RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 SPART-AS1P0CW21 52 aa5□□□□□ -1.61
SMAD1-202ENST00000394092 C2orf82Q6UX34 121 aa5□□□□□ -1.61
SMAD1-202ENST00000394092 SOSTDC1Q6X4U4 206 aa5□□□□□ -1.61
SMAD1-202ENST00000394092 Q8IZM0 81 aa5□□□□□ -1.61
SMAD1-202ENST00000394092 Q8NAQ8 132 aa5□□□□□ -1.61
SMAD1-202ENST00000394092 UBE2WQ96B02 151 aa5□□□□□ -1.61
SMAD1-202ENST00000394092 CXCL5P42830 114 aa4.99□□□□□ -1.61
SMAD1-202ENST00000394092 LINC00158P58513 81 aa4.99□□□□□ -1.61
SMAD1-202ENST00000394092 MRPL23Q16540 153 aaKnown RBP4.99□□□□□ -1.61
SMAD1-202ENST00000394092 C6orf226Q5I0X4 101 aa4.99□□□□□ -1.61
SMAD1-202ENST00000394092 SHISA2Q6UWI4 295 aa4.99□□□□□ -1.61
SMAD1-202ENST00000394092 MIR7-3HGQ8N6C7 128 aa4.99□□□□□ -1.61
SMAD1-202ENST00000394092 CARD19Q96LW7 228 aa4.99□□□□□ -1.61
SMAD1-202ENST00000394092 NIPBLQ6KC79 2804 aaeCLIP4.99□□□□□ -1.61
SMAD1-202ENST00000394092 OTOGQ6ZRI0 2925 aa4.99□□□□□ -1.61
SMAD1-202ENST00000394092 IGHV4-30-4P0DP06 118 aa4.99□□□□□ -1.61
SMAD1-202ENST00000394092 XCL1P47992 114 aa4.99□□□□□ -1.61
SMAD1-202ENST00000394092 C5orf38Q86SI9 138 aa4.99□□□□□ -1.61
SMAD1-202ENST00000394092 SPATA3Q8NHX4 192 aa4.99□□□□□ -1.61
SMAD1-202ENST00000394092 NTN5Q8WTR8 489 aaPredicted RBP4.99□□□□□ -1.61
SMAD1-202ENST00000394092 CLEC2BQ92478 149 aa4.99□□□□□ -1.61
SMAD1-202ENST00000394092 SND1-IT1Q9HBX3 110 aa4.99□□□□□ -1.61
SMAD1-202ENST00000394092 TRACP01848 142 aa4.98□□□□□ -1.61
SMAD1-202ENST00000394092 CFAP161Q6P656 301 aa4.98□□□□□ -1.61
SMAD1-202ENST00000394092 CD164L2Q6UWJ8 174 aa4.98□□□□□ -1.61
SMAD1-202ENST00000394092 A0A096LPF7 62 aa4.97□□□□□ -1.61
SMAD1-202ENST00000394092 DEFB4AO15263 64 aa4.97□□□□□ -1.61
SMAD1-202ENST00000394092 ANGP03950 147 aaKnown RBP4.97□□□□□ -1.61
SMAD1-202ENST00000394092 RPL28P46779 137 aaKnown RBP4.97□□□□□ -1.61
SMAD1-202ENST00000394092 OXLD1Q5BKU9 147 aa4.97□□□□□ -1.61
SMAD1-202ENST00000394092 LELP1Q5T871 98 aa4.97□□□□□ -1.61
SMAD1-202ENST00000394092 MALP21145 153 aa4.96□□□□□ -1.61
SMAD1-202ENST00000394092 CKS1BP61024 79 aa4.96□□□□□ -1.61
SMAD1-202ENST00000394092 REG3AQ06141 175 aa4.96□□□□□ -1.61
SMAD1-202ENST00000394092 COX17Q14061 63 aa4.96□□□□□ -1.61
SMAD1-202ENST00000394092 CLPSL2Q6UWE3 100 aa4.96□□□□□ -1.61
SMAD1-202ENST00000394092 CDIP1Q9H305 208 aa4.96□□□□□ -1.61
SMAD1-202ENST00000394092 CELA1Q9UNI1 258 aa4.96□□□□□ -1.61
SMAD1-202ENST00000394092 TRAV8-4A0A0B4J246 113 aa4.96□□□□□ -1.62
SMAD1-202ENST00000394092 PFN2P35080 140 aa4.96□□□□□ -1.62
SMAD1-202ENST00000394092 CCL18P55774 89 aa4.96□□□□□ -1.62
SMAD1-202ENST00000394092 LINC00269Q8N2A0 174 aa4.96□□□□□ -1.62
SMAD1-202ENST00000394092 MUC7Q8TAX7 377 aa4.96□□□□□ -1.62
SMAD1-202ENST00000394092 CHCHD10Q8WYQ3 142 aaPredicted RBP4.96□□□□□ -1.62
SMAD1-202ENST00000394092 TEP1Q99973 2627 aaKnown RBP4.95□□□□□ -1.62
SMAD1-202ENST00000394092 TEX49A0A1B0GTD5 131 aa4.95□□□□□ -1.62
SMAD1-202ENST00000394092 H0YGX0 51 aa4.95□□□□□ -1.62
SMAD1-202ENST00000394092 HTN3P15516 51 aa4.95□□□□□ -1.62
SMAD1-202ENST00000394092 LINC00337Q8N6G1 96 aa4.95□□□□□ -1.62
SMAD1-202ENST00000394092 C11orf68Q9H3H3 251 aaKnown RBP4.95□□□□□ -1.62
SMAD1-202ENST00000394092 FAM240AA0A1B0GVK7 77 aa4.94□□□□□ -1.62
SMAD1-202ENST00000394092 H3BNG1 76 aa4.94□□□□□ -1.62
SMAD1-202ENST00000394092 DNAL4O96015 105 aa4.94□□□□□ -1.62
SMAD1-202ENST00000394092 DEFB121Q5J5C9 76 aa4.94□□□□□ -1.62
SMAD1-202ENST00000394092 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
SMAD1-202ENST00000394092 HIVEP1P15822 2718 aa4.94□□□□□ -1.62
SMAD1-202ENST00000394092 IGKV2-28A0A075B6P5 120 aa4.93□□□□□ -1.62
SMAD1-202ENST00000394092 NDUFC2O95298 119 aa4.93□□□□□ -1.62
SMAD1-202ENST00000394092 IGKV2D-28P01615 120 aa4.93□□□□□ -1.62
SMAD1-202ENST00000394092 ATRQ13535 2644 aa4.93□□□□□ -1.62
SMAD1-202ENST00000394092 SNCGO76070 127 aa4.92□□□□□ -1.62
SMAD1-202ENST00000394092 ACYP1P07311 99 aa4.92□□□□□ -1.62
SMAD1-202ENST00000394092 XGP55808 180 aa4.92□□□□□ -1.62
SMAD1-202ENST00000394092 VWFP04275 2813 aa4.92□□□□□ -1.62
SMAD1-202ENST00000394092 IGLV10-54A0A075B6I4 117 aa4.92□□□□□ -1.62
SMAD1-202ENST00000394092 A0A1B0GV72 72 aa4.92□□□□□ -1.62
SMAD1-202ENST00000394092 MT-ATP8P03928 68 aa4.92□□□□□ -1.62
SMAD1-202ENST00000394092 INAFM2P0DMQ5 153 aa4.92□□□□□ -1.62
SMAD1-202ENST00000394092 EGFEM1PQ0D2K5 195 aa4.92□□□□□ -1.62
SMAD1-202ENST00000394092 KIAA0087Q14695 138 aa4.92□□□□□ -1.62
SMAD1-202ENST00000394092 C3orf56Q8N813 242 aa4.92□□□□□ -1.62
SMAD1-202ENST00000394092 OR13C6PQ8NH95 151 aa4.92□□□□□ -1.62
SMAD1-202ENST00000394092 SMIM11BQ8TCY0 68 aa4.92□□□□□ -1.62
SMAD1-202ENST00000394092 PRR34Q9NV39 138 aa4.92□□□□□ -1.62
SMAD1-202ENST00000394092 KLK5Q9Y337 293 aaPredicted RBP4.92□□□□□ -1.62
SMAD1-202ENST00000394092 BAALC-AS2P0C853 105 aa4.91□□□□□ -1.62
SMAD1-202ENST00000394092 SPAG11BQ08648 103 aa4.91□□□□□ -1.62
SMAD1-202ENST00000394092 TENM1Q9UKZ4 2725 aa4.9□□□□□ -1.62
SMAD1-202ENST00000394092 A0A1B0GX51 115 aa4.9□□□□□ -1.62
SMAD1-202ENST00000394092 LYPD5Q6UWN5 251 aa4.9□□□□□ -1.62
SMAD1-202ENST00000394092 TMEM126AQ9H061 195 aa4.9□□□□□ -1.62
SMAD1-202ENST00000394092 F8P00451 2351 aa4.9□□□□□ -1.63
SMAD1-202ENST00000394092 KRTAP24-1Q3LI83 254 aa4.89□□□□□ -1.63
SMAD1-202ENST00000394092 Q6Q795 121 aa4.89□□□□□ -1.63
SMAD1-202ENST00000394092 FAM218AQ96MZ4 157 aa4.89□□□□□ -1.63
SMAD1-202ENST00000394092 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
SMAD1-202ENST00000394092 KLK12Q9UKR0 248 aa4.89□□□□□ -1.63
SMAD1-202ENST00000394092 NBEAL2Q6ZNJ1 2754 aa4.89□□□□□ -1.63
SMAD1-202ENST00000394092 GVQW2A0A096LPI5 108 aaPredicted RBP4.89□□□□□ -1.63
SMAD1-202ENST00000394092 A0A0J9YWU9 116 aa4.89□□□□□ -1.63
SMAD1-202ENST00000394092 KPRPQ5T749 579 aaPredicted RBP4.89□□□□□ -1.63
SMAD1-202ENST00000394092 KRTAP10-11P60412 298 aa4.88□□□□□ -1.63
SMAD1-202ENST00000394092 GAGE2BQ13066 116 aa4.88□□□□□ -1.63
SMAD1-202ENST00000394092 GAGE2EQ4V326 116 aa4.88□□□□□ -1.63
SMAD1-202ENST00000394092 C15orf53Q8NAA6 179 aa4.88□□□□□ -1.63
SMAD1-202ENST00000394092 GAGE2DQ9UEU5 116 aa4.88□□□□□ -1.63
SMAD1-202ENST00000394092 A0A087WYN8 130 aa4.87□□□□□ -1.63
SMAD1-202ENST00000394092 LECT2O14960 151 aa4.87□□□□□ -1.63
SMAD1-202ENST00000394092 ENHOQ6UWT2 76 aa4.87□□□□□ -1.63
SMAD1-202ENST00000394092 Q6ZTC4 211 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms