RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ADAMTS20P59510 1910 aa7.41□□□□□ -1.22
COL4A6-203ENST00000394872 Q6JHZ5 121 aa7.41□□□□□ -1.22
COL4A6-203ENST00000394872 EML5Q05BV3 1969 aa7.4□□□□□ -1.22
COL4A6-203ENST00000394872 NHLRC4P0CG21 123 aaPredicted RBP7.4□□□□□ -1.22
COL4A6-203ENST00000394872 Q9BRP9 147 aa7.4□□□□□ -1.22
COL4A6-203ENST00000394872 ZNF580Q9UK33 172 aa7.4□□□□□ -1.23
COL4A6-203ENST00000394872 Q6ZSN1 163 aa7.39□□□□□ -1.23
COL4A6-203ENST00000394872 NAV3Q8IVL0 2385 aa7.39□□□□□ -1.23
COL4A6-203ENST00000394872 A0A087WYN8 130 aa7.39□□□□□ -1.23
COL4A6-203ENST00000394872 F8WDY8 70 aa7.39□□□□□ -1.23
COL4A6-203ENST00000394872 PMAIP1Q13794 54 aa7.38□□□□□ -1.23
COL4A6-203ENST00000394872 BEAN1Q3B7T3 259 aa7.38□□□□□ -1.23
COL4A6-203ENST00000394872 FHL3Q13643 280 aa7.37□□□□□ -1.23
COL4A6-203ENST00000394872 CSDC2Q9Y534 153 aaKnown RBP7.37□□□□□ -1.23
COL4A6-203ENST00000394872 C2orf48Q96LS8 159 aa7.37□□□□□ -1.23
COL4A6-203ENST00000394872 PRYO14603 147 aa7.37□□□□□ -1.23
COL4A6-203ENST00000394872 TSPEAR-AS2P59090 65 aa7.37□□□□□ -1.23
COL4A6-203ENST00000394872 Q6Q795 121 aa7.36□□□□□ -1.23
COL4A6-203ENST00000394872 X6R8D5 127 aa7.36□□□□□ -1.23
COL4A6-203ENST00000394872 LINC00208Q96KT6 92 aa7.36□□□□□ -1.23
COL4A6-203ENST00000394872 ATRXP46100 2492 aa7.36□□□□□ -1.23
COL4A6-203ENST00000394872 AMELXQ99217 191 aa7.36□□□□□ -1.23
COL4A6-203ENST00000394872 A0A1B0GUV1 79 aa7.36□□□□□ -1.23
COL4A6-203ENST00000394872 SOSTDC1Q6X4U4 206 aa7.36□□□□□ -1.23
COL4A6-203ENST00000394872 URB1-AS1Q96HZ7 61 aa7.35□□□□□ -1.23
COL4A6-203ENST00000394872 ADAMTSL4-AS1Q5T5F5 129 aa7.35□□□□□ -1.23
COL4A6-203ENST00000394872 NAV2Q8IVL1 2488 aa7.34□□□□□ -1.23
COL4A6-203ENST00000394872 LINC01547P58512 204 aaPredicted RBP7.34□□□□□ -1.23
COL4A6-203ENST00000394872 Q6ZRU5 148 aa7.34□□□□□ -1.23
COL4A6-203ENST00000394872 TRAV7A0A075B6U4 112 aa7.33□□□□□ -1.24
COL4A6-203ENST00000394872 TRBV7-6A0A0J9YX20 115 aa7.33□□□□□ -1.24
COL4A6-203ENST00000394872 MDFIQ99750 246 aa7.32□□□□□ -1.24
COL4A6-203ENST00000394872 CACNA1AO00555 2505 aa7.32□□□□□ -1.24
COL4A6-203ENST00000394872 LINC00575Q6W349 94 aa7.32□□□□□ -1.24
COL4A6-203ENST00000394872 A0A087WSZ3 146 aa7.32□□□□□ -1.24
COL4A6-203ENST00000394872 PRLHP81277 87 aa7.32□□□□□ -1.24
COL4A6-203ENST00000394872 DEFB116Q30KQ4 102 aa7.32□□□□□ -1.24
COL4A6-203ENST00000394872 COX8CQ7Z4L0 72 aa7.32□□□□□ -1.24
COL4A6-203ENST00000394872 LIMD2Q9BT23 127 aa7.32□□□□□ -1.24
COL4A6-203ENST00000394872 LINC01561Q8N1V8 128 aa7.31□□□□□ -1.24
COL4A6-203ENST00000394872 LINC00310P59036 64 aa7.31□□□□□ -1.24
COL4A6-203ENST00000394872 PCOTHQ58A44 107 aa7.31□□□□□ -1.24
COL4A6-203ENST00000394872 C22orf24Q9Y442 160 aa7.3□□□□□ -1.24
COL4A6-203ENST00000394872 A0A087WVE0 104 aa7.3□□□□□ -1.24
COL4A6-203ENST00000394872 SPINK1P00995 79 aa7.29□□□□□ -1.24
COL4A6-203ENST00000394872 Q8N2B8 174 aa7.29□□□□□ -1.24
COL4A6-203ENST00000394872 SBSPONQ8IVN8 264 aa7.29□□□□□ -1.24
COL4A6-203ENST00000394872 CCDC168Q8NDH2 2452 aa7.29□□□□□ -1.24
COL4A6-203ENST00000394872 A8MTW9 85 aa7.29□□□□□ -1.24
COL4A6-203ENST00000394872 AGRNO00468 2067 aa7.29□□□□□ -1.24
COL4A6-203ENST00000394872 TET2Q6N021 2002 aaPredicted RBP7.28□□□□□ -1.24
COL4A6-203ENST00000394872 H0Y9P7 68 aa7.28□□□□□ -1.24
COL4A6-203ENST00000394872 SMCR5Q8TEV8 140 aa7.28□□□□□ -1.24
COL4A6-203ENST00000394872 LINC00337Q8N6G1 96 aa7.28□□□□□ -1.24
COL4A6-203ENST00000394872 Q8N3U1 123 aa7.27□□□□□ -1.25
COL4A6-203ENST00000394872 PSPHP1O15172 72 aa7.27□□□□□ -1.25
COL4A6-203ENST00000394872 HCG22E2RYF7 251 aa7.26□□□□□ -1.25
COL4A6-203ENST00000394872 ABCA2Q9BZC7 2435 aa7.26□□□□□ -1.25
COL4A6-203ENST00000394872 C11orf72Q8NBR9 251 aa7.25□□□□□ -1.25
COL4A6-203ENST00000394872 IGF2RP11717 2491 aa7.25□□□□□ -1.25
COL4A6-203ENST00000394872 NCOR2Q9Y618 2525 aa7.25□□□□□ -1.25
COL4A6-203ENST00000394872 TRBV7-7A0A0K0K1E9 115 aa7.25□□□□□ -1.25
COL4A6-203ENST00000394872 A0A096LNJ9 63 aa7.25□□□□□ -1.25
COL4A6-203ENST00000394872 PIEZO2Q9H5I5 2752 aa7.23□□□□□ -1.25
COL4A6-203ENST00000394872 KRTAP24-1Q3LI83 254 aa7.22□□□□□ -1.25
COL4A6-203ENST00000394872 SPACA4Q8TDM5 124 aa7.22□□□□□ -1.25
COL4A6-203ENST00000394872 PRO0628Q9UI54 55 aa7.22□□□□□ -1.25
COL4A6-203ENST00000394872 KIAA0087Q14695 138 aa7.21□□□□□ -1.25
COL4A6-203ENST00000394872 IGKV2D-30A0A075B6S6 120 aa7.21□□□□□ -1.26
COL4A6-203ENST00000394872 IGKV2-30P06310 120 aa7.21□□□□□ -1.26
COL4A6-203ENST00000394872 MOBPQ13875 183 aa7.21□□□□□ -1.26
COL4A6-203ENST00000394872 KIF25-AS1Q9Y6Z4 181 aa7.21□□□□□ -1.26
COL4A6-203ENST00000394872 FAM229AH3BQW9 127 aa7.21□□□□□ -1.26
COL4A6-203ENST00000394872 LINC00167Q96N53 147 aa7.2□□□□□ -1.26
COL4A6-203ENST00000394872 MYO18BQ8IUG5 2567 aa7.19□□□□□ -1.26
COL4A6-203ENST00000394872 COL4A2P08572 1712 aa7.19□□□□□ -1.26
COL4A6-203ENST00000394872 LINC00846Q9NV44 126 aa7.19□□□□□ -1.26
COL4A6-203ENST00000394872 CRYGAP11844 174 aa7.19□□□□□ -1.26
COL4A6-203ENST00000394872 C7orf65Q6ZTY9 151 aa7.18□□□□□ -1.26
COL4A6-203ENST00000394872 C6orf48Q9UBA6 75 aa7.18□□□□□ -1.26
COL4A6-203ENST00000394872 LINC00315P59091 139 aa7.18□□□□□ -1.26
COL4A6-203ENST00000394872 RTL8CO15255 209 aa7.18□□□□□ -1.26
COL4A6-203ENST00000394872 C1orf64Q8NEQ6 169 aa7.17□□□□□ -1.26
COL4A6-203ENST00000394872 IGLV5-39A0A0G2JS06 123 aa7.17□□□□□ -1.26
COL4A6-203ENST00000394872 H3BNG1 76 aa7.17□□□□□ -1.26
COL4A6-203ENST00000394872 SERTAD4-AS1Q5TG53 156 aa7.17□□□□□ -1.26
COL4A6-203ENST00000394872 FAM19A4Q96LR4 140 aa7.17□□□□□ -1.26
COL4A6-203ENST00000394872 hDV103S1A0JD37 113 aa7.17□□□□□ -1.26
COL4A6-203ENST00000394872 PHF5AQ7RTV0 110 aaKnown RBP7.17□□□□□ -1.26
COL4A6-203ENST00000394872 IGHV3OR16-9A0A0B4J2B5 98 aa7.17□□□□□ -1.26
COL4A6-203ENST00000394872 C16orf90A8MZG2 172 aa7.17□□□□□ -1.26
COL4A6-203ENST00000394872 CXCL6P80162 114 aa7.17□□□□□ -1.26
COL4A6-203ENST00000394872 TMEM254Q8TBM7 123 aa7.17□□□□□ -1.26
COL4A6-203ENST00000394872 PIEZO1Q92508 2521 aa7.16□□□□□ -1.26
COL4A6-203ENST00000394872 NBDYA0A0U1RRE5 68 aa7.15□□□□□ -1.26
COL4A6-203ENST00000394872 COL27A1Q8IZC6 1860 aaPredicted RBP7.15□□□□□ -1.26
COL4A6-203ENST00000394872 CHTF8P0CG12 524 aa7.15□□□□□ -1.26
COL4A6-203ENST00000394872 SMIM29Q86T20 159 aa7.15□□□□□ -1.27
COL4A6-203ENST00000394872 C2CD3Q4AC94 2353 aa7.15□□□□□ -1.27
COL4A6-203ENST00000394872 LINC01546A6NGU7 62 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms