RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 NOP10Q9NPE3 64 aaKnown RBP7.09□□□□□ -1.28
PSEN1-204ENST00000394164 WIPF1O43516 503 aa7.08□□□□□ -1.28
PSEN1-204ENST00000394164 LINC01006Q8NI28 216 aa7.08□□□□□ -1.28
PSEN1-204ENST00000394164 IGKV3OR2-268A0A0C4DH90 116 aa7.08□□□□□ -1.28
PSEN1-204ENST00000394164 ANK3Q12955 4377 aaKnown RBP7.08□□□□□ -1.28
PSEN1-204ENST00000394164 FLNBO75369 2602 aaKnown RBP7.07□□□□□ -1.28
PSEN1-204ENST00000394164 TIMM17BO60830 172 aa7.07□□□□□ -1.28
PSEN1-204ENST00000394164 TOMM7Q9P0U1 55 aa7.07□□□□□ -1.28
PSEN1-204ENST00000394164 LECT2O14960 151 aa7.06□□□□□ -1.28
PSEN1-204ENST00000394164 C20orf197Q8N268 126 aa7.06□□□□□ -1.28
PSEN1-204ENST00000394164 GHRHP01286 108 aa7.06□□□□□ -1.28
PSEN1-204ENST00000394164 CRPP02741 224 aa7.06□□□□□ -1.28
PSEN1-204ENST00000394164 RNASE1P07998 156 aaKnown RBP7.06□□□□□ -1.28
PSEN1-204ENST00000394164 LINC00337Q8N6G1 96 aa7.06□□□□□ -1.28
PSEN1-204ENST00000394164 LOC100131303A0A0U1RQF7 123 aa7.06□□□□□ -1.28
PSEN1-204ENST00000394164 LINC00242Q5T6M2 205 aa7.05□□□□□ -1.28
PSEN1-204ENST00000394164 FAM19A1Q7Z5A9 133 aa7.05□□□□□ -1.28
PSEN1-204ENST00000394164 PKIGQ9Y2B9 76 aa7.05□□□□□ -1.28
PSEN1-204ENST00000394164 TRRAPQ9Y4A5 3859 aa7.05□□□□□ -1.28
PSEN1-204ENST00000394164 TRGV2A0A075B6R0 118 aa7.05□□□□□ -1.28
PSEN1-204ENST00000394164 RPL28P46779 137 aaKnown RBP7.05□□□□□ -1.28
PSEN1-204ENST00000394164 C1orf43Q9BWL3 253 aa7.05□□□□□ -1.28
PSEN1-204ENST00000394164 SMIM1B2RUZ4 78 aa7.04□□□□□ -1.28
PSEN1-204ENST00000394164 SMIM11BQ8TCY0 68 aa7.04□□□□□ -1.28
PSEN1-204ENST00000394164 TMEM243Q9BU79 118 aa7.04□□□□□ -1.28
PSEN1-204ENST00000394164 KRTAP1-1Q07627 177 aa7.04□□□□□ -1.28
PSEN1-204ENST00000394164 Q6JHZ5 121 aa7.04□□□□□ -1.28
PSEN1-204ENST00000394164 MIR7-3HGQ8N6C7 128 aa7.04□□□□□ -1.28
PSEN1-204ENST00000394164 PFN2P35080 140 aa7.03□□□□□ -1.28
PSEN1-204ENST00000394164 FAM222AQ5U5X8 452 aa7.03□□□□□ -1.28
PSEN1-204ENST00000394164 RPL36AP83881 106 aaKnown RBP7.03□□□□□ -1.28
PSEN1-204ENST00000394164 ENHOQ6UWT2 76 aa7.03□□□□□ -1.28
PSEN1-204ENST00000394164 LINC00336Q6ZUF6 198 aa7.03□□□□□ -1.28
PSEN1-204ENST00000394164 RPL36ALQ969Q0 106 aaKnown RBP7.03□□□□□ -1.28
PSEN1-204ENST00000394164 C11orf68Q9H3H3 251 aaKnown RBP7.03□□□□□ -1.28
PSEN1-204ENST00000394164 SND1-IT1Q9HBX3 110 aa7.03□□□□□ -1.28
PSEN1-204ENST00000394164 DEFB130BP0DP73 79 aa7.02□□□□□ -1.29
PSEN1-204ENST00000394164 DEFB130AP0DP74 79 aa7.02□□□□□ -1.29
PSEN1-204ENST00000394164 LINC00158P58513 81 aa7.02□□□□□ -1.29
PSEN1-204ENST00000394164 IGKV2-28A0A075B6P5 120 aa7.02□□□□□ -1.29
PSEN1-204ENST00000394164 IGKV2D-28P01615 120 aa7.02□□□□□ -1.29
PSEN1-204ENST00000394164 TEP1Q99973 2627 aaKnown RBP7.02□□□□□ -1.29
PSEN1-204ENST00000394164 NSD1Q96L73 2696 aaPredicted RBP7.02□□□□□ -1.29
PSEN1-204ENST00000394164 A8MTW9 85 aa7.01□□□□□ -1.29
PSEN1-204ENST00000394164 GIG44P09565 113 aaPredicted RBP7.01□□□□□ -1.29
PSEN1-204ENST00000394164 TMEM86BQ8N661 226 aa7.01□□□□□ -1.29
PSEN1-204ENST00000394164 HIVEP1P15822 2718 aa7.01□□□□□ -1.29
PSEN1-204ENST00000394164 IGLV5-39A0A0G2JS06 123 aa7.01□□□□□ -1.29
PSEN1-204ENST00000394164 J3QKU1 62 aa7.01□□□□□ -1.29
PSEN1-204ENST00000394164 NTM-AS1Q6ZSK4 140 aa7.01□□□□□ -1.29
PSEN1-204ENST00000394164 SPATA3Q8NHX4 192 aa7.01□□□□□ -1.29
PSEN1-204ENST00000394164 A0A096LPF7 62 aa7□□□□□ -1.29
PSEN1-204ENST00000394164 TRAV13-2A0A0B4J235 113 aa7□□□□□ -1.29
PSEN1-204ENST00000394164 DEFB4AO15263 64 aa7□□□□□ -1.29
PSEN1-204ENST00000394164 COPS9Q8WXC6 57 aa7□□□□□ -1.29
PSEN1-204ENST00000394164 SNURFQ9Y675 71 aa7□□□□□ -1.29
PSEN1-204ENST00000394164 PAX4O43316 350 aa7□□□□□ -1.29
PSEN1-204ENST00000394164 TRGV4A0A0C4DH28 118 aa6.99□□□□□ -1.29
PSEN1-204ENST00000394164 FAM236DA0A1B0GTK5 79 aa6.99□□□□□ -1.29
PSEN1-204ENST00000394164 FAM236CP0DP71 79 aa6.99□□□□□ -1.29
PSEN1-204ENST00000394164 IGLV5-45A0A087WSX0 123 aa6.99□□□□□ -1.29
PSEN1-204ENST00000394164 K7EQD1 137 aa6.99□□□□□ -1.29
PSEN1-204ENST00000394164 PF4P02776 101 aa6.99□□□□□ -1.29
PSEN1-204ENST00000394164 KMT2BQ9UMN6 2715 aaPredicted RBP6.99□□□□□ -1.29
PSEN1-204ENST00000394164 A0A0U1RQV1 116 aa6.98□□□□□ -1.29
PSEN1-204ENST00000394164 KRTAP10-3P60369 221 aa6.98□□□□□ -1.29
PSEN1-204ENST00000394164 LINC00482Q8N8I6 264 aa6.98□□□□□ -1.29
PSEN1-204ENST00000394164 UBE2L6O14933 153 aa6.98□□□□□ -1.29
PSEN1-204ENST00000394164 XCL1P47992 114 aa6.97□□□□□ -1.29
PSEN1-204ENST00000394164 IGLV1-51P01701 117 aa6.96□□□□□ -1.29
PSEN1-204ENST00000394164 CCL18P55774 89 aa6.96□□□□□ -1.29
PSEN1-204ENST00000394164 PRR3P79522 188 aaKnown RBP6.96□□□□□ -1.3
PSEN1-204ENST00000394164 ORMDL1Q9P0S3 153 aa6.96□□□□□ -1.3
PSEN1-204ENST00000394164 PLAC8L1A1L4L8 177 aa6.95□□□□□ -1.3
PSEN1-204ENST00000394164 CLPSL2Q6UWE3 100 aa6.95□□□□□ -1.3
PSEN1-204ENST00000394164 MRAPQ8TCY5 172 aa6.95□□□□□ -1.3
PSEN1-204ENST00000394164 INAFM1C9JVW0 142 aa6.95□□□□□ -1.3
PSEN1-204ENST00000394164 LY6G6DO95868 133 aa6.95□□□□□ -1.3
PSEN1-204ENST00000394164 RMI2Q96E14 147 aa6.95□□□□□ -1.3
PSEN1-204ENST00000394164 C19orf73Q9NVV2 129 aa6.95□□□□□ -1.3
PSEN1-204ENST00000394164 CCKP06307 115 aa6.95□□□□□ -1.3
PSEN1-204ENST00000394164 SS18Q15532 418 aa6.95□□□□□ -1.3
PSEN1-204ENST00000394164 LINC00474Q9P2X8 69 aa6.95□□□□□ -1.3
PSEN1-204ENST00000394164 NDUFC2O95298 119 aa6.94□□□□□ -1.3
PSEN1-204ENST00000394164 COX7B2Q8TF08 81 aa6.94□□□□□ -1.3
PSEN1-204ENST00000394164 PRO0628Q9UI54 55 aa6.94□□□□□ -1.3
PSEN1-204ENST00000394164 F8P00451 2351 aa6.94□□□□□ -1.3
PSEN1-204ENST00000394164 IL17DQ8TAD2 202 aa6.93□□□□□ -1.3
PSEN1-204ENST00000394164 IGLV4-60A0A075B6I1 120 aa6.93□□□□□ -1.3
PSEN1-204ENST00000394164 H0YGX0 51 aa6.93□□□□□ -1.3
PSEN1-204ENST00000394164 BRK1Q8WUW1 75 aa6.93□□□□□ -1.3
PSEN1-204ENST00000394164 C16orf74Q96GX8 76 aa6.93□□□□□ -1.3
PSEN1-204ENST00000394164 OBSCN-AS1Q96MR7 158 aa6.93□□□□□ -1.3
PSEN1-204ENST00000394164 OVOL2Q9BRP0 275 aa6.93□□□□□ -1.3
PSEN1-204ENST00000394164 CDC42SE2Q9NRR3 84 aa6.93□□□□□ -1.3
PSEN1-204ENST00000394164 STAB1Q9NY15 2570 aa6.93□□□□□ -1.3
PSEN1-204ENST00000394164 HAMPP81172 84 aa6.92□□□□□ -1.3
PSEN1-204ENST00000394164 CSNK1G2-AS1Q8NCQ2 148 aa6.92□□□□□ -1.3
PSEN1-204ENST00000394164 TRAV10A0A0B4J240 114 aa6.92□□□□□ -1.3
PSEN1-204ENST00000394164 F8WEM9 126 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms