RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 ADGBQ8N7X0 1667 aa-4.68□□□□□ -3.16
RNU6-1340P-201ENST00000384438 EHBP1L1Q8N3D4 1523 aa-4.68□□□□□ -3.16
RNU6-1340P-201ENST00000384438 NRXN1Q9ULB1 1477 aa-4.69□□□□□ -3.16
RNU6-1340P-201ENST00000384438 TRBV27A0A0K0K1C4 114 aa-4.69□□□□□ -3.16
RNU6-1340P-201ENST00000384438 LOC285095A0A1B0GVY8 99 aa-4.69□□□□□ -3.16
RNU6-1340P-201ENST00000384438 H0Y9P7 68 aa-4.69□□□□□ -3.16
RNU6-1340P-201ENST00000384438 J3QLW9 94 aa-4.69□□□□□ -3.16
RNU6-1340P-201ENST00000384438 C9orf153Q5TBE3 101 aa-4.69□□□□□ -3.16
RNU6-1340P-201ENST00000384438 FAM45BPQ6NSW5 357 aa-4.69□□□□□ -3.16
RNU6-1340P-201ENST00000384438 OR51D1Q8NGF3 324 aa-4.69□□□□□ -3.16
RNU6-1340P-201ENST00000384438 MGARPQ8TDB4 240 aa-4.69□□□□□ -3.16
RNU6-1340P-201ENST00000384438 TSGA13Q96PP4 275 aa-4.69□□□□□ -3.16
RNU6-1340P-201ENST00000384438 TMEM191AQ9H0A3 160 aa-4.69□□□□□ -3.16
RNU6-1340P-201ENST00000384438 PKIGQ9Y2B9 76 aa-4.69□□□□□ -3.16
RNU6-1340P-201ENST00000384438 NEXMIFQ5QGS0 1516 aa-4.69□□□□□ -3.16
RNU6-1340P-201ENST00000384438 FAM135AQ9P2D6 1515 aa-4.69□□□□□ -3.16
RNU6-1340P-201ENST00000384438 SPEF2Q9C093 1822 aa-4.69□□□□□ -3.16
RNU6-1340P-201ENST00000384438 KIAA0586Q9BVV6 1533 aa-4.7□□□□□ -3.16
RNU6-1340P-201ENST00000384438 RNF103-CHMP3A0A140T963 221 aa-4.7□□□□□ -3.16
RNU6-1340P-201ENST00000384438 DCTN3O75935 186 aa-4.7□□□□□ -3.16
RNU6-1340P-201ENST00000384438 RPL12P30050 165 aaKnown RBP-4.7□□□□□ -3.16
RNU6-1340P-201ENST00000384438 SPANXN1Q5VSR9 72 aa-4.7□□□□□ -3.16
RNU6-1340P-201ENST00000384438 PDCL2Q8N4E4 241 aa-4.7□□□□□ -3.16
RNU6-1340P-201ENST00000384438 HDDC3Q8N4P3 179 aa-4.7□□□□□ -3.16
RNU6-1340P-201ENST00000384438 LSM2Q9Y333 95 aaKnown RBP-4.7□□□□□ -3.16
RNU6-1340P-201ENST00000384438 COMMD10Q9Y6G5 202 aa-4.7□□□□□ -3.16
RNU6-1340P-201ENST00000384438 PIK3C2GO75747 1445 aa-4.71□□□□□ -3.16
RNU6-1340P-201ENST00000384438 PREX2Q70Z35 1606 aa-4.71□□□□□ -3.16
RNU6-1340P-201ENST00000384438 A0A1B0GWA3 101 aa-4.71□□□□□ -3.16
RNU6-1340P-201ENST00000384438 TMEM213A2RRL7 107 aa-4.71□□□□□ -3.16
RNU6-1340P-201ENST00000384438 RPL7P18124 248 aaKnown RBP-4.71□□□□□ -3.16
RNU6-1340P-201ENST00000384438 PSME3P61289 254 aa-4.71□□□□□ -3.16
RNU6-1340P-201ENST00000384438 RPL38P63173 70 aaKnown RBP-4.71□□□□□ -3.16
RNU6-1340P-201ENST00000384438 DNAL1Q4LDG9 190 aa-4.71□□□□□ -3.16
RNU6-1340P-201ENST00000384438 DNM1P34Q6PK57 102 aa-4.71□□□□□ -3.16
RNU6-1340P-201ENST00000384438 CCDC170Q8IYT3 715 aa-4.71□□□□□ -3.16
RNU6-1340P-201ENST00000384438 SLC35B4Q969S0 331 aa-4.71□□□□□ -3.16
RNU6-1340P-201ENST00000384438 ARL2-SNX15V9GYD0 113 aa-4.71□□□□□ -3.16
RNU6-1340P-201ENST00000384438 NWD1Q149M9 1564 aa-4.71□□□□□ -3.16
RNU6-1340P-201ENST00000384438 ARAP2Q8WZ64 1704 aa-4.72□□□□□ -3.16
RNU6-1340P-201ENST00000384438 IFT140Q96RY7 1462 aa-4.72□□□□□ -3.16
RNU6-1340P-201ENST00000384438 A6NIN4 97 aa-4.72□□□□□ -3.17
RNU6-1340P-201ENST00000384438 CHP2O43745 196 aa-4.72□□□□□ -3.17
RNU6-1340P-201ENST00000384438 NDUFC2O95298 119 aa-4.72□□□□□ -3.17
RNU6-1340P-201ENST00000384438 IFNA14P01570 189 aa-4.72□□□□□ -3.17
RNU6-1340P-201ENST00000384438 PVALBP20472 110 aaPredicted RBP-4.72□□□□□ -3.17
RNU6-1340P-201ENST00000384438 CBLN1P23435 193 aa-4.72□□□□□ -3.17
RNU6-1340P-201ENST00000384438 DAOAP59103 153 aa-4.72□□□□□ -3.17
RNU6-1340P-201ENST00000384438 CLVS2Q5SYC1 327 aa-4.72□□□□□ -3.17
RNU6-1340P-201ENST00000384438 TSLPQ969D9 159 aa-4.72□□□□□ -3.17
RNU6-1340P-201ENST00000384438 USE1Q9NZ43 259 aa-4.72□□□□□ -3.17
RNU6-1340P-201ENST00000384438 GCNT4Q9P109 453 aa-4.72□□□□□ -3.17
RNU6-1340P-201ENST00000384438 MRC2Q9UBG0 1479 aa-4.73□□□□□ -3.17
RNU6-1340P-201ENST00000384438 HMGB3O15347 200 aaKnown RBP-4.73□□□□□ -3.17
RNU6-1340P-201ENST00000384438 OCMP0CE72 109 aaPredicted RBP-4.73□□□□□ -3.17
RNU6-1340P-201ENST00000384438 GAP43P17677 238 aa-4.73□□□□□ -3.17
RNU6-1340P-201ENST00000384438 LSM3P62310 102 aaKnown RBP-4.73□□□□□ -3.17
RNU6-1340P-201ENST00000384438 NCBP2-AS2Q69YL0 99 aa-4.73□□□□□ -3.17
RNU6-1340P-201ENST00000384438 DEFB107AQ8IZN7 70 aa-4.73□□□□□ -3.17
RNU6-1340P-201ENST00000384438 LAMTOR2Q9Y2Q5 125 aa-4.73□□□□□ -3.17
RNU6-1340P-201ENST00000384438 TJP1Q07157 1748 aa-4.73□□□□□ -3.17
RNU6-1340P-201ENST00000384438 ABCA3Q99758 1704 aa-4.73□□□□□ -3.17
RNU6-1340P-201ENST00000384438 KIF14Q15058 1648 aa-4.73□□□□□ -3.17
RNU6-1340P-201ENST00000384438 SNAPC4Q5SXM2 1469 aa-4.74□□□□□ -3.17
RNU6-1340P-201ENST00000384438 ROCK1Q13464 1354 aa-4.74□□□□□ -3.17
RNU6-1340P-201ENST00000384438 TNFSF15O95150 251 aa-4.74□□□□□ -3.17
RNU6-1340P-201ENST00000384438 IFNA7P01567 189 aa-4.74□□□□□ -3.17
RNU6-1340P-201ENST00000384438 FABP2P12104 132 aa-4.74□□□□□ -3.17
RNU6-1340P-201ENST00000384438 HMGA1P17096 107 aaKnown RBP-4.74□□□□□ -3.17
RNU6-1340P-201ENST00000384438 GNGT1P63211 74 aa-4.74□□□□□ -3.17
RNU6-1340P-201ENST00000384438 RWDD1Q9H446 243 aaPredicted RBP-4.74□□□□□ -3.17
RNU6-1340P-201ENST00000384438 OTORQ9NRC9 128 aa-4.74□□□□□ -3.17
RNU6-1340P-201ENST00000384438 MAP3K4Q9Y6R4 1608 aa-4.75□□□□□ -3.17
RNU6-1340P-201ENST00000384438 C5P01031 1676 aa-4.75□□□□□ -3.17
RNU6-1340P-201ENST00000384438 TGIF2-C20orf24A0A0A6YYL0 155 aa-4.75□□□□□ -3.17
RNU6-1340P-201ENST00000384438 TRAV13-2A0A0B4J235 113 aa-4.75□□□□□ -3.17
RNU6-1340P-201ENST00000384438 H3BQF6 201 aa-4.75□□□□□ -3.17
RNU6-1340P-201ENST00000384438 LEPROTL1O95214 131 aa-4.75□□□□□ -3.17
RNU6-1340P-201ENST00000384438 CCDC70Q6NSX1 233 aa-4.75□□□□□ -3.17
RNU6-1340P-201ENST00000384438 DEFB104AQ8WTQ1 72 aa-4.75□□□□□ -3.17
RNU6-1340P-201ENST00000384438 TSEN15Q8WW01 171 aaKnown RBP-4.75□□□□□ -3.17
RNU6-1340P-201ENST00000384438 AHSPQ9NZD4 102 aa-4.75□□□□□ -3.17
RNU6-1340P-201ENST00000384438 KDM5CP41229 1560 aa-4.75□□□□□ -3.17
RNU6-1340P-201ENST00000384438 CSN2P05814 226 aa-4.76□□□□□ -3.17
RNU6-1340P-201ENST00000384438 OCM2P0CE71 109 aa-4.76□□□□□ -3.17
RNU6-1340P-201ENST00000384438 MYL12AP19105 171 aa-4.76□□□□□ -3.17
RNU6-1340P-201ENST00000384438 FAM228AQ86W67 206 aa-4.76□□□□□ -3.17
RNU6-1340P-201ENST00000384438 BORCS7-ASMTA0A0B4J1R7 106 aa-4.77□□□□□ -3.17
RNU6-1340P-201ENST00000384438 CRYGCP07315 174 aa-4.77□□□□□ -3.17
RNU6-1340P-201ENST00000384438 SRP9P49458 86 aaKnown RBP-4.77□□□□□ -3.17
RNU6-1340P-201ENST00000384438 ATP5J2P56134 94 aa-4.77□□□□□ -3.17
RNU6-1340P-201ENST00000384438 MRPS25P82663 173 aaKnown RBP-4.77□□□□□ -3.17
RNU6-1340P-201ENST00000384438 HSP90AB2PQ58FF8 381 aa-4.77□□□□□ -3.17
RNU6-1340P-201ENST00000384438 TAS2R42Q7RTR8 314 aa-4.77□□□□□ -3.17
RNU6-1340P-201ENST00000384438 OTUD6BQ8N6M0 293 aa-4.77□□□□□ -3.17
RNU6-1340P-201ENST00000384438 GPATCH11Q8N954 259 aa-4.77□□□□□ -3.17
RNU6-1340P-201ENST00000384438 BORCS7Q96B45 105 aa-4.77□□□□□ -3.17
RNU6-1340P-201ENST00000384438 BORCS8Q96FH0 119 aa-4.77□□□□□ -3.17
RNU6-1340P-201ENST00000384438 PRNDQ9UKY0 176 aa-4.77□□□□□ -3.17
RNU6-1340P-201ENST00000384438 AP4S1Q9Y587 144 aa-4.77□□□□□ -3.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms