RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 CFAP161Q6P656 301 aa13.07□□□□□ -0.32
CCM2-202ENST00000381112 SPANXDQ9BXN6 97 aa13.07□□□□□ -0.32
CCM2-202ENST00000381112 SPANXCQ9NY87 97 aa13.07□□□□□ -0.32
CCM2-202ENST00000381112 C2orf82Q6UX34 121 aa13.06□□□□□ -0.32
CCM2-202ENST00000381112 CXCL5P42830 114 aa13.06□□□□□ -0.32
CCM2-202ENST00000381112 CKS1BP61024 79 aa13.06□□□□□ -0.32
CCM2-202ENST00000381112 MEIG1Q5JSS6 88 aa13.06□□□□□ -0.32
CCM2-202ENST00000381112 WWC2-AS2Q96NR7 200 aa13.06□□□□□ -0.32
CCM2-202ENST00000381112 PTTG1IPP53801 180 aa13.05□□□□□ -0.32
CCM2-202ENST00000381112 Q6ZVH6 145 aa13.05□□□□□ -0.32
CCM2-202ENST00000381112 RMI2Q96E14 147 aa13.05□□□□□ -0.32
CCM2-202ENST00000381112 C15orf56Q8N910 161 aa13.04□□□□□ -0.32
CCM2-202ENST00000381112 SMIM13P0DJ93 91 aa13.04□□□□□ -0.32
CCM2-202ENST00000381112 A6NDN8 102 aa13.03□□□□□ -0.32
CCM2-202ENST00000381112 MUSTN1Q8IVN3 82 aa13.03□□□□□ -0.32
CCM2-202ENST00000381112 C6orf223Q8N319 242 aa13.03□□□□□ -0.32
CCM2-202ENST00000381112 DAND5Q8N907 189 aa13.03□□□□□ -0.32
CCM2-202ENST00000381112 DNAH1Q9P2D7 4330 aa13.03□□□□□ -0.32
CCM2-202ENST00000381112 A0A0U1RRA0 63 aa13.02□□□□□ -0.32
CCM2-202ENST00000381112 LINC00526Q96FQ7 95 aa13.02□□□□□ -0.32
CCM2-202ENST00000381112 NTN5Q8WTR8 489 aaPredicted RBP13.01□□□□□ -0.33
CCM2-202ENST00000381112 ERG28Q9UKR5 140 aa13.01□□□□□ -0.33
CCM2-202ENST00000381112 IFITM1P13164 125 aa12.99□□□□□ -0.33
CCM2-202ENST00000381112 HIGD2BQ4VC39 106 aa12.99□□□□□ -0.33
CCM2-202ENST00000381112 CASC10Q5T4H9 136 aa12.99□□□□□ -0.33
CCM2-202ENST00000381112 UNQ6190/PRO20217Q6UXQ8 127 aa12.99□□□□□ -0.33
CCM2-202ENST00000381112 NHP2Q9NX24 153 aaKnown RBP12.99□□□□□ -0.33
CCM2-202ENST00000381112 COX11Q9Y6N1 276 aa12.99□□□□□ -0.33
CCM2-202ENST00000381112 NBDYA0A0U1RRE5 68 aa12.99□□□□□ -0.33
CCM2-202ENST00000381112 TMEM238LA0A1B0GVL6 79 aa12.99□□□□□ -0.33
CCM2-202ENST00000381112 A6NJY4 79 aa12.99□□□□□ -0.33
CCM2-202ENST00000381112 TTC32Q5I0X7 151 aa12.99□□□□□ -0.33
CCM2-202ENST00000381112 C10orf25Q5T742 122 aa12.99□□□□□ -0.33
CCM2-202ENST00000381112 GVQW2A0A096LPI5 108 aaPredicted RBP12.98□□□□□ -0.33
CCM2-202ENST00000381112 A0A1B0GWB2 263 aa12.98□□□□□ -0.33
CCM2-202ENST00000381112 ZNF561-AS1K7EIQ3 104 aa12.98□□□□□ -0.33
CCM2-202ENST00000381112 EIF4EBP3O60516 100 aaPredicted RBP12.98□□□□□ -0.33
CCM2-202ENST00000381112 LINC00158P58513 81 aa12.98□□□□□ -0.33
CCM2-202ENST00000381112 RPL24P83731 157 aaKnown RBP12.98□□□□□ -0.33
CCM2-202ENST00000381112 K7ERJ3 54 aa12.97□□□□□ -0.33
CCM2-202ENST00000381112 NPC2P61916 151 aa12.97□□□□□ -0.33
CCM2-202ENST00000381112 LINC00308Q8TCZ7 52 aa12.97□□□□□ -0.33
CCM2-202ENST00000381112 A4D1N5 150 aa12.97□□□□□ -0.33
CCM2-202ENST00000381112 TAX1BP3O14907 124 aa12.97□□□□□ -0.33
CCM2-202ENST00000381112 PFN2P35080 140 aa12.97□□□□□ -0.33
CCM2-202ENST00000381112 MIR7-3HGQ8N6C7 128 aa12.97□□□□□ -0.33
CCM2-202ENST00000381112 SOSTDC1Q6X4U4 206 aa12.95□□□□□ -0.34
CCM2-202ENST00000381112 C2orf48Q96LS8 159 aa12.95□□□□□ -0.34
CCM2-202ENST00000381112 VPS13DQ5THJ4 4388 aa12.95□□□□□ -0.34
CCM2-202ENST00000381112 COX17Q14061 63 aa12.95□□□□□ -0.34
CCM2-202ENST00000381112 C9orf116Q5BN46 136 aaPredicted RBP12.95□□□□□ -0.34
CCM2-202ENST00000381112 USP17L23D6RBM5 183 aa12.94□□□□□ -0.34
CCM2-202ENST00000381112 COPS9Q8WXC6 57 aa12.94□□□□□ -0.34
CCM2-202ENST00000381112 PPDPFQ9H3Y8 114 aa12.94□□□□□ -0.34
CCM2-202ENST00000381112 CFC1BP0CG36 223 aa12.93□□□□□ -0.34
CCM2-202ENST00000381112 CFC1P0CG37 223 aa12.93□□□□□ -0.34
CCM2-202ENST00000381112 CAMK2N2Q96S95 79 aa12.93□□□□□ -0.34
CCM2-202ENST00000381112 C6orf48Q9UBA6 75 aa12.93□□□□□ -0.34
CCM2-202ENST00000381112 F8WDY8 70 aa12.92□□□□□ -0.34
CCM2-202ENST00000381112 RAB37Q96AX2 223 aa12.91□□□□□ -0.34
CCM2-202ENST00000381112 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.91□□□□□ -0.34
CCM2-202ENST00000381112 A0A1B0GV90 55 aa12.91□□□□□ -0.34
CCM2-202ENST00000381112 TRBV30A0A0K0K1B3 111 aa12.9□□□□□ -0.34
CCM2-202ENST00000381112 C3orf84H3BNL1 204 aa12.9□□□□□ -0.34
CCM2-202ENST00000381112 Q6ZRU5 148 aa12.9□□□□□ -0.34
CCM2-202ENST00000381112 A0A0B4J2C4 111 aa12.89□□□□□ -0.35
CCM2-202ENST00000381112 LECT2O14960 151 aa12.89□□□□□ -0.35
CCM2-202ENST00000381112 PSCAO43653 123 aa12.88□□□□□ -0.35
CCM2-202ENST00000381112 SYCNQ0VAF6 134 aa12.87□□□□□ -0.35
CCM2-202ENST00000381112 C9orf118A6NHY6 69 aa12.87□□□□□ -0.35
CCM2-202ENST00000381112 M0R2N4 97 aa12.87□□□□□ -0.35
CCM2-202ENST00000381112 WFDC2Q14508 124 aa12.87□□□□□ -0.35
CCM2-202ENST00000381112 LOC107984156A0A0G2JMH3 177 aa12.86□□□□□ -0.35
CCM2-202ENST00000381112 SLPIP03973 132 aa12.86□□□□□ -0.35
CCM2-202ENST00000381112 Q6ZR54 194 aa12.86□□□□□ -0.35
CCM2-202ENST00000381112 Q6ZRN7 208 aaPredicted RBP12.86□□□□□ -0.35
CCM2-202ENST00000381112 ARL17AQ8IVW1 177 aa12.86□□□□□ -0.35
CCM2-202ENST00000381112 SND1-IT1Q9HBX3 110 aa12.85□□□□□ -0.35
CCM2-202ENST00000381112 PRO1854Q9UHT4 67 aa12.85□□□□□ -0.35
CCM2-202ENST00000381112 LY6G6CO95867 125 aa12.85□□□□□ -0.35
CCM2-202ENST00000381112 LINC00476Q8WZB0 136 aa12.85□□□□□ -0.35
CCM2-202ENST00000381112 NAA38Q9BRA0 125 aaKnown RBP12.84□□□□□ -0.35
CCM2-202ENST00000381112 H3BUT2 72 aa12.82□□□□□ -0.36
CCM2-202ENST00000381112 CARD19Q96LW7 228 aa12.82□□□□□ -0.36
CCM2-202ENST00000381112 PGPEP1Q9NXJ5 209 aa12.82□□□□□ -0.36
CCM2-202ENST00000381112 RNF151Q2KHN1 245 aa12.81□□□□□ -0.36
CCM2-202ENST00000381112 DNAH10Q8IVF4 4471 aa12.81□□□□□ -0.36
CCM2-202ENST00000381112 TSPAN13O95857 204 aa12.8□□□□□ -0.36
CCM2-202ENST00000381112 LRCOL1A6NCL2 159 aa12.8□□□□□ -0.36
CCM2-202ENST00000381112 NDUFC2-KCTD14E9PQ53 114 aa12.8□□□□□ -0.36
CCM2-202ENST00000381112 IGKV2-28A0A075B6P5 120 aa12.79□□□□□ -0.36
CCM2-202ENST00000381112 IGKV2D-28P01615 120 aa12.79□□□□□ -0.36
CCM2-202ENST00000381112 A0A1W2PPM0 123 aa12.78□□□□□ -0.36
CCM2-202ENST00000381112 C14orf177Q52M58 125 aa12.78□□□□□ -0.36
CCM2-202ENST00000381112 NDUFC2O95298 119 aa12.76□□□□□ -0.37
CCM2-202ENST00000381112 H7C2G1 150 aa12.76□□□□□ -0.37
CCM2-202ENST00000381112 TLX1NBP0CAT3 122 aa12.76□□□□□ -0.37
CCM2-202ENST00000381112 RPL13AP40429 203 aaKnown RBP12.76□□□□□ -0.37
CCM2-202ENST00000381112 Q6ZRP5 223 aa12.76□□□□□ -0.37
CCM2-202ENST00000381112 XAGE1AQ9HD64 81 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms