RNA–Protein interactions for RNA: ENST00000395377.2

TFAM-203, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2

Gene TFAM, Length 663 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-203ENST00000395377 SNHG12Q9BXW3 62 aa0.35□□□□□ -2.35
TFAM-203ENST00000395377 CEP162Q5TB80 1403 aa0.35□□□□□ -2.35
TFAM-203ENST00000395377 MED14O60244 1454 aa0.35□□□□□ -2.35
TFAM-203ENST00000395377 NLRP1Q9C000 1473 aa0.35□□□□□ -2.35
TFAM-203ENST00000395377 TRBV7-7A0A0K0K1E9 115 aa0.34□□□□□ -2.36
TFAM-203ENST00000395377 BAZ1AQ9NRL2 1556 aaPredicted RBP0.34□□□□□ -2.36
TFAM-203ENST00000395377 V9GYS6 101 aa0.34□□□□□ -2.36
TFAM-203ENST00000395377 MUC5ACP98088 5654 aa0.34□□□□□ -2.36
TFAM-203ENST00000395377 CSMD3Q7Z407 3707 aa0.34□□□□□ -2.36
TFAM-203ENST00000395377 MAGI2Q86UL8 1455 aa0.34□□□□□ -2.36
TFAM-203ENST00000395377 PLEKHH2Q8IVE3 1493 aa0.34□□□□□ -2.36
TFAM-203ENST00000395377 MARF1Q9Y4F3 1742 aaKnown RBP0.33□□□□□ -2.36
TFAM-203ENST00000395377 SYS1-DBNDD2H3BUS1 97 aa0.33□□□□□ -2.36
TFAM-203ENST00000395377 GYPAP02724 150 aa0.33□□□□□ -2.36
TFAM-203ENST00000395377 DEFB107AQ8IZN7 70 aa0.33□□□□□ -2.36
TFAM-203ENST00000395377 C9orf62Q8N4C0 152 aa0.33□□□□□ -2.36
TFAM-203ENST00000395377 CCDC18Q5T9S5 1454 aa0.33□□□□□ -2.36
TFAM-203ENST00000395377 ARHGAP35Q9NRY4 1499 aa0.33□□□□□ -2.36
TFAM-203ENST00000395377 NRXN1Q9ULB1 1477 aa0.33□□□□□ -2.36
TFAM-203ENST00000395377 ABCC2Q92887 1545 aa0.33□□□□□ -2.36
TFAM-203ENST00000395377 ANKRD26Q9UPS8 1709 aa0.33□□□□□ -2.36
TFAM-203ENST00000395377 MYO7BQ6PIF6 2116 aa0.32□□□□□ -2.36
TFAM-203ENST00000395377 H3BQF6 201 aa0.32□□□□□ -2.36
TFAM-203ENST00000395377 ATP10BO94823 1461 aa0.32□□□□□ -2.36
TFAM-203ENST00000395377 LRRC9Q6ZRR7 1453 aa0.32□□□□□ -2.36
TFAM-203ENST00000395377 PPRC1Q5VV67 1664 aaKnown RBP0.32□□□□□ -2.36
TFAM-203ENST00000395377 UACAQ9BZF9 1416 aa0.31□□□□□ -2.36
TFAM-203ENST00000395377 RRBP1Q9P2E9 1410 aaKnown RBP0.31□□□□□ -2.36
TFAM-203ENST00000395377 SPRR1BP22528 89 aa0.31□□□□□ -2.36
TFAM-203ENST00000395377 Q9H521 79 aa0.31□□□□□ -2.36
TFAM-203ENST00000395377 RABAC1Q9UI14 185 aa0.31□□□□□ -2.36
TFAM-203ENST00000395377 MACF1Q9UPN3 7388 aaKnown RBP0.31□□□□□ -2.36
TFAM-203ENST00000395377 MYO3AQ8NEV4 1616 aa0.31□□□□□ -2.36
TFAM-203ENST00000395377 PLIN4Q96Q06 1357 aa0.31□□□□□ -2.36
TFAM-203ENST00000395377 MAP3K4Q9Y6R4 1608 aa0.31□□□□□ -2.36
TFAM-203ENST00000395377 NCOR2Q9Y618 2525 aa0.3□□□□□ -2.36
TFAM-203ENST00000395377 PLCE1Q9P212 2302 aa0.3□□□□□ -2.36
TFAM-203ENST00000395377 CUX1P39880 1505 aa0.3□□□□□ -2.36
TFAM-203ENST00000395377 MAP3K1Q13233 1512 aa0.3□□□□□ -2.36
TFAM-203ENST00000395377 KDM5DQ9BY66 1539 aa0.3□□□□□ -2.36
TFAM-203ENST00000395377 A0A1B0GU69 56 aa0.3□□□□□ -2.36
TFAM-203ENST00000395377 K7EP34 96 aa0.3□□□□□ -2.36
TFAM-203ENST00000395377 HMGN3Q15651 99 aa0.3□□□□□ -2.36
TFAM-203ENST00000395377 PYY3Q5JQD4 70 aa0.3□□□□□ -2.36
TFAM-203ENST00000395377 SYNE2Q8WXH0 6885 aaKnown RBP0.3□□□□□ -2.36
TFAM-203ENST00000395377 ERVK-7P63135 1459 aa0.29□□□□□ -2.36
TFAM-203ENST00000395377 HRNRQ86YZ3 2850 aaPredicted RBP0.29□□□□□ -2.36
TFAM-203ENST00000395377 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.29□□□□□ -2.365e-8■■■■■ 28.6
TFAM-203ENST00000395377 DCAF1Q9Y4B6 1507 aa0.29□□□□□ -2.36
TFAM-203ENST00000395377 CFAP74Q9C0B2 1584 aa0.29□□□□□ -2.36
TFAM-203ENST00000395377 SETBP1Q9Y6X0 1596 aa0.29□□□□□ -2.36
TFAM-203ENST00000395377 UQCRHLA0A096LP55 91 aa0.29□□□□□ -2.36
TFAM-203ENST00000395377 H0Y9P7 68 aa0.29□□□□□ -2.36
TFAM-203ENST00000395377 K7EQZ3 153 aa0.29□□□□□ -2.36
TFAM-203ENST00000395377 C6orf201Q7Z4U5 140 aa0.29□□□□□ -2.36
TFAM-203ENST00000395377 KIAA1551Q9HCM1 1747 aa0.29□□□□□ -2.36
TFAM-203ENST00000395377 AKAP12Q02952 1782 aa0.29□□□□□ -2.36
TFAM-203ENST00000395377 EDC4Q6P2E9 1401 aaKnown RBP0.29□□□□□ -2.36
TFAM-203ENST00000395377 NCOA2Q15596 1464 aa0.29□□□□□ -2.36
TFAM-203ENST00000395377 ABCC1P33527 1531 aa0.28□□□□□ -2.36
TFAM-203ENST00000395377 KIF14Q15058 1648 aa0.28□□□□□ -2.36
TFAM-203ENST00000395377 CLTCQ00610 1675 aaKnown RBP0.28□□□□□ -2.36
TFAM-203ENST00000395377 NUP188Q5SRE5 1749 aa0.28□□□□□ -2.36
TFAM-203ENST00000395377 GOLGA4Q13439 2230 aaKnown RBP0.28□□□□□ -2.36
TFAM-203ENST00000395377 CYB5AP00167 134 aa0.28□□□□□ -2.36
TFAM-203ENST00000395377 ACYP1P07311 99 aa0.28□□□□□ -2.36
TFAM-203ENST00000395377 ARMS2P0C7Q2 107 aa0.28□□□□□ -2.36
TFAM-203ENST00000395377 SMIM11AP58511 58 aa0.28□□□□□ -2.36
TFAM-203ENST00000395377 SNRPFP62306 86 aaKnown RBP0.28□□□□□ -2.36
TFAM-203ENST00000395377 ALKAL2Q6UX46 152 aa0.28□□□□□ -2.36
TFAM-203ENST00000395377 ZNF720Q7Z2F6 126 aa0.28□□□□□ -2.36
TFAM-203ENST00000395377 C20orf78Q9BR46 151 aa0.28□□□□□ -2.36
TFAM-203ENST00000395377 CCDC88BA6NC98 1476 aa0.28□□□□□ -2.37
TFAM-203ENST00000395377 DIP2BQ9P265 1576 aa0.28□□□□□ -2.37
TFAM-203ENST00000395377 USF3Q68DE3 2245 aa0.28□□□□□ -2.37
TFAM-203ENST00000395377 PTPN23Q9H3S7 1636 aa0.27□□□□□ -2.37
TFAM-203ENST00000395377 MON2Q7Z3U7 1717 aa0.27□□□□□ -2.37
TFAM-203ENST00000395377 HMGN2P05204 90 aaKnown RBP0.27□□□□□ -2.37
TFAM-203ENST00000395377 GNGT1P63211 74 aa0.27□□□□□ -2.37
TFAM-203ENST00000395377 PEA15Q15121 130 aa0.27□□□□□ -2.37
TFAM-203ENST00000395377 ETDBQ3ZM63 59 aa0.27□□□□□ -2.37
TFAM-203ENST00000395377 LINC00643Q86TS7 51 aa0.27□□□□□ -2.37
TFAM-203ENST00000395377 S100A16Q96FQ6 103 aaKnown RBP0.27□□□□□ -2.37
TFAM-203ENST00000395377 S100A13Q99584 98 aa0.27□□□□□ -2.37
TFAM-203ENST00000395377 ANKARQ7Z5J8 1434 aa0.27□□□□□ -2.37
TFAM-203ENST00000395377 NKTRP30414 1462 aaKnown RBP0.27□□□□□ -2.37
TFAM-203ENST00000395377 ATP7BP35670 1465 aa0.27□□□□□ -2.37
TFAM-203ENST00000395377 ABCA8O94911 1581 aa0.27□□□□□ -2.37
TFAM-203ENST00000395377 SAMD9Q5K651 1589 aa0.27□□□□□ -2.37
TFAM-203ENST00000395377 IGSF10Q6WRI0 2623 aa0.27□□□□□ -2.37
TFAM-203ENST00000395377 ALKQ9UM73 1620 aa0.27□□□□□ -2.37
TFAM-203ENST00000395377 SHPRHQ149N8 1683 aa0.27□□□□□ -2.37
TFAM-203ENST00000395377 AKAP6Q13023 2319 aa0.26□□□□□ -2.37
TFAM-203ENST00000395377 FSIP2Q5CZC0 6907 aa0.26□□□□□ -2.37
TFAM-203ENST00000395377 CELSR1Q9NYQ6 3014 aa0.26□□□□□ -2.37
TFAM-203ENST00000395377 KANTRA0A1W2PQU2 76 aa0.26□□□□□ -2.37
TFAM-203ENST00000395377 NMSQ5H8A3 153 aa0.26□□□□□ -2.37
TFAM-203ENST00000395377 ATP5EP2Q5VTU8 51 aa0.26□□□□□ -2.37
TFAM-203ENST00000395377 ST20Q9HBF5 79 aa0.26□□□□□ -2.37
TFAM-203ENST00000395377 HIGD1BQ9P298 99 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms