.79□□□□□ -0.84
CXCL12-206ENST00000395795 CDKN2A-AS1Q9UH64 79 aa9.79□□□□□ -0.84
CXCL12-206ENST00000395795 KRTAP1-4P0C5Y4 121 aa9.78□□□□□ -0.84
CXCL12-206ENST00000395795 C18orf32Q8TCD1 76 aa9.78□□□□□ -0.84
CXCL12-206ENST00000395795 Q6ZN92 141 aa9.77□□□□□ -0.85
CXCL12-206ENST00000395795 Q8IZM0 81 aa9.77□□□□□ -0.85
CXCL12-206ENST00000395795 M0QXV9 152 aa9.76□□□□□ -0.85
CXCL12-206ENST00000395795 G0S2P27469 103 aa9.76□□□□□ -0.85
CXCL12-206ENST00000395795 RAB5BP61020 215 aa9.76□□□□□ -0.85
CXCL12-206ENST00000395795 H0Y9J4 135 aa9.75□□□□□ -0.85
CXCL12-206ENST00000395795 FA2HQ7L5A8 372 aa9.75□□□□□ -0.85
CXCL12-206ENST00000395795 PRR26Q8N8Z3 221 aa9.75□□□□□ -0.85
CXCL12-206ENST00000395795 PACRGQ96M98 296 aaPredicted RBP9.75□□□□□ -0.85
CXCL12-206ENST00000395795 IGLV5-45A0A087WSX0 123 aa9.74□□□□□ -0.85
CXCL12-206ENST00000395795 LINC00614P0C842 121 aa9.74□□□□□ -0.85
CXCL12-206ENST00000395795 HERVK_113P63121 156 aa9.74□□□□□ -0.85
CXCL12-206ENST00000395795 ERASQ7Z444 233 aa9.74□□□□□ -0.85
CXCL12-206ENST00000395795 TOMM7Q9P0U1 55 aa9.74□□□□□ -0.85
CXCL12-206ENST00000395795 SMIM1B2RUZ4 78 aa9.73□□□□□ -0.85
CXCL12-206ENST00000395795 DIRC1Q969H9 104 aa9.73□□□□□ -0.85
CXCL12-206ENST00000395795 C6orf226Q5I0X4 101 aa9.72□□□□□ -0.85
CXCL12-206ENST00000395795 BAGE3Q86Y29 109 aa9.72□□□□□ -0.85
CXCL12-206ENST00000395795 LINC00469Q8N7U9 141 aa9.72□□□□□ -0.85
CXCL12-206ENST00000395795 XAGE1AQ9HD64 81 aa9.72□□□□□ -0.85
CXCL12-206ENST00000395795 LINC01549A6NIU2 74 aa9.71□□□□□ -0.86
CXCL12-206ENST00000395795 PAPPA-AS1Q5QFB9 102 aa9.71□□□□□ -0.86
CXCL12-206ENST00000395795 SCGB3A1Q96QR1 104 aa9.71□□□□□ -0.86
CXCL12-206ENST00000395795 TINCRA0A1B0GVN0 87 aa9.7□□□□□ -0.86
CXCL12-206ENST00000395795 PRSS2P07478 247 aa9.7□□□□□ -0.86
CXCL12-206ENST00000395795 CKS1BP61024 79 aa9.7□□□□□ -0.86
CXCL12-206ENST00000395795 SEC11AP67812 179 aa9.7□□□□□ -0.86
CXCL12-206ENST00000395795 CHCHD1Q96BP2 118 aaKnown RBP9.7□□□□□ -0.86
CXCL12-206ENST00000395795 URB1-AS1Q96HZ7 61 aa9.7□□□□□ -0.86
CXCL12-206ENST00000395795 CST9LQ9H4G1 147 aa9.7□□□□□ -0.86
CXCL12-206ENST00000395795 C22orf24Q9Y442 160 aa9.7□□□□□ -0.86
CXCL12-206ENST00000395795 LPAP08519 4548 aa9.7□□□□□ -0.86
CXCL12-206ENST00000395795 A0A096LNJ9 63 aa9.69□□□□□ -0.86
CXCL12-206ENST00000395795 F8VRH5 84 aa9.69□□□□□ -0.86
CXCL12-206ENST00000395795 GEMIN7Q9H840 131 aaKnown RBP9.69□□□□□ -0.86
CXCL12-206ENST00000395795 HIST1H2BKO60814 126 aa9.68□□□□□ -0.86
CXCL12-206ENST00000395795 HIST1H2BJP06899 126 aa9.68□□□□□ -0.86
CXCL12-206ENST00000395795 HIST1H2BOP23527 126 aa9.68□□□□□ -0.86
CXCL12-206ENST00000395795 HIST1H2BBP33778 126 aa9.68□□□□□ -0.86
CXCL12-206ENST00000395795 HIST1H2BDP58876 126 aa9.68□□□□□ -0.86
CXCL12-206ENST00000395795 HIST1H2BCP62807 126 aa9.68□□□□□ -0.86
CXCL12-206ENST00000395795 UBE2BP63146 152 aa9.68□□□□□ -0.86
CXCL12-206ENST00000395795 HIST2H2BEQ16778 126 aa9.68□□□□□ -0.86
CXCL12-206ENST00000395795 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.68□□□□□ -0.86
CXCL12-206ENST00000395795 HIST1H2BHQ93079 126 aa9.68□□□□□ -0.86
CXCL12-206ENST00000395795 HIST1H2BNQ99877 126 aa9.68□□□□□ -0.86
CXCL12-206ENST00000395795 HIST1H2BMQ99879 126 aa9.68□□□□□ -0.86
CXCL12-206ENST00000395795 PDZD11Q5EBL8 140 aa9.67□□□□□ -0.86
CXCL12-206ENST00000395795 RNF213Q63HN8 5207 aa9.67□□□□□ -0.86
CXCL12-206ENST00000395795 IGLV1-50A0A075B6I6 118 aa9.65□□□□□ -0.86
CXCL12-206ENST00000395795 ZNF861PO60384 105 aa9.65□□□□□ -0.86
CXCL12-206ENST00000395795 HSBP1O75506 76 aa9.65□□□□□ -0.86
CXCL12-206ENST00000395795 HBDP02042 147 aa9.65□□□□□ -0.86
CXCL12-206ENST00000395795 CXCL5P42830 114 aa9.65□□□□□ -0.86
CXCL12-206ENST00000395795 COX7B2Q8TF08 81 aa9.65□□□□□ -0.86
CXCL12-206ENST00000395795 TP73-AS1Q9UF72 201 aa9.65□□□□□ -0.86
CXCL12-206ENST00000395795 SERF1AO75920 110 aa9.64□□□□□ -0.87
CXCL12-206ENST00000395795 SPINK8P0C7L1 97 aa9.64□□□□□ -0.87
CXCL12-206ENST00000395795 PMVKQ15126 192 aa9.64□□□□□ -0.87
CXCL12-206ENST00000395795 PMCHL1Q16048 86 aa9.63□□□□□ -0.87
CXCL12-206ENST00000395795 IGLV5-39A0A0G2JS06 123 aa9.62□□□□□ -0.87
CXCL12-206ENST00000395795 IGLC3P0DOY3 106 aa9.62□□□□□ -0.87
CXCL12-206ENST00000395795 NDUFA6P56556 154 aa9.62□□□□□ -0.87
CXCL12-206ENST00000395795 LINC00310P59036 64 aa9.62□□□□□ -0.87
CXCL12-206ENST00000395795 MRPL55Q7Z7F7 128 aaKnown RBP9.62□□□□□ -0.87
CXCL12-206ENST00000395795 IGLV5-37A0A075B6J1 123 aa9.61□□□□□ -0.87
CXCL12-206ENST00000395795 NUPR1O60356 82 aa9.61□□□□□ -0.87
CXCL12-206ENST00000395795 LINC00167Q96N53 147 aa9.61□□□□□ -0.87
CXCL12-206ENST00000395795 ATP5LO75964 103 aa9.6□□□□□ -0.87
CXCL12-206ENST00000395795 LBHQ53QV2 105 aaPredicted RBP9.6□□□□□ -0.87
CXCL12-206ENST00000395795 COA6Q5JTJ3 125 aaKnown RBP9.6□□□□□ -0.87
CXCL12-206ENST00000395795 FAM19A2Q8N3H0 131 aa9.6□□□□□ -0.87
CXCL12-206ENST00000395795 ZNF22P17026 224 aaPredicted RBP9.59□□□□□ -0.87
CXCL12-206ENST00000395795 KRTAP13-1Q8IUC0 172 aa9.59□□□□□ -0.87
CXCL12-206ENST00000395795 BCE1O60756 84 aa9.58□□□□□ -0.88
CXCL12-206ENST00000395795 A0A087X002 238 aa9.57□□□□□ -0.88
CXCL12-206ENST00000395795 RPL37AP8A6NKH3 93 aa9.57□□□□□ -0.88
CXCL12-206ENST00000395795 LEPROTL1O95214 131 aa9.57□□□□□ -0.88
CXCL12-206ENST00000395795 Q8NDZ9 215 aa9.56□□□□□ -0.88
CXCL12-206ENST00000395795 GAGE10A6NGK3 116 aa9.55□□□□□ -0.88
CXCL12-206ENST00000395795 S100A6P06703 90 aa9.55□□□□□ -0.88
CXCL12-206ENST00000395795 IFI27L1Q96BM0 104 aa9.55□□□□□ -0.88
CXCL12-206ENST00000395795 HSPB8Q9UJY1 196 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms