RNA–Protein interactions for RNA: ENST00000392854.4

LYPD6-202, Transcript of LY6/PLAUR domain containing 6, humanhuman

TSL 1 (best)

Gene LYPD6, Length 1,580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD6-202ENST00000392854 KRTAP29-1A8MX34 341 aaPredicted RBP4.13□□□□□ -1.75
LYPD6-202ENST00000392854 B5MCH6 92 aa4.13□□□□□ -1.75
LYPD6-202ENST00000392854 NDUFA1O15239 70 aa4.13□□□□□ -1.75
LYPD6-202ENST00000392854 SEC11AP67812 179 aa4.13□□□□□ -1.75
LYPD6-202ENST00000392854 GAGE2BQ13066 116 aa4.13□□□□□ -1.75
LYPD6-202ENST00000392854 KIAA0087Q14695 138 aa4.13□□□□□ -1.75
LYPD6-202ENST00000392854 C7orf33Q8WU49 177 aa4.13□□□□□ -1.75
LYPD6-202ENST00000392854 SCGB3A1Q96QR1 104 aa4.13□□□□□ -1.75
LYPD6-202ENST00000392854 TRAPPC1Q9Y5R8 145 aa4.13□□□□□ -1.75
LYPD6-202ENST00000392854 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.12□□□□□ -1.75
LYPD6-202ENST00000392854 HERVK_113P63121 156 aa4.12□□□□□ -1.75
LYPD6-202ENST00000392854 UNQ6190/PRO20217Q6UXQ8 127 aa4.12□□□□□ -1.75
LYPD6-202ENST00000392854 FA2HQ7L5A8 372 aa4.12□□□□□ -1.75
LYPD6-202ENST00000392854 SMCO4Q9NRQ5 59 aa4.12□□□□□ -1.75
LYPD6-202ENST00000392854 A0A0J9YXV3 536 aa4.11□□□□□ -1.75
LYPD6-202ENST00000392854 HNRNPA3P51991 378 aaKnown RBP4.11□□□□□ -1.75
LYPD6-202ENST00000392854 RPL18AQ02543 176 aaKnown RBP4.11□□□□□ -1.75
LYPD6-202ENST00000392854 C10orf25Q5T742 122 aa4.11□□□□□ -1.75
LYPD6-202ENST00000392854 PLA2G2DQ9UNK4 145 aa4.11□□□□□ -1.75
LYPD6-202ENST00000392854 MYCBP2O75592 4640 aa4.11□□□□□ -1.75
LYPD6-202ENST00000392854 TRBV30A0A0K0K1B3 111 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 OXTP01178 125 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 LINC00614P0C842 121 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 TLX1NBP0CAT3 122 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 C18orf32Q8TCD1 76 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 GEMIN7Q9H840 131 aaKnown RBP4.1□□□□□ -1.75
LYPD6-202ENST00000392854 C6orf48Q9UBA6 75 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 CDKN2A-AS1Q9UH64 79 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 FLG2Q5D862 2391 aaPredicted RBP4.1□□□□□ -1.75
LYPD6-202ENST00000392854 TINCRA0A1B0GVN0 87 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 A0A1W2PNN7 141 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 PRSS2P07478 247 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 PMVKQ15126 192 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 C9orf116Q5BN46 136 aaPredicted RBP4.1□□□□□ -1.75
LYPD6-202ENST00000392854 C6orf226Q5I0X4 101 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 C2orf82Q6UX34 121 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 Q6ZRP5 223 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 Q8IZM0 81 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 URB1-AS1Q96HZ7 61 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 PACRGQ96M98 296 aaPredicted RBP4.1□□□□□ -1.75
LYPD6-202ENST00000392854 YPEL4Q96NS1 127 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 CST9LQ9H4G1 147 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 TOMM7Q9P0U1 55 aa4.1□□□□□ -1.75
LYPD6-202ENST00000392854 A0A096LNJ9 63 aa4.09□□□□□ -1.75
LYPD6-202ENST00000392854 RAB5BP61020 215 aa4.09□□□□□ -1.75
LYPD6-202ENST00000392854 CKS1BP61024 79 aa4.09□□□□□ -1.75
LYPD6-202ENST00000392854 IGLV5-45A0A087WSX0 123 aa4.08□□□□□ -1.76
LYPD6-202ENST00000392854 NDUFC2-KCTD14E9PQ53 114 aa4.08□□□□□ -1.76
LYPD6-202ENST00000392854 PRR3P79522 188 aaKnown RBP4.08□□□□□ -1.76
LYPD6-202ENST00000392854 GAGE2EQ4V326 116 aa4.08□□□□□ -1.76
LYPD6-202ENST00000392854 LINC00469Q8N7U9 141 aa4.08□□□□□ -1.76
LYPD6-202ENST00000392854 KRTAP9-8Q9BYQ0 159 aa4.08□□□□□ -1.76
LYPD6-202ENST00000392854 GAGE2DQ9UEU5 116 aa4.08□□□□□ -1.76
LYPD6-202ENST00000392854 SMIM1B2RUZ4 78 aa4.07□□□□□ -1.76
LYPD6-202ENST00000392854 HBDP02042 147 aa4.07□□□□□ -1.76
LYPD6-202ENST00000392854 CXCL5P42830 114 aa4.07□□□□□ -1.76
LYPD6-202ENST00000392854 PDZD11Q5EBL8 140 aa4.07□□□□□ -1.76
LYPD6-202ENST00000392854 SLC7A5P1Q8MH63 180 aa4.07□□□□□ -1.76
LYPD6-202ENST00000392854 HERC1Q15751 4861 aa4.07□□□□□ -1.76
LYPD6-202ENST00000392854 FAM168BA1KXE4 195 aa4.06□□□□□ -1.76
LYPD6-202ENST00000392854 F8VRH5 84 aa4.06□□□□□ -1.76
LYPD6-202ENST00000392854 ATP5LO75964 103 aa4.06□□□□□ -1.76
LYPD6-202ENST00000392854 NDUFA6P56556 154 aa4.06□□□□□ -1.76
LYPD6-202ENST00000392854 SRSF9Q13242 221 aaKnown RBP eCLIP4.06□□□□□ -1.76
LYPD6-202ENST00000392854 PMCHL1Q16048 86 aa4.06□□□□□ -1.76
LYPD6-202ENST00000392854 SPINK6Q6UWN8 80 aa4.06□□□□□ -1.76
LYPD6-202ENST00000392854 PHF5AQ7RTV0 110 aaKnown RBP4.06□□□□□ -1.76
LYPD6-202ENST00000392854 CBLN2Q8IUK8 224 aa4.06□□□□□ -1.76
LYPD6-202ENST00000392854 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
LYPD6-202ENST00000392854 PKHD1L1Q86WI1 4243 aa4.06□□□□□ -1.76
LYPD6-202ENST00000392854 LRP1Q07954 4544 aaKnown RBP4.06□□□□□ -1.76
LYPD6-202ENST00000392854 H3BRM9 83 aa4.06□□□□□ -1.76
LYPD6-202ENST00000392854 IGLC3P0DOY3 106 aa4.06□□□□□ -1.76
LYPD6-202ENST00000392854 C9orf129Q5T035 196 aaKnown RBP4.06□□□□□ -1.76
LYPD6-202ENST00000392854 SERTAD4-AS1Q5TG53 156 aa4.06□□□□□ -1.76
LYPD6-202ENST00000392854 COX7B2Q8TF08 81 aa4.06□□□□□ -1.76
LYPD6-202ENST00000392854 CHCHD1Q96BP2 118 aaKnown RBP4.06□□□□□ -1.76
LYPD6-202ENST00000392854 PSORS1C2Q9UIG4 136 aa4.06□□□□□ -1.76
LYPD6-202ENST00000392854 FAT3Q8TDW7 4589 aa4.05□□□□□ -1.76
LYPD6-202ENST00000392854 SPINK8P0C7L1 97 aa4.05□□□□□ -1.76
LYPD6-202ENST00000392854 FAM19A5Q7Z5A7 132 aaPredicted RBP4.05□□□□□ -1.76
LYPD6-202ENST00000392854 BAGE3Q86Y29 109 aa4.05□□□□□ -1.76
LYPD6-202ENST00000392854 KRTAP7-1Q8IUC3 87 aa4.05□□□□□ -1.76
LYPD6-202ENST00000392854 TRGC2P03986 189 aa4.04□□□□□ -1.76
LYPD6-202ENST00000392854 ZNF22P17026 224 aaPredicted RBP4.04□□□□□ -1.76
LYPD6-202ENST00000392854 C1orf137Q5JT78 98 aa4.04□□□□□ -1.76
LYPD6-202ENST00000392854 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
LYPD6-202ENST00000392854 DMBT1Q9UGM3 2413 aaPredicted RBP4.03□□□□□ -1.76
LYPD6-202ENST00000392854 IGLV5-39A0A0G2JS06 123 aa4.03□□□□□ -1.76
LYPD6-202ENST00000392854 M0QXV9 152 aa4.03□□□□□ -1.76
LYPD6-202ENST00000392854 TRIAP1O43715 76 aa4.03□□□□□ -1.76
LYPD6-202ENST00000392854 MT1HL1P0DM35 61 aa4.03□□□□□ -1.76
LYPD6-202ENST00000392854 LINC01600Q96MT4 127 aa4.03□□□□□ -1.76
LYPD6-202ENST00000392854 XAGE1AQ9HD64 81 aa4.03□□□□□ -1.76
LYPD6-202ENST00000392854 CHTOPQ9Y3Y2 248 aaKnown RBP4.03□□□□□ -1.76
LYPD6-202ENST00000392854 TRAV12-1A0A0B4J245 112 aa4.02□□□□□ -1.77
LYPD6-202ENST00000392854 C11orf86A6NJI1 115 aa4.02□□□□□ -1.77
LYPD6-202ENST00000392854 COLCA2A8K830 154 aa4.02□□□□□ -1.77
LYPD6-202ENST00000392854 HSBP1O75506 76 aa4.02□□□□□ -1.77
LYPD6-202ENST00000392854 UBE2BP63146 152 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms