RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 RNF151Q2KHN1 245 aa9.5□□□□□ -0.89
CDC42SE2-202ENST00000395246 NTN5Q8WTR8 489 aaPredicted RBP9.5□□□□□ -0.89
CDC42SE2-202ENST00000395246 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
CDC42SE2-202ENST00000395246 JMJD1CQ15652 2540 aa9.5□□□□□ -0.89
CDC42SE2-202ENST00000395246 C2orf48Q96LS8 159 aa9.5□□□□□ -0.89
CDC42SE2-202ENST00000395246 NANOS2P60321 138 aaKnown RBP9.49□□□□□ -0.89
CDC42SE2-202ENST00000395246 SPCS1Q9Y6A9 102 aa9.49□□□□□ -0.89
CDC42SE2-202ENST00000395246 CSMD3Q7Z407 3707 aa9.49□□□□□ -0.89
CDC42SE2-202ENST00000395246 MEIG1Q5JSS6 88 aa9.48□□□□□ -0.89
CDC42SE2-202ENST00000395246 Q8N3U1 123 aa9.48□□□□□ -0.89
CDC42SE2-202ENST00000395246 IGKV2-28A0A075B6P5 120 aa9.48□□□□□ -0.89
CDC42SE2-202ENST00000395246 IGKV2D-28P01615 120 aa9.48□□□□□ -0.89
CDC42SE2-202ENST00000395246 VAMP3Q15836 100 aa9.48□□□□□ -0.89
CDC42SE2-202ENST00000395246 ERG28Q9UKR5 140 aa9.48□□□□□ -0.89
CDC42SE2-202ENST00000395246 RPL28P46779 137 aaKnown RBP9.47□□□□□ -0.89
CDC42SE2-202ENST00000395246 WFDC10BQ8IUB3 73 aa9.47□□□□□ -0.89
CDC42SE2-202ENST00000395246 APOMO95445 188 aa9.46□□□□□ -0.9
CDC42SE2-202ENST00000395246 ANGP03950 147 aaKnown RBP9.46□□□□□ -0.9
CDC42SE2-202ENST00000395246 TLX1NBP0CAT3 122 aa9.45□□□□□ -0.9
CDC42SE2-202ENST00000395246 TMEM262E9PQX1 116 aa9.44□□□□□ -0.9
CDC42SE2-202ENST00000395246 C15orf56Q8N910 161 aa9.44□□□□□ -0.9
CDC42SE2-202ENST00000395246 RAB37Q96AX2 223 aa9.44□□□□□ -0.9
CDC42SE2-202ENST00000395246 H3BMG7 143 aa9.44□□□□□ -0.9
CDC42SE2-202ENST00000395246 LINC00588Q9Y4M8 146 aa9.44□□□□□ -0.9
CDC42SE2-202ENST00000395246 TRAV13-2A0A0B4J235 113 aa9.43□□□□□ -0.9
CDC42SE2-202ENST00000395246 XCL1P47992 114 aa9.43□□□□□ -0.9
CDC42SE2-202ENST00000395246 SMCPP49901 116 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE2-202ENST00000395246 CCL18P55774 89 aa9.43□□□□□ -0.9
CDC42SE2-202ENST00000395246 LINC00167Q96N53 147 aa9.43□□□□□ -0.9
CDC42SE2-202ENST00000395246 APLNQ9ULZ1 77 aa9.43□□□□□ -0.9
CDC42SE2-202ENST00000395246 COL7A1Q02388 2944 aa9.43□□□□□ -0.9
CDC42SE2-202ENST00000395246 CARD19Q96LW7 228 aa9.43□□□□□ -0.9
CDC42SE2-202ENST00000395246 NOTCH3Q9UM47 2321 aa9.42□□□□□ -0.9
CDC42SE2-202ENST00000395246 GAGE12HA6NDE8 117 aa9.42□□□□□ -0.9
CDC42SE2-202ENST00000395246 TCL1BO95988 128 aa9.42□□□□□ -0.9
CDC42SE2-202ENST00000395246 C5orf38Q86SI9 138 aa9.42□□□□□ -0.9
CDC42SE2-202ENST00000395246 TRBV10-2A0A0K0K1G8 114 aa9.42□□□□□ -0.9
CDC42SE2-202ENST00000395246 TRIAP1O43715 76 aa9.42□□□□□ -0.9
CDC42SE2-202ENST00000395246 PLA2G2DQ9UNK4 145 aa9.42□□□□□ -0.9
CDC42SE2-202ENST00000395246 LST1O00453 97 aa9.41□□□□□ -0.9
CDC42SE2-202ENST00000395246 DEFB121Q5J5C9 76 aa9.41□□□□□ -0.9
CDC42SE2-202ENST00000395246 MIR7-3HGQ8N6C7 128 aa9.41□□□□□ -0.9
CDC42SE2-202ENST00000395246 TENM3Q9P273 2699 aa9.4□□□□□ -0.9
CDC42SE2-202ENST00000395246 FLNBO75369 2602 aaKnown RBP9.4□□□□□ -0.9
CDC42SE2-202ENST00000395246 PLECQ15149 4684 aaKnown RBP9.4□□□□□ -0.9
CDC42SE2-202ENST00000395246 C2orf82Q6UX34 121 aa9.39□□□□□ -0.91
CDC42SE2-202ENST00000395246 KLK12Q9UKR0 248 aa9.39□□□□□ -0.91
CDC42SE2-202ENST00000395246 LYSTQ99698 3801 aa9.39□□□□□ -0.91
CDC42SE2-202ENST00000395246 A0A1B0GX51 115 aa9.39□□□□□ -0.91
CDC42SE2-202ENST00000395246 LINC00337Q8N6G1 96 aa9.39□□□□□ -0.91
CDC42SE2-202ENST00000395246 C6orf226Q5I0X4 101 aa9.38□□□□□ -0.91
CDC42SE2-202ENST00000395246 SETD2Q9BYW2 2564 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE2-202ENST00000395246 RPL13AP40429 203 aaKnown RBP9.38□□□□□ -0.91
CDC42SE2-202ENST00000395246 TRACP01848 142 aa9.37□□□□□ -0.91
CDC42SE2-202ENST00000395246 IGLV5-37A0A075B6J1 123 aa9.37□□□□□ -0.91
CDC42SE2-202ENST00000395246 ATXN8Q156A1 80 aa9.37□□□□□ -0.91
CDC42SE2-202ENST00000395246 STAB1Q9NY15 2570 aa9.37□□□□□ -0.91
CDC42SE2-202ENST00000395246 ALMS1Q8TCU4 4167 aa9.37□□□□□ -0.91
CDC42SE2-202ENST00000395246 NBEAL2Q6ZNJ1 2754 aa9.36□□□□□ -0.91
CDC42SE2-202ENST00000395246 C6orf48Q9UBA6 75 aa9.36□□□□□ -0.91
CDC42SE2-202ENST00000395246 IGLV6-57P01721 117 aa9.36□□□□□ -0.91
CDC42SE2-202ENST00000395246 HTN3P15516 51 aa9.36□□□□□ -0.91
CDC42SE2-202ENST00000395246 OCIAD2Q56VL3 154 aa9.36□□□□□ -0.91
CDC42SE2-202ENST00000395246 SND1-IT1Q9HBX3 110 aa9.36□□□□□ -0.91
CDC42SE2-202ENST00000395246 SPAG11BQ08648 103 aa9.35□□□□□ -0.91
CDC42SE2-202ENST00000395246 STARD9Q9P2P6 4700 aa9.35□□□□□ -0.91
CDC42SE2-202ENST00000395246 TRBV7-6A0A0J9YX20 115 aa9.35□□□□□ -0.91
CDC42SE2-202ENST00000395246 NAA38Q9BRA0 125 aaKnown RBP9.35□□□□□ -0.91
CDC42SE2-202ENST00000395246 H3BT86 120 aa9.35□□□□□ -0.91
CDC42SE2-202ENST00000395246 CRPP02741 224 aa9.35□□□□□ -0.91
CDC42SE2-202ENST00000395246 DAND5Q8N907 189 aa9.35□□□□□ -0.91
CDC42SE2-202ENST00000395246 C10orf25Q5T742 122 aa9.33□□□□□ -0.92
CDC42SE2-202ENST00000395246 CFAP161Q6P656 301 aa9.33□□□□□ -0.92
CDC42SE2-202ENST00000395246 DNHD1Q96M86 4753 aa9.33□□□□□ -0.92
CDC42SE2-202ENST00000395246 CKS1BP61024 79 aa9.33□□□□□ -0.92
CDC42SE2-202ENST00000395246 MALP21145 153 aa9.33□□□□□ -0.92
CDC42SE2-202ENST00000395246 Q8NDZ9 215 aa9.33□□□□□ -0.92
CDC42SE2-202ENST00000395246 OBSCN-AS1Q96MR7 158 aa9.33□□□□□ -0.92
CDC42SE2-202ENST00000395246 C22orf24Q9Y442 160 aa9.33□□□□□ -0.92
CDC42SE2-202ENST00000395246 EPM2AB3EWF7 344 aa9.32□□□□□ -0.92
CDC42SE2-202ENST00000395246 DNAH10Q8IVF4 4471 aa9.32□□□□□ -0.92
CDC42SE2-202ENST00000395246 DNAH2Q9P225 4427 aa9.32□□□□□ -0.92
CDC42SE2-202ENST00000395246 LINC01620Q4KN68 170 aa9.32□□□□□ -0.92
CDC42SE2-202ENST00000395246 CLPSL2Q6UWE3 100 aa9.32□□□□□ -0.92
CDC42SE2-202ENST00000395246 NUPR2A6NF83 97 aa9.31□□□□□ -0.92
CDC42SE2-202ENST00000395246 H0YGX0 51 aa9.31□□□□□ -0.92
CDC42SE2-202ENST00000395246 MRAPQ8TCY5 172 aa9.31□□□□□ -0.92
CDC42SE2-202ENST00000395246 RMI2Q96E14 147 aa9.31□□□□□ -0.92
CDC42SE2-202ENST00000395246 COX6CP09669 75 aa9.3□□□□□ -0.92
CDC42SE2-202ENST00000395246 UNQ6190/PRO20217Q6UXQ8 127 aa9.3□□□□□ -0.92
CDC42SE2-202ENST00000395246 TEN1Q86WV5 123 aa9.3□□□□□ -0.92
CDC42SE2-202ENST00000395246 FRAS1Q86XX4 4008 aa9.3□□□□□ -0.92
CDC42SE2-202ENST00000395246 CNBPP62633 177 aaKnown RBP9.3□□□□□ -0.92
CDC42SE2-202ENST00000395246 LINC00158P58513 81 aa9.29□□□□□ -0.92
CDC42SE2-202ENST00000395246 WFDC2Q14508 124 aa9.29□□□□□ -0.92
CDC42SE2-202ENST00000395246 UBE2WQ96B02 151 aa9.29□□□□□ -0.92
CDC42SE2-202ENST00000395246 NDUFC2-KCTD14E9PQ53 114 aa9.29□□□□□ -0.92
CDC42SE2-202ENST00000395246 PRB2P02812 416 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE2-202ENST00000395246 C6orf223Q8N319 242 aa9.29□□□□□ -0.92
CDC42SE2-202ENST00000395246 IGLV10-54A0A075B6I4 117 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms