RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 C9orf118A6NHY6 69 aa5.41□□□□□ -1.54
APLF-202ENST00000394342 LINC00614P0C842 121 aa5.41□□□□□ -1.54
APLF-202ENST00000394342 PTTG1IPP53801 180 aa5.41□□□□□ -1.54
APLF-202ENST00000394342 KRTAP10-4P60372 401 aaPredicted RBP5.41□□□□□ -1.54
APLF-202ENST00000394342 RAB5BP61020 215 aa5.41□□□□□ -1.54
APLF-202ENST00000394342 RPL37AP61513 92 aaKnown RBP5.41□□□□□ -1.54
APLF-202ENST00000394342 KIAA0087Q14695 138 aa5.41□□□□□ -1.54
APLF-202ENST00000394342 SLC7A5P1Q8MH63 180 aa5.41□□□□□ -1.54
APLF-202ENST00000394342 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.4□□□□□ -1.54
APLF-202ENST00000394342 PMVKQ15126 192 aa5.4□□□□□ -1.54
APLF-202ENST00000394342 CBLN2Q8IUK8 224 aa5.4□□□□□ -1.54
APLF-202ENST00000394342 STPG4Q8N801 248 aa5.4□□□□□ -1.54
APLF-202ENST00000394342 URB1-AS1Q96HZ7 61 aa5.4□□□□□ -1.54
APLF-202ENST00000394342 GEMIN7Q9H840 131 aaKnown RBP5.4□□□□□ -1.54
APLF-202ENST00000394342 TNXBP22105 4242 aa5.4□□□□□ -1.55
APLF-202ENST00000394342 A0A096LNJ9 63 aa5.39□□□□□ -1.55
APLF-202ENST00000394342 A0A0J9YXV3 536 aa5.39□□□□□ -1.55
APLF-202ENST00000394342 TRBV30A0A0K0K1B3 111 aa5.39□□□□□ -1.55
APLF-202ENST00000394342 TINCRA0A1B0GVN0 87 aa5.39□□□□□ -1.55
APLF-202ENST00000394342 HBDP02042 147 aa5.39□□□□□ -1.55
APLF-202ENST00000394342 TLX1NBP0CAT3 122 aa5.39□□□□□ -1.55
APLF-202ENST00000394342 GAGE2BQ13066 116 aa5.39□□□□□ -1.55
APLF-202ENST00000394342 Q8IZM0 81 aa5.39□□□□□ -1.55
APLF-202ENST00000394342 C7orf33Q8WU49 177 aa5.39□□□□□ -1.55
APLF-202ENST00000394342 PACRGQ96M98 296 aaPredicted RBP5.39□□□□□ -1.55
APLF-202ENST00000394342 CST9LQ9H4G1 147 aa5.39□□□□□ -1.55
APLF-202ENST00000394342 CDKN2A-AS1Q9UH64 79 aa5.39□□□□□ -1.55
APLF-202ENST00000394342 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
APLF-202ENST00000394342 PRSS2P07478 247 aa5.38□□□□□ -1.55
APLF-202ENST00000394342 RPL18AQ02543 176 aaKnown RBP5.38□□□□□ -1.55
APLF-202ENST00000394342 PDZD11Q5EBL8 140 aa5.38□□□□□ -1.55
APLF-202ENST00000394342 C10orf25Q5T742 122 aa5.38□□□□□ -1.55
APLF-202ENST00000394342 UNQ6190/PRO20217Q6UXQ8 127 aa5.38□□□□□ -1.55
APLF-202ENST00000394342 LINC00469Q8N7U9 141 aa5.38□□□□□ -1.55
APLF-202ENST00000394342 C6orf48Q9UBA6 75 aa5.38□□□□□ -1.55
APLF-202ENST00000394342 B5MCH6 92 aa5.37□□□□□ -1.55
APLF-202ENST00000394342 ATP5LO75964 103 aa5.37□□□□□ -1.55
APLF-202ENST00000394342 CHCHD1Q96BP2 118 aaKnown RBP5.37□□□□□ -1.55
APLF-202ENST00000394342 TOMM7Q9P0U1 55 aa5.37□□□□□ -1.55
APLF-202ENST00000394342 IGLC3P0DOY3 106 aa5.36□□□□□ -1.55
APLF-202ENST00000394342 CXCL5P42830 114 aa5.36□□□□□ -1.55
APLF-202ENST00000394342 CKS1BP61024 79 aa5.36□□□□□ -1.55
APLF-202ENST00000394342 PMCHL1Q16048 86 aa5.36□□□□□ -1.55
APLF-202ENST00000394342 C6orf226Q5I0X4 101 aa5.36□□□□□ -1.55
APLF-202ENST00000394342 C2orf82Q6UX34 121 aa5.36□□□□□ -1.55
APLF-202ENST00000394342 A0A1W2PNN7 141 aa5.35□□□□□ -1.55
APLF-202ENST00000394342 SMIM1B2RUZ4 78 aa5.35□□□□□ -1.55
APLF-202ENST00000394342 NDUFC2-KCTD14E9PQ53 114 aa5.35□□□□□ -1.55
APLF-202ENST00000394342 H3BRM9 83 aa5.35□□□□□ -1.55
APLF-202ENST00000394342 NDUFA6P56556 154 aa5.35□□□□□ -1.55
APLF-202ENST00000394342 C9orf116Q5BN46 136 aaPredicted RBP5.35□□□□□ -1.55
APLF-202ENST00000394342 Q6ZRP5 223 aa5.35□□□□□ -1.55
APLF-202ENST00000394342 COLCA2A8K830 154 aa5.34□□□□□ -1.55
APLF-202ENST00000394342 KRTAP29-1A8MX34 341 aaPredicted RBP5.34□□□□□ -1.55
APLF-202ENST00000394342 F8VRH5 84 aa5.34□□□□□ -1.55
APLF-202ENST00000394342 TRGC2P03986 189 aa5.34□□□□□ -1.55
APLF-202ENST00000394342 HNRNPA3P51991 378 aaKnown RBP5.34□□□□□ -1.55
APLF-202ENST00000394342 LINC00310P59036 64 aa5.34□□□□□ -1.55
APLF-202ENST00000394342 PRR3P79522 188 aaKnown RBP5.34□□□□□ -1.55
APLF-202ENST00000394342 BAGE3Q86Y29 109 aa5.34□□□□□ -1.55
APLF-202ENST00000394342 COX7B2Q8TF08 81 aa5.34□□□□□ -1.55
APLF-202ENST00000394342 KRTAP9-9Q9BYP9 154 aa5.34□□□□□ -1.55
APLF-202ENST00000394342 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
APLF-202ENST00000394342 OXTP01178 125 aa5.33□□□□□ -1.56
APLF-202ENST00000394342 SPINK8P0C7L1 97 aa5.33□□□□□ -1.56
APLF-202ENST00000394342 GAGE2EQ4V326 116 aa5.33□□□□□ -1.56
APLF-202ENST00000394342 GAGE2DQ9UEU5 116 aa5.33□□□□□ -1.56
APLF-202ENST00000394342 TRAV12-1A0A0B4J245 112 aa5.32□□□□□ -1.56
APLF-202ENST00000394342 IGLV5-39A0A0G2JS06 123 aa5.32□□□□□ -1.56
APLF-202ENST00000394342 HSBP1O75506 76 aa5.32□□□□□ -1.56
APLF-202ENST00000394342 ZNF22P17026 224 aaPredicted RBP5.32□□□□□ -1.56
APLF-202ENST00000394342 IFI27L1Q96BM0 104 aa5.32□□□□□ -1.56
APLF-202ENST00000394342 CHTOPQ9Y3Y2 248 aaKnown RBP5.32□□□□□ -1.56
APLF-202ENST00000394342 FAM168BA1KXE4 195 aa5.31□□□□□ -1.56
APLF-202ENST00000394342 C11orf86A6NJI1 115 aa5.31□□□□□ -1.56
APLF-202ENST00000394342 C9orf129Q5T035 196 aaKnown RBP5.31□□□□□ -1.56
APLF-202ENST00000394342 PHF5AQ7RTV0 110 aaKnown RBP5.31□□□□□ -1.56
APLF-202ENST00000394342 SERF1AO75920 110 aa5.3□□□□□ -1.56
APLF-202ENST00000394342 TMEM170BQ5T4T1 132 aa5.3□□□□□ -1.56
APLF-202ENST00000394342 FAM19A5Q7Z5A7 132 aaPredicted RBP5.3□□□□□ -1.56
APLF-202ENST00000394342 FAM19A2Q8N3H0 131 aa5.3□□□□□ -1.56
APLF-202ENST00000394342 M0QXV9 152 aa5.29□□□□□ -1.56
APLF-202ENST00000394342 LEPROTL1O95214 131 aa5.29□□□□□ -1.56
APLF-202ENST00000394342 SFTA2Q6UW10 78 aa5.29□□□□□ -1.56
APLF-202ENST00000394342 PSORS1C2Q9UIG4 136 aa5.29□□□□□ -1.56
APLF-202ENST00000394342 SCO1O75880 301 aa5.28□□□□□ -1.56
APLF-202ENST00000394342 SPINK6Q6UWN8 80 aa5.28□□□□□ -1.56
APLF-202ENST00000394342 KRTAP7-1Q8IUC3 87 aa5.28□□□□□ -1.56
APLF-202ENST00000394342 HSPB8Q9UJY1 196 aa5.28□□□□□ -1.56
APLF-202ENST00000394342 TMEM223A0PJW6 202 aa5.27□□□□□ -1.57
APLF-202ENST00000394342 SRSF9Q13242 221 aaKnown RBP eCLIP5.27□□□□□ -1.57
APLF-202ENST00000394342 C1orf137Q5JT78 98 aa5.27□□□□□ -1.57
APLF-202ENST00000394342 XAGE1AQ9HD64 81 aa5.27□□□□□ -1.57
APLF-202ENST00000394342 TP73-AS1Q9UF72 201 aa5.27□□□□□ -1.57
APLF-202ENST00000394342 NUPR1O60356 82 aa5.26□□□□□ -1.57
APLF-202ENST00000394342 UBE2BP63146 152 aa5.26□□□□□ -1.57
APLF-202ENST00000394342 COX17Q14061 63 aa5.26□□□□□ -1.57
APLF-202ENST00000394342 LBHQ53QV2 105 aaPredicted RBP5.26□□□□□ -1.57
APLF-202ENST00000394342 SERTAD4-AS1Q5TG53 156 aa5.26□□□□□ -1.57
APLF-202ENST00000394342 KRTAP4-8A0A0G2JLE6 195 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms