RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 C6orf226Q5I0X4 101 aa19.11■□□□□ 0.65
CMTM4-202ENST00000394106 CST9LQ9H4G1 147 aa19.11■□□□□ 0.65
CMTM4-202ENST00000394106 Q8IZM0 81 aa19.1■□□□□ 0.65
CMTM4-202ENST00000394106 TINCRA0A1B0GVN0 87 aa19.08■□□□□ 0.64
CMTM4-202ENST00000394106 FAM168BA1KXE4 195 aa19.08■□□□□ 0.64
CMTM4-202ENST00000394106 PMVKQ15126 192 aa19.08■□□□□ 0.64
CMTM4-202ENST00000394106 PHF5AQ7RTV0 110 aaKnown RBP19.08■□□□□ 0.64
CMTM4-202ENST00000394106 URB1-AS1Q96HZ7 61 aa19.08■□□□□ 0.64
CMTM4-202ENST00000394106 LINC00614P0C842 121 aa19.07■□□□□ 0.64
CMTM4-202ENST00000394106 NDUFC2-KCTD14E9PQ53 114 aa19.06■□□□□ 0.64
CMTM4-202ENST00000394106 FAM19A5Q7Z5A7 132 aaPredicted RBP19.05■□□□□ 0.64
CMTM4-202ENST00000394106 A0A096LNJ9 63 aa19.04■□□□□ 0.64
CMTM4-202ENST00000394106 PMCHL1Q16048 86 aa19.04■□□□□ 0.64
CMTM4-202ENST00000394106 SMIM1B2RUZ4 78 aa19.03■□□□□ 0.64
CMTM4-202ENST00000394106 YPEL4Q96NS1 127 aa19.03■□□□□ 0.64
CMTM4-202ENST00000394106 NDUFA6P56556 154 aa19.02■□□□□ 0.64
CMTM4-202ENST00000394106 IGLV5-45A0A087WSX0 123 aa19.01■□□□□ 0.63
CMTM4-202ENST00000394106 HBDP02042 147 aa19.01■□□□□ 0.63
CMTM4-202ENST00000394106 RAB5BP61020 215 aa19■□□□□ 0.63
CMTM4-202ENST00000394106 PSORS1C2Q9UIG4 136 aa19■□□□□ 0.63
CMTM4-202ENST00000394106 F8VRH5 84 aa18.99■□□□□ 0.63
CMTM4-202ENST00000394106 SPINK8P0C7L1 97 aa18.99■□□□□ 0.63
CMTM4-202ENST00000394106 PDZD11Q5EBL8 140 aa18.99■□□□□ 0.63
CMTM4-202ENST00000394106 C9orf129Q5T035 196 aaKnown RBP18.98■□□□□ 0.63
CMTM4-202ENST00000394106 SPINK6Q6UWN8 80 aa18.98■□□□□ 0.63
CMTM4-202ENST00000394106 CBLN2Q8IUK8 224 aa18.98■□□□□ 0.63
CMTM4-202ENST00000394106 COX7B2Q8TF08 81 aa18.98■□□□□ 0.63
CMTM4-202ENST00000394106 CXCL5P42830 114 aa18.97■□□□□ 0.63
CMTM4-202ENST00000394106 MT1HL1P0DM35 61 aa18.96■□□□□ 0.63
CMTM4-202ENST00000394106 KRTAP7-1Q8IUC3 87 aa18.95■□□□□ 0.62
CMTM4-202ENST00000394106 H3BRM9 83 aa18.94■□□□□ 0.62
CMTM4-202ENST00000394106 SRSF9Q13242 221 aaKnown RBP eCLIP18.94■□□□□ 0.62
CMTM4-202ENST00000394106 C1orf137Q5JT78 98 aa18.94■□□□□ 0.62
CMTM4-202ENST00000394106 M0QXV9 152 aa18.93■□□□□ 0.62
CMTM4-202ENST00000394106 IGLC3P0DOY3 106 aa18.93■□□□□ 0.62
CMTM4-202ENST00000394106 SLC7A5P1Q8MH63 180 aa18.93■□□□□ 0.62
CMTM4-202ENST00000394106 ATP5LO75964 103 aa18.91■□□□□ 0.62
CMTM4-202ENST00000394106 XAGE1AQ9HD64 81 aa18.91■□□□□ 0.62
CMTM4-202ENST00000394106 SERTAD4-AS1Q5TG53 156 aa18.9■□□□□ 0.62
CMTM4-202ENST00000394106 KRTAP11-1Q8IUC1 163 aa18.9■□□□□ 0.62
CMTM4-202ENST00000394106 REG3GQ6UW15 175 aa18.89■□□□□ 0.61
CMTM4-202ENST00000394106 UBE2BP63146 152 aa18.88■□□□□ 0.61
CMTM4-202ENST00000394106 BAGE3Q86Y29 109 aa18.87■□□□□ 0.61
CMTM4-202ENST00000394106 LINC01600Q96MT4 127 aa18.87■□□□□ 0.61
CMTM4-202ENST00000394106 ZNF22P17026 224 aaPredicted RBP18.86■□□□□ 0.61
CMTM4-202ENST00000394106 CHCHD1Q96BP2 118 aaKnown RBP18.86■□□□□ 0.61
CMTM4-202ENST00000394106 IGLV7-43P04211 117 aa18.82■□□□□ 0.6
CMTM4-202ENST00000394106 C11orf86A6NJI1 115 aa18.81■□□□□ 0.6
CMTM4-202ENST00000394106 IGLV5-39A0A0G2JS06 123 aa18.8■□□□□ 0.6
CMTM4-202ENST00000394106 TRGC2P03986 189 aa18.8■□□□□ 0.6
CMTM4-202ENST00000394106 TMEM170BQ5T4T1 132 aa18.79■□□□□ 0.6
CMTM4-202ENST00000394106 CHTOPQ9Y3Y2 248 aaKnown RBP18.79■□□□□ 0.6
CMTM4-202ENST00000394106 C22orf24Q9Y442 160 aa18.79■□□□□ 0.6
CMTM4-202ENST00000394106 IFI27L1Q96BM0 104 aa18.77■□□□□ 0.6
CMTM4-202ENST00000394106 HSBP1O75506 76 aa18.76■□□□□ 0.59
CMTM4-202ENST00000394106 FAM19A2Q8N3H0 131 aa18.75■□□□□ 0.59
CMTM4-202ENST00000394106 LBHQ53QV2 105 aaPredicted RBP18.74■□□□□ 0.59
CMTM4-202ENST00000394106 PLA2G2DQ9UNK4 145 aa18.74■□□□□ 0.59
CMTM4-202ENST00000394106 DIRC1Q969H9 104 aa18.73■□□□□ 0.59
CMTM4-202ENST00000394106 PFN2P35080 140 aa18.72■□□□□ 0.59
CMTM4-202ENST00000394106 TRAV12-1A0A0B4J245 112 aa18.71■□□□□ 0.59
CMTM4-202ENST00000394106 MRPL55Q7Z7F7 128 aaKnown RBP18.7■□□□□ 0.58
CMTM4-202ENST00000394106 TP73-AS1Q9UF72 201 aa18.69■□□□□ 0.58
CMTM4-202ENST00000394106 KRTAP10-8P60410 259 aa18.68■□□□□ 0.58
CMTM4-202ENST00000394106 ZNF625Q96I27 306 aaPredicted RBP18.68■□□□□ 0.58
CMTM4-202ENST00000394106 HMCN2Q8NDA2 5059 aa18.68■□□□□ 0.58
CMTM4-202ENST00000394106 SERF1AO75920 110 aa18.67■□□□□ 0.58
CMTM4-202ENST00000394106 ERG28Q9UKR5 140 aa18.67■□□□□ 0.58
CMTM4-202ENST00000394106 TNXBP22105 4242 aa18.67■□□□□ 0.58
CMTM4-202ENST00000394106 COLCA2A8K830 154 aa18.66■□□□□ 0.58
CMTM4-202ENST00000394106 H0Y9J4 135 aa18.66■□□□□ 0.58
CMTM4-202ENST00000394106 ODF1Q14990 250 aa18.66■□□□□ 0.58
CMTM4-202ENST00000394106 H0Y8G0 127 aa18.64■□□□□ 0.57
CMTM4-202ENST00000394106 LINC00310P59036 64 aa18.64■□□□□ 0.57
CMTM4-202ENST00000394106 TMEM223A0PJW6 202 aa18.63■□□□□ 0.57
CMTM4-202ENST00000394106 GAGE10A6NGK3 116 aa18.63■□□□□ 0.57
CMTM4-202ENST00000394106 NUPR1O60356 82 aa18.63■□□□□ 0.57
CMTM4-202ENST00000394106 LINC00167Q96N53 147 aa18.63■□□□□ 0.57
CMTM4-202ENST00000394106 RPL37AP8A6NKH3 93 aa18.62■□□□□ 0.57
CMTM4-202ENST00000394106 NKAPP1Q8N9T2 125 aa18.62■□□□□ 0.57
CMTM4-202ENST00000394106 SFTA2Q6UW10 78 aa18.61■□□□□ 0.57
CMTM4-202ENST00000394106 LEPROTL1O95214 131 aa18.6■□□□□ 0.57
CMTM4-202ENST00000394106 COX17Q14061 63 aa18.6■□□□□ 0.57
CMTM4-202ENST00000394106 SND1-IT1Q9HBX3 110 aa18.6■□□□□ 0.57
CMTM4-202ENST00000394106 IGLV5-37A0A075B6J1 123 aa18.59■□□□□ 0.57
CMTM4-202ENST00000394106 ZNF861PO60384 105 aa18.56■□□□□ 0.56
CMTM4-202ENST00000394106 SCO1O75880 301 aa18.55■□□□□ 0.56
CMTM4-202ENST00000394106 FABP4P15090 132 aa18.54■□□□□ 0.56
CMTM4-202ENST00000394106 PRR26Q8N8Z3 221 aa18.54■□□□□ 0.56
CMTM4-202ENST00000394106 BCE1O60756 84 aa18.53■□□□□ 0.56
CMTM4-202ENST00000394106 LINC00158P58513 81 aa18.53■□□□□ 0.56
CMTM4-202ENST00000394106 HSPB8Q9UJY1 196 aa18.52■□□□□ 0.56
CMTM4-202ENST00000394106 UBR4Q5T4S7 5183 aa18.5■□□□□ 0.55
CMTM4-202ENST00000394106 A0A0U1RRA0 63 aa18.5■□□□□ 0.55
CMTM4-202ENST00000394106 KRTAP1-4P0C5Y4 121 aa18.5■□□□□ 0.55
CMTM4-202ENST00000394106 VPREB1P12018 145 aa18.5■□□□□ 0.55
CMTM4-202ENST00000394106 IGKV2-28A0A075B6P5 120 aa18.49■□□□□ 0.55
CMTM4-202ENST00000394106 IGKV2D-28P01615 120 aa18.49■□□□□ 0.55
CMTM4-202ENST00000394106 RPL24P83731 157 aaKnown RBP18.49■□□□□ 0.55
CMTM4-202ENST00000394106 RPL28P46779 137 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms