RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 NDUFC2-KCTD14E9PQ53 114 aa11.04□□□□□ -0.64
PDLIM7-205ENST00000393551 PRR26Q8N8Z3 221 aa11.04□□□□□ -0.64
PDLIM7-205ENST00000393551 RAB5BP61020 215 aa11.03□□□□□ -0.64
PDLIM7-205ENST00000393551 FAM19A3Q7Z5A8 133 aa11.03□□□□□ -0.64
PDLIM7-205ENST00000393551 C2orf88Q9BSF0 95 aa11.03□□□□□ -0.64
PDLIM7-205ENST00000393551 VCX2Q9H322 139 aa11.03□□□□□ -0.64
PDLIM7-205ENST00000393551 H0Y9J4 135 aa11.02□□□□□ -0.65
PDLIM7-205ENST00000393551 M0QXV9 152 aa11.02□□□□□ -0.65
PDLIM7-205ENST00000393551 TRGC2P03986 189 aa11.02□□□□□ -0.65
PDLIM7-205ENST00000393551 ORMDL2Q53FV1 153 aa11.02□□□□□ -0.65
PDLIM7-205ENST00000393551 DIRC1Q969H9 104 aa11.02□□□□□ -0.65
PDLIM7-205ENST00000393551 MRPL18Q9H0U6 180 aaKnown RBP11.02□□□□□ -0.65
PDLIM7-205ENST00000393551 K7EMI3 77 aa11.01□□□□□ -0.65
PDLIM7-205ENST00000393551 NPSP0C0P6 89 aa11.01□□□□□ -0.65
PDLIM7-205ENST00000393551 KRTAP1-4P0C5Y4 121 aa11.01□□□□□ -0.65
PDLIM7-205ENST00000393551 FABP9Q0Z7S8 132 aa11.01□□□□□ -0.65
PDLIM7-205ENST00000393551 Q6ZN92 141 aa11.01□□□□□ -0.65
PDLIM7-205ENST00000393551 PACRGQ96M98 296 aaPredicted RBP11□□□□□ -0.65
PDLIM7-205ENST00000393551 NXT2Q9NPJ8 142 aaKnown RBP10.99□□□□□ -0.65
PDLIM7-205ENST00000393551 TOMM7Q9P0U1 55 aa10.99□□□□□ -0.65
PDLIM7-205ENST00000393551 CDKN2A-AS1Q9UH64 79 aa10.99□□□□□ -0.65
PDLIM7-205ENST00000393551 KIAA1644Q3SXP7 199 aa10.98□□□□□ -0.65
PDLIM7-205ENST00000393551 Q8IZM0 81 aa10.98□□□□□ -0.65
PDLIM7-205ENST00000393551 UBE2BP63146 152 aa10.97□□□□□ -0.65
PDLIM7-205ENST00000393551 LINC00469Q8N7U9 141 aa10.97□□□□□ -0.65
PDLIM7-205ENST00000393551 TOMM6Q96B49 74 aa10.97□□□□□ -0.65
PDLIM7-205ENST00000393551 PRSS2P07478 247 aa10.96□□□□□ -0.65
PDLIM7-205ENST00000393551 C6orf226Q5I0X4 101 aa10.96□□□□□ -0.65
PDLIM7-205ENST00000393551 TIMM17AQ99595 171 aa10.96□□□□□ -0.65
PDLIM7-205ENST00000393551 ALKBH7Q9BT30 221 aaPredicted RBP10.96□□□□□ -0.65
PDLIM7-205ENST00000393551 CKS1BP61024 79 aa10.95□□□□□ -0.66
PDLIM7-205ENST00000393551 HERVK_113P63121 156 aa10.95□□□□□ -0.66
PDLIM7-205ENST00000393551 XAGE1AQ9HD64 81 aa10.95□□□□□ -0.66
PDLIM7-205ENST00000393551 HIST1H2BKO60814 126 aa10.94□□□□□ -0.66
PDLIM7-205ENST00000393551 HIST1H2BJP06899 126 aa10.94□□□□□ -0.66
PDLIM7-205ENST00000393551 HIST1H2BOP23527 126 aa10.94□□□□□ -0.66
PDLIM7-205ENST00000393551 HIST1H2BBP33778 126 aa10.94□□□□□ -0.66
PDLIM7-205ENST00000393551 HIST1H2BDP58876 126 aa10.94□□□□□ -0.66
PDLIM7-205ENST00000393551 HIST1H2BCP62807 126 aa10.94□□□□□ -0.66
PDLIM7-205ENST00000393551 HIST2H2BEQ16778 126 aa10.94□□□□□ -0.66
PDLIM7-205ENST00000393551 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.94□□□□□ -0.66
PDLIM7-205ENST00000393551 HIST1H2BHQ93079 126 aa10.94□□□□□ -0.66
PDLIM7-205ENST00000393551 HIST1H2BNQ99877 126 aa10.94□□□□□ -0.66
PDLIM7-205ENST00000393551 HIST1H2BMQ99879 126 aa10.94□□□□□ -0.66
PDLIM7-205ENST00000393551 C22orf24Q9Y442 160 aa10.94□□□□□ -0.66
PDLIM7-205ENST00000393551 S100A6P06703 90 aa10.92□□□□□ -0.66
PDLIM7-205ENST00000393551 COA6Q5JTJ3 125 aaKnown RBP10.92□□□□□ -0.66
PDLIM7-205ENST00000393551 PAPPA-AS1Q5QFB9 102 aa10.92□□□□□ -0.66
PDLIM7-205ENST00000393551 ERASQ7Z444 233 aa10.92□□□□□ -0.66
PDLIM7-205ENST00000393551 IGLV1-50A0A075B6I6 118 aa10.91□□□□□ -0.66
PDLIM7-205ENST00000393551 LINC01546A6NGU7 62 aa10.91□□□□□ -0.66
PDLIM7-205ENST00000393551 SMIM1B2RUZ4 78 aa10.91□□□□□ -0.66
PDLIM7-205ENST00000393551 F8VRH5 84 aa10.91□□□□□ -0.66
PDLIM7-205ENST00000393551 SEC11AP67812 179 aa10.91□□□□□ -0.66
PDLIM7-205ENST00000393551 GEMIN7Q9H840 131 aaKnown RBP10.91□□□□□ -0.66
PDLIM7-205ENST00000393551 G0S2P27469 103 aa10.9□□□□□ -0.66
PDLIM7-205ENST00000393551 SCGB3A1Q96QR1 104 aa10.9□□□□□ -0.66
PDLIM7-205ENST00000393551 TMA7Q9Y2S6 64 aaKnown RBP10.9□□□□□ -0.66
PDLIM7-205ENST00000393551 IGLV5-45A0A087WSX0 123 aa10.89□□□□□ -0.67
PDLIM7-205ENST00000393551 ZNF861PO60384 105 aa10.89□□□□□ -0.67
PDLIM7-205ENST00000393551 TINCRA0A1B0GVN0 87 aa10.88□□□□□ -0.67
PDLIM7-205ENST00000393551 NDUFA6P56556 154 aa10.87□□□□□ -0.67
PDLIM7-205ENST00000393551 C18orf32Q8TCD1 76 aa10.87□□□□□ -0.67
PDLIM7-205ENST00000393551 CST9LQ9H4G1 147 aa10.87□□□□□ -0.67
PDLIM7-205ENST00000393551 PDZD11Q5EBL8 140 aa10.86□□□□□ -0.67
PDLIM7-205ENST00000393551 BAGE3Q86Y29 109 aa10.86□□□□□ -0.67
PDLIM7-205ENST00000393551 TP73-AS1Q9UF72 201 aa10.86□□□□□ -0.67
PDLIM7-205ENST00000393551 C5orf52A6NGY3 159 aa10.85□□□□□ -0.67
PDLIM7-205ENST00000393551 NUPR1O60356 82 aa10.85□□□□□ -0.67
PDLIM7-205ENST00000393551 CXCL5P42830 114 aa10.85□□□□□ -0.67
PDLIM7-205ENST00000393551 MRPL55Q7Z7F7 128 aaKnown RBP10.85□□□□□ -0.67
PDLIM7-205ENST00000393551 COX7B2Q8TF08 81 aa10.85□□□□□ -0.67
PDLIM7-205ENST00000393551 LBHQ53QV2 105 aaPredicted RBP10.84□□□□□ -0.67
PDLIM7-205ENST00000393551 CHCHD1Q96BP2 118 aaKnown RBP10.84□□□□□ -0.67
PDLIM7-205ENST00000393551 SPINK8P0C7L1 97 aa10.83□□□□□ -0.68
PDLIM7-205ENST00000393551 RPL13AP40429 203 aaKnown RBP10.82□□□□□ -0.68
PDLIM7-205ENST00000393551 LINC00167Q96N53 147 aa10.82□□□□□ -0.68
PDLIM7-205ENST00000393551 MUC2Q02817 5179 aa10.82□□□□□ -0.68
PDLIM7-205ENST00000393551 RPL37AP8A6NKH3 93 aa10.81□□□□□ -0.68
PDLIM7-205ENST00000393551 LINC00614P0C842 121 aa10.81□□□□□ -0.68
PDLIM7-205ENST00000393551 SNRPEP62304 92 aaKnown RBP10.81□□□□□ -0.68
PDLIM7-205ENST00000393551 PMVKQ15126 192 aa10.81□□□□□ -0.68
PDLIM7-205ENST00000393551 A0A087X002 238 aa10.8□□□□□ -0.68
PDLIM7-205ENST00000393551 A0A096LNJ9 63 aa10.8□□□□□ -0.68
PDLIM7-205ENST00000393551 LINC01549A6NIU2 74 aa10.8□□□□□ -0.68
PDLIM7-205ENST00000393551 BCE1O60756 84 aa10.8□□□□□ -0.68
PDLIM7-205ENST00000393551 FA2HQ7L5A8 372 aa10.8□□□□□ -0.68
PDLIM7-205ENST00000393551 SERF1AO75920 110 aa10.79□□□□□ -0.68
PDLIM7-205ENST00000393551 URB1-AS1Q96HZ7 61 aa10.79□□□□□ -0.68
PDLIM7-205ENST00000393551 IGLV5-37A0A075B6J1 123 aa10.78□□□□□ -0.68
PDLIM7-205ENST00000393551 S100A2P29034 98 aa10.78□□□□□ -0.68
PDLIM7-205ENST00000393551 GAGE10A6NGK3 116 aa10.77□□□□□ -0.69
PDLIM7-205ENST00000393551 HSBP1O75506 76 aa10.77□□□□□ -0.69
PDLIM7-205ENST00000393551 KRTAP13-1Q8IUC0 172 aa10.77□□□□□ -0.69
PDLIM7-205ENST00000393551 HIST3H2BBQ8N257 126 aa10.77□□□□□ -0.69
PDLIM7-205ENST00000393551 IGLV5-39A0A0G2JS06 123 aa10.76□□□□□ -0.69
PDLIM7-205ENST00000393551 IGLC3P0DOY3 106 aa10.76□□□□□ -0.69
PDLIM7-205ENST00000393551 RPL28P46779 137 aaKnown RBP10.76□□□□□ -0.69
PDLIM7-205ENST00000393551 LINC00310P59036 64 aa10.75□□□□□ -0.69
PDLIM7-205ENST00000393551 PRR4Q16378 134 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms