RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 SEC11CQ9BY50 192 aa-6.7□□□□□ -3.48
TRAJ42-201ENST00000390495 NXT2Q9NPJ8 142 aaKnown RBP-6.7□□□□□ -3.48
TRAJ42-201ENST00000390495 LYRM2Q9NU23 88 aaPredicted RBP-6.7□□□□□ -3.48
TRAJ42-201ENST00000390495 LOC285095A0A1B0GVY8 99 aa-6.71□□□□□ -3.48
TRAJ42-201ENST00000390495 MGST2Q99735 147 aa-6.71□□□□□ -3.48
TRAJ42-201ENST00000390495 TRPC5OSA6NMA1 111 aa-6.72□□□□□ -3.49
TRAJ42-201ENST00000390495 MRPL54Q6P161 138 aaKnown RBP-6.72□□□□□ -3.49
TRAJ42-201ENST00000390495 PREX1Q8TCU6 1659 aa-6.73□□□□□ -3.49
TRAJ42-201ENST00000390495 PCNTO95613 3336 aa-6.73□□□□□ -3.49
TRAJ42-201ENST00000390495 TRBV7-7A0A0K0K1E9 115 aa-6.73□□□□□ -3.49
TRAJ42-201ENST00000390495 CETN3O15182 167 aa-6.73□□□□□ -3.49
TRAJ42-201ENST00000390495 NCOR1P1Q9H4R4 102 aa-6.73□□□□□ -3.49
TRAJ42-201ENST00000390495 SHROOM2Q13796 1616 aa-6.73□□□□□ -3.49
TRAJ42-201ENST00000390495 DCHS1Q96JQ0 3298 aa-6.74□□□□□ -3.49
TRAJ42-201ENST00000390495 TRAV13-2A0A0B4J235 113 aa-6.74□□□□□ -3.49
TRAJ42-201ENST00000390495 LIN52Q52LA3 116 aa-6.74□□□□□ -3.49
TRAJ42-201ENST00000390495 SMPXQ9UHP9 88 aa-6.74□□□□□ -3.49
TRAJ42-201ENST00000390495 LAMTOR2Q9Y2Q5 125 aa-6.74□□□□□ -3.49
TRAJ42-201ENST00000390495 TIMM8BQ9Y5J9 83 aaPredicted RBP-6.74□□□□□ -3.49
TRAJ42-201ENST00000390495 C3orf79P0CE67 100 aa-6.75□□□□□ -3.49
TRAJ42-201ENST00000390495 IFT140Q96RY7 1462 aa-6.75□□□□□ -3.49
TRAJ42-201ENST00000390495 MYOM1P52179 1685 aa-6.76□□□□□ -3.49
TRAJ42-201ENST00000390495 IGLV5-48A0A075B6I7 105 aa-6.76□□□□□ -3.49
TRAJ42-201ENST00000390495 LINC00158P58513 81 aa-6.76□□□□□ -3.49
TRAJ42-201ENST00000390495 LSM2Q9Y333 95 aaKnown RBP-6.76□□□□□ -3.49
TRAJ42-201ENST00000390495 ANKRD36CQ5JPF3 1778 aa-6.77□□□□□ -3.49
TRAJ42-201ENST00000390495 SCGB1A1P11684 91 aa-6.77□□□□□ -3.49
TRAJ42-201ENST00000390495 HLA-DRB4P13762 266 aa-6.77□□□□□ -3.49
TRAJ42-201ENST00000390495 MMGT1Q8N4V1 131 aa-6.77□□□□□ -3.49
TRAJ42-201ENST00000390495 TMEM191AQ9H0A3 160 aa-6.77□□□□□ -3.49
TRAJ42-201ENST00000390495 HLA-DRB4X5D2U9 266 aa-6.77□□□□□ -3.49
TRAJ42-201ENST00000390495 TAC4Q86UU9 113 aa-6.78□□□□□ -3.49
TRAJ42-201ENST00000390495 CDC26Q8NHZ8 85 aa-6.79□□□□□ -3.5
TRAJ42-201ENST00000390495 ARMC1Q9NVT9 282 aa-6.79□□□□□ -3.5
TRAJ42-201ENST00000390495 ARAP2Q8WZ64 1704 aa-6.79□□□□□ -3.5
TRAJ42-201ENST00000390495 MIC13Q5XKP0 118 aa-6.8□□□□□ -3.5
TRAJ42-201ENST00000390495 TRAPPC2LQ9UL33 140 aa-6.8□□□□□ -3.5
TRAJ42-201ENST00000390495 TMEM2Q9UHN6 1383 aa-6.81□□□□□ -3.5
TRAJ42-201ENST00000390495 EP400Q96L91 3159 aa-6.81□□□□□ -3.5
TRAJ42-201ENST00000390495 CUL7Q14999 1698 aa-6.81□□□□□ -3.5
TRAJ42-201ENST00000390495 NUP188Q5SRE5 1749 aa-6.81□□□□□ -3.5
TRAJ42-201ENST00000390495 LOC100506127A0A0U1RQW1 187 aa-6.82□□□□□ -3.5
TRAJ42-201ENST00000390495 E7EQ34 232 aa-6.82□□□□□ -3.5
TRAJ42-201ENST00000390495 IL5P05113 134 aa-6.82□□□□□ -3.5
TRAJ42-201ENST00000390495 UBE2L3P68036 154 aaKnown RBP-6.82□□□□□ -3.5
TRAJ42-201ENST00000390495 DEFB136Q30KP8 78 aa-6.82□□□□□ -3.5
TRAJ42-201ENST00000390495 C9orf153Q5TBE3 101 aa-6.82□□□□□ -3.5
TRAJ42-201ENST00000390495 CTAGE3PQ8IX95 158 aa-6.82□□□□□ -3.5
TRAJ42-201ENST00000390495 C9orf16Q9BUW7 83 aa-6.82□□□□□ -3.5
TRAJ42-201ENST00000390495 ARL2-SNX15V9GYD0 113 aa-6.82□□□□□ -3.5
TRAJ42-201ENST00000390495 MUC3AQ02505 3323 aa-6.82□□□□□ -3.5
TRAJ42-201ENST00000390495 TOGARAM1Q9Y4F4 1720 aa-6.82□□□□□ -3.5
TRAJ42-201ENST00000390495 SMIM24O75264 130 aa-6.83□□□□□ -3.5
TRAJ42-201ENST00000390495 NIPSNAP2O75323 286 aa-6.83□□□□□ -3.5
TRAJ42-201ENST00000390495 DEFB130BP0DP73 79 aa-6.83□□□□□ -3.5
TRAJ42-201ENST00000390495 DEFB130AP0DP74 79 aa-6.83□□□□□ -3.5
TRAJ42-201ENST00000390495 SNRNP25Q9BV90 132 aaKnown RBP-6.83□□□□□ -3.5
TRAJ42-201ENST00000390495 RGPD8O14715 1765 aaPredicted RBP-6.83□□□□□ -3.5
TRAJ42-201ENST00000390495 RGPD5Q99666 1765 aa-6.83□□□□□ -3.5
TRAJ42-201ENST00000390495 ANKRD30AQ9BXX3 1397 aa-6.83□□□□□ -3.5
TRAJ42-201ENST00000390495 TRBV20-1A0A075B6N2 111 aa-6.84□□□□□ -3.5
TRAJ42-201ENST00000390495 A0A1B0GWA3 101 aa-6.84□□□□□ -3.5
TRAJ42-201ENST00000390495 FAM9CQ8IZT9 166 aa-6.84□□□□□ -3.5
TRAJ42-201ENST00000390495 RGPD3A6NKT7 1758 aaPredicted RBP-6.85□□□□□ -3.51
TRAJ42-201ENST00000390495 RGPD4Q7Z3J3 1758 aa-6.85□□□□□ -3.51
TRAJ42-201ENST00000390495 SMARCA2P51531 1590 aa-6.85□□□□□ -3.51
TRAJ42-201ENST00000390495 USP32Q8NFA0 1604 aa-6.85□□□□□ -3.51
TRAJ42-201ENST00000390495 ZFYVE9O95405 1425 aa-6.85□□□□□ -3.51
TRAJ42-201ENST00000390495 MAGI3Q5TCQ9 1506 aa-6.86□□□□□ -3.51
TRAJ42-201ENST00000390495 A0A0G2JND7 137 aa-6.86□□□□□ -3.51
TRAJ42-201ENST00000390495 A8MTW9 85 aa-6.86□□□□□ -3.51
TRAJ42-201ENST00000390495 SNCGO76070 127 aa-6.86□□□□□ -3.51
TRAJ42-201ENST00000390495 SAA2P0DJI9 122 aaPredicted RBP-6.86□□□□□ -3.51
TRAJ42-201ENST00000390495 PPP1R2P3Q6NXS1 205 aa-6.86□□□□□ -3.51
TRAJ42-201ENST00000390495 SS18L2Q9UHA2 77 aa-6.86□□□□□ -3.51
TRAJ42-201ENST00000390495 MED31Q9Y3C7 131 aa-6.86□□□□□ -3.51
TRAJ42-201ENST00000390495 ABCC5O15440 1437 aa-6.86□□□□□ -3.51
TRAJ42-201ENST00000390495 MAST1Q9Y2H9 1570 aa-6.86□□□□□ -3.51
TRAJ42-201ENST00000390495 MAP3K5Q99683 1374 aa-6.87□□□□□ -3.51
TRAJ42-201ENST00000390495 ARMS2P0C7Q2 107 aa-6.88□□□□□ -3.51
TRAJ42-201ENST00000390495 TMEM128Q5BJH2 165 aa-6.88□□□□□ -3.51
TRAJ42-201ENST00000390495 SPTSSAQ969W0 71 aa-6.88□□□□□ -3.51
TRAJ42-201ENST00000390495 BANF2Q9H503 90 aa-6.88□□□□□ -3.51
TRAJ42-201ENST00000390495 ADGRL2O95490 1459 aa-6.88□□□□□ -3.51
TRAJ42-201ENST00000390495 TNRC6CQ9HCJ0 1690 aaKnown RBP-6.88□□□□□ -3.51
TRAJ42-201ENST00000390495 CRYBG1Q9Y4K1 1723 aa-6.88□□□□□ -3.51
TRAJ42-201ENST00000390495 TSLPQ969D9 159 aa-6.89□□□□□ -3.51
TRAJ42-201ENST00000390495 CALML5Q9NZT1 146 aa-6.89□□□□□ -3.51
TRAJ42-201ENST00000390495 NDUFB6O95139 128 aa-6.9□□□□□ -3.51
TRAJ42-201ENST00000390495 DYDC1Q8WWB3 177 aa-6.9□□□□□ -3.51
TRAJ42-201ENST00000390495 ATG12O94817 140 aa-6.91□□□□□ -3.52
TRAJ42-201ENST00000390495 SERP2Q8N6R1 65 aa-6.91□□□□□ -3.52
TRAJ42-201ENST00000390495 WIZO95785 1651 aa-6.92□□□□□ -3.52
TRAJ42-201ENST00000390495 SCN7AQ01118 1682 aa-6.92□□□□□ -3.52
TRAJ42-201ENST00000390495 IAPPP10997 89 aa-6.92□□□□□ -3.52
TRAJ42-201ENST00000390495 SZT2Q5T011 3432 aa-6.92□□□□□ -3.52
TRAJ42-201ENST00000390495 SAR1AQ9NR31 198 aa-6.93□□□□□ -3.52
TRAJ42-201ENST00000390495 LY75O60449 1722 aa-6.93□□□□□ -3.52
TRAJ42-201ENST00000390495 DEPDC5O75140 1603 aa-6.94□□□□□ -3.52
TRAJ42-201ENST00000390495 CCDC42Q96M95 316 aa-6.94□□□□□ -3.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms