RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 ODF3L2Q3SX64 289 aa12.34□□□□□ -0.43
SIN3A-203ENST00000394949 FAM30AQ9NZY2 134 aa12.34□□□□□ -0.43
SIN3A-203ENST00000394949 EGFEM1PQ0D2K5 195 aa12.33□□□□□ -0.44
SIN3A-203ENST00000394949 CASC2Q6XLA1 102 aa12.33□□□□□ -0.44
SIN3A-203ENST00000394949 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.33□□□□□ -0.44
SIN3A-203ENST00000394949 PRR4Q16378 134 aa12.32□□□□□ -0.44
SIN3A-203ENST00000394949 LINC01561Q8N1V8 128 aa12.32□□□□□ -0.44
SIN3A-203ENST00000394949 A0A096LNI7 61 aa12.32□□□□□ -0.44
SIN3A-203ENST00000394949 Q8N9L7 120 aa12.31□□□□□ -0.44
SIN3A-203ENST00000394949 PPDPFQ9H3Y8 114 aa12.31□□□□□ -0.44
SIN3A-203ENST00000394949 FASNP49327 2511 aaKnown RBP12.31□□□□□ -0.44
SIN3A-203ENST00000394949 PLA2G2AP14555 144 aa12.31□□□□□ -0.44
SIN3A-203ENST00000394949 UNQ6190/PRO20217Q6UXQ8 127 aa12.31□□□□□ -0.44
SIN3A-203ENST00000394949 EDN2P20800 178 aa12.31□□□□□ -0.44
SIN3A-203ENST00000394949 RPS28P62857 69 aaKnown RBP12.31□□□□□ -0.44
SIN3A-203ENST00000394949 SPTBN4Q9H254 2564 aa12.31□□□□□ -0.44
SIN3A-203ENST00000394949 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.3□□□□□ -0.44
SIN3A-203ENST00000394949 IGLV4-60A0A075B6I1 120 aa12.3□□□□□ -0.44
SIN3A-203ENST00000394949 IGLV5-39A0A0G2JS06 123 aa12.3□□□□□ -0.44
SIN3A-203ENST00000394949 SOSTDC1Q6X4U4 206 aa12.29□□□□□ -0.44
SIN3A-203ENST00000394949 CELA1Q9UNI1 258 aa12.29□□□□□ -0.44
SIN3A-203ENST00000394949 BCE1O60756 84 aa12.29□□□□□ -0.44
SIN3A-203ENST00000394949 AGRNO00468 2067 aa12.29□□□□□ -0.44
SIN3A-203ENST00000394949 MTORP42345 2549 aa12.28□□□□□ -0.44
SIN3A-203ENST00000394949 Q6ZVQ6 151 aa12.28□□□□□ -0.44
SIN3A-203ENST00000394949 TMEM254Q8TBM7 123 aa12.28□□□□□ -0.44
SIN3A-203ENST00000394949 LINC00337Q8N6G1 96 aa12.27□□□□□ -0.44
SIN3A-203ENST00000394949 A0A1B0GUV1 79 aa12.27□□□□□ -0.45
SIN3A-203ENST00000394949 CXCL6P80162 114 aa12.26□□□□□ -0.45
SIN3A-203ENST00000394949 C1orf137Q5JT78 98 aa12.26□□□□□ -0.45
SIN3A-203ENST00000394949 C7orf33Q8WU49 177 aa12.26□□□□□ -0.45
SIN3A-203ENST00000394949 KRTAP10-9P60411 292 aa12.26□□□□□ -0.45
SIN3A-203ENST00000394949 LINC00575Q6W349 94 aa12.26□□□□□ -0.45
SIN3A-203ENST00000394949 LINC00315P59091 139 aa12.26□□□□□ -0.45
SIN3A-203ENST00000394949 IGHV4-30-4P0DP06 118 aa12.26□□□□□ -0.45
SIN3A-203ENST00000394949 IGLV1-51P01701 117 aa12.25□□□□□ -0.45
SIN3A-203ENST00000394949 Q6ZSN1 163 aa12.25□□□□□ -0.45
SIN3A-203ENST00000394949 A0A1W2PPR1 153 aa12.25□□□□□ -0.45
SIN3A-203ENST00000394949 LINC01547P58512 204 aaPredicted RBP12.25□□□□□ -0.45
SIN3A-203ENST00000394949 PRR3P79522 188 aaKnown RBP12.25□□□□□ -0.45
SIN3A-203ENST00000394949 PRO0628Q9UI54 55 aa12.24□□□□□ -0.45
SIN3A-203ENST00000394949 EXPH5Q8NEV8 1989 aa12.24□□□□□ -0.45
SIN3A-203ENST00000394949 FHL2Q14192 279 aa12.24□□□□□ -0.45
SIN3A-203ENST00000394949 C9orf116Q5BN46 136 aaPredicted RBP12.24□□□□□ -0.45
SIN3A-203ENST00000394949 K7ERS5 55 aa12.24□□□□□ -0.45
SIN3A-203ENST00000394949 PMAIP1Q13794 54 aa12.24□□□□□ -0.45
SIN3A-203ENST00000394949 OXLD1Q5BKU9 147 aa12.24□□□□□ -0.45
SIN3A-203ENST00000394949 ZNF706Q9Y5V0 76 aaPredicted RBP12.23□□□□□ -0.45
SIN3A-203ENST00000394949 LRCOL1A6NCL2 159 aa12.22□□□□□ -0.45
SIN3A-203ENST00000394949 LINC00208Q96KT6 92 aa12.22□□□□□ -0.45
SIN3A-203ENST00000394949 TRBV7-6A0A0J9YX20 115 aa12.21□□□□□ -0.45
SIN3A-203ENST00000394949 RPL37AP8A6NKH3 93 aa12.21□□□□□ -0.45
SIN3A-203ENST00000394949 FAM19A4Q96LR4 140 aa12.21□□□□□ -0.45
SIN3A-203ENST00000394949 F8WDY8 70 aa12.21□□□□□ -0.45
SIN3A-203ENST00000394949 A0A0J9YWU9 116 aa12.21□□□□□ -0.46
SIN3A-203ENST00000394949 IGLV5-45A0A087WSX0 123 aa12.2□□□□□ -0.46
SIN3A-203ENST00000394949 ADAMTS20P59510 1910 aa12.2□□□□□ -0.46
SIN3A-203ENST00000394949 TET2Q6N021 2002 aaPredicted RBP12.19□□□□□ -0.46
SIN3A-203ENST00000394949 ESRGQ1W209 222 aa12.18□□□□□ -0.46
SIN3A-203ENST00000394949 NANOS2P60321 138 aaKnown RBP12.18□□□□□ -0.46
SIN3A-203ENST00000394949 C16orf95Q9H693 158 aa12.16□□□□□ -0.46
SIN3A-203ENST00000394949 SMR3AQ99954 134 aa12.16□□□□□ -0.46
SIN3A-203ENST00000394949 LINC00474Q9P2X8 69 aa12.16□□□□□ -0.46
SIN3A-203ENST00000394949 Q8N2B8 174 aa12.15□□□□□ -0.46
SIN3A-203ENST00000394949 C10orf25Q5T742 122 aa12.14□□□□□ -0.47
SIN3A-203ENST00000394949 C2orf48Q96LS8 159 aa12.14□□□□□ -0.47
SIN3A-203ENST00000394949 M0R2N4 97 aa12.13□□□□□ -0.47
SIN3A-203ENST00000394949 IGHV3OR16-9A0A0B4J2B5 98 aa12.13□□□□□ -0.47
SIN3A-203ENST00000394949 C11orf72Q8NBR9 251 aa12.13□□□□□ -0.47
SIN3A-203ENST00000394949 hDV103S1A0JD37 113 aa12.11□□□□□ -0.47
SIN3A-203ENST00000394949 PSPHP1O15172 72 aa12.1□□□□□ -0.47
SIN3A-203ENST00000394949 REG3GQ6UW15 175 aa12.1□□□□□ -0.47
SIN3A-203ENST00000394949 PLAC8L1A1L4L8 177 aa12.1□□□□□ -0.47
SIN3A-203ENST00000394949 LY6G6CO95867 125 aa12.09□□□□□ -0.47
SIN3A-203ENST00000394949 POLQO75417 2590 aa12.09□□□□□ -0.47
SIN3A-203ENST00000394949 FAM218AQ96MZ4 157 aa12.08□□□□□ -0.48
SIN3A-203ENST00000394949 RAI1Q7Z5J4 1906 aaPredicted RBP12.08□□□□□ -0.48
SIN3A-203ENST00000394949 HCG22E2RYF7 251 aa12.08□□□□□ -0.48
SIN3A-203ENST00000394949 SPINK6Q6UWN8 80 aa12.07□□□□□ -0.48
SIN3A-203ENST00000394949 NUPR2A6NF83 97 aa12.07□□□□□ -0.48
SIN3A-203ENST00000394949 C6orf223Q8N319 242 aa12.07□□□□□ -0.48
SIN3A-203ENST00000394949 A0A1B0GW54 56 aa12.06□□□□□ -0.48
SIN3A-203ENST00000394949 SPATA3Q8NHX4 192 aa12.06□□□□□ -0.48
SIN3A-203ENST00000394949 H0Y9P7 68 aa12.05□□□□□ -0.48
SIN3A-203ENST00000394949 Q6ZTC4 211 aa12.04□□□□□ -0.48
SIN3A-203ENST00000394949 RETNQ9HD89 108 aa12.04□□□□□ -0.48
SIN3A-203ENST00000394949 A8MTW9 85 aa12.04□□□□□ -0.48
SIN3A-203ENST00000394949 LIMD2Q9BT23 127 aa12.04□□□□□ -0.48
SIN3A-203ENST00000394949 C4orf26Q17RF5 130 aa12.03□□□□□ -0.48
SIN3A-203ENST00000394949 IGLV9-49A0A0B4J1Y8 123 aa12.03□□□□□ -0.48
SIN3A-203ENST00000394949 LOC110117498A0A087WWA1 95 aa12.02□□□□□ -0.48
SIN3A-203ENST00000394949 A0A087WSZ3 146 aa12.02□□□□□ -0.49
SIN3A-203ENST00000394949 SRCAPQ6ZRS2 3230 aa12.02□□□□□ -0.49
SIN3A-203ENST00000394949 ACANP16112 2415 aa12.02□□□□□ -0.49
SIN3A-203ENST00000394949 LITAFQ99732 161 aa12.01□□□□□ -0.49
SIN3A-203ENST00000394949 KLK9Q2XQG4 91 aa12□□□□□ -0.49
SIN3A-203ENST00000394949 CENPFP49454 3210 aa12□□□□□ -0.49
SIN3A-203ENST00000394949 EP400Q96L91 3159 aa12□□□□□ -0.49
SIN3A-203ENST00000394949 Q6ZQT0 140 aa11.99□□□□□ -0.49
SIN3A-203ENST00000394949 Q9BRP9 147 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms