RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 IGKV3-20P01619 116 aa6.66□□□□□ -1.34
PTPRA-204ENST00000380393 RNASE1P07998 156 aaKnown RBP6.66□□□□□ -1.34
PTPRA-204ENST00000380393 TRAV22A0A0B4J277 110 aa6.65□□□□□ -1.34
PTPRA-204ENST00000380393 NAV2Q8IVL1 2488 aa6.65□□□□□ -1.34
PTPRA-204ENST00000380393 hDV103S1A0JD37 113 aa6.65□□□□□ -1.34
PTPRA-204ENST00000380393 M0QY20 66 aa6.65□□□□□ -1.34
PTPRA-204ENST00000380393 TLN2Q9Y4G6 2542 aa6.65□□□□□ -1.35
PTPRA-204ENST00000380393 NDUFS5O43920 106 aa6.65□□□□□ -1.35
PTPRA-204ENST00000380393 FAM104AQ969W3 186 aa6.65□□□□□ -1.35
PTPRA-204ENST00000380393 RNF5Q99942 180 aa6.65□□□□□ -1.35
PTPRA-204ENST00000380393 KAAG1Q9UBP8 84 aa6.65□□□□□ -1.35
PTPRA-204ENST00000380393 LENEPQ9Y5L5 61 aa6.65□□□□□ -1.35
PTPRA-204ENST00000380393 APCP25054 2843 aa6.65□□□□□ -1.35
PTPRA-204ENST00000380393 ZNF469Q96JG9 3925 aaPredicted RBP6.64□□□□□ -1.35
PTPRA-204ENST00000380393 HTN1P15515 57 aa6.64□□□□□ -1.35
PTPRA-204ENST00000380393 SYCNQ0VAF6 134 aa6.64□□□□□ -1.35
PTPRA-204ENST00000380393 FLNBO75369 2602 aaKnown RBP6.64□□□□□ -1.35
PTPRA-204ENST00000380393 LYRM9A8MSI8 78 aa6.64□□□□□ -1.35
PTPRA-204ENST00000380393 UBE2L6O14933 153 aa6.64□□□□□ -1.35
PTPRA-204ENST00000380393 LINC01356Q8N9X3 169 aa6.64□□□□□ -1.35
PTPRA-204ENST00000380393 KLK9Q9UKQ9 250 aa6.64□□□□□ -1.35
PTPRA-204ENST00000380393 CSPG4Q6UVK1 2322 aa6.64□□□□□ -1.35
PTPRA-204ENST00000380393 A8MUN3 132 aa6.63□□□□□ -1.35
PTPRA-204ENST00000380393 SND1-IT1Q9HBX3 110 aa6.63□□□□□ -1.35
PTPRA-204ENST00000380393 C2CD3Q4AC94 2353 aa6.63□□□□□ -1.35
PTPRA-204ENST00000380393 ATP6V0E1O15342 81 aa6.63□□□□□ -1.35
PTPRA-204ENST00000380393 ANKRD17O75179 2603 aaKnown RBP6.63□□□□□ -1.35
PTPRA-204ENST00000380393 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.62□□□□□ -1.359e-12■■■■■ 45
PTPRA-204ENST00000380393 IGHV7-81A0A0B4J1V7 117 aa6.62□□□□□ -1.35
PTPRA-204ENST00000380393 IGHV3-38A0A0C4DH36 116 aa6.62□□□□□ -1.35
PTPRA-204ENST00000380393 TRBV10-1A0A0K0K1A3 114 aa6.62□□□□□ -1.35
PTPRA-204ENST00000380393 FBXL19-AS1Q494R0 122 aa6.62□□□□□ -1.35
PTPRA-204ENST00000380393 KHDC1LQ5JSQ8 128 aa6.62□□□□□ -1.35
PTPRA-204ENST00000380393 IGKV2-28A0A075B6P5 120 aa6.62□□□□□ -1.35
PTPRA-204ENST00000380393 IGHV3-73A0A0B4J1V6 119 aa6.62□□□□□ -1.35
PTPRA-204ENST00000380393 IGKV2D-28P01615 120 aa6.62□□□□□ -1.35
PTPRA-204ENST00000380393 IGHV3-11P01762 117 aa6.62□□□□□ -1.35
PTPRA-204ENST00000380393 SCXQ7RTU7 201 aa6.62□□□□□ -1.35
PTPRA-204ENST00000380393 NPBQ8NG41 125 aa6.61□□□□□ -1.35
PTPRA-204ENST00000380393 BPY2O14599 106 aa6.61□□□□□ -1.35
PTPRA-204ENST00000380393 ERC2-IT1O76042 136 aa6.61□□□□□ -1.35
PTPRA-204ENST00000380393 LINC00269Q8N2A0 174 aa6.61□□□□□ -1.35
PTPRA-204ENST00000380393 C11orf44Q8N8P7 122 aa6.6□□□□□ -1.35
PTPRA-204ENST00000380393 C1orf64Q8NEQ6 169 aa6.6□□□□□ -1.35
PTPRA-204ENST00000380393 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.59□□□□□ -1.35
PTPRA-204ENST00000380393 HIGD2AQ9BW72 106 aa6.59□□□□□ -1.35
PTPRA-204ENST00000380393 ACANP16112 2415 aa6.59□□□□□ -1.35
PTPRA-204ENST00000380393 IGLV5-39A0A0G2JS06 123 aa6.59□□□□□ -1.35
PTPRA-204ENST00000380393 CXCL6P80162 114 aa6.59□□□□□ -1.35
PTPRA-204ENST00000380393 COX6A2Q02221 97 aa6.59□□□□□ -1.35
PTPRA-204ENST00000380393 C16orf90A8MZG2 172 aa6.58□□□□□ -1.36
PTPRA-204ENST00000380393 UBE2AP49459 152 aa6.58□□□□□ -1.36
PTPRA-204ENST00000380393 PRR26Q8N8Z3 221 aa6.58□□□□□ -1.36
PTPRA-204ENST00000380393 UNC79Q9P2D8 2635 aa6.58□□□□□ -1.36
PTPRA-204ENST00000380393 SONP18583 2426 aaKnown RBP6.58□□□□□ -1.36
PTPRA-204ENST00000380393 CHKB-CPT1BH3BT56 60 aa6.57□□□□□ -1.36
PTPRA-204ENST00000380393 K7EQG2 157 aa6.57□□□□□ -1.36
PTPRA-204ENST00000380393 Q8N9W7 124 aa6.57□□□□□ -1.36
PTPRA-204ENST00000380393 IGLV5-45A0A087WSX0 123 aa6.57□□□□□ -1.36
PTPRA-204ENST00000380393 M0R2N4 97 aa6.57□□□□□ -1.36
PTPRA-204ENST00000380393 KRTAP10-9P60411 292 aa6.57□□□□□ -1.36
PTPRA-204ENST00000380393 PHF5AQ7RTV0 110 aaKnown RBP6.57□□□□□ -1.36
PTPRA-204ENST00000380393 TEX15Q9BXT5 2789 aa6.57□□□□□ -1.36
PTPRA-204ENST00000380393 PRB2P02812 416 aaPredicted RBP6.56□□□□□ -1.36
PTPRA-204ENST00000380393 SMIM1B2RUZ4 78 aa6.56□□□□□ -1.36
PTPRA-204ENST00000380393 Q6ZQT0 140 aa6.56□□□□□ -1.36
PTPRA-204ENST00000380393 HCG22E2RYF7 251 aa6.55□□□□□ -1.36
PTPRA-204ENST00000380393 LINC00158P58513 81 aa6.55□□□□□ -1.36
PTPRA-204ENST00000380393 Q5VV11 94 aa6.55□□□□□ -1.36
PTPRA-204ENST00000380393 C7orf65Q6ZTY9 151 aa6.55□□□□□ -1.36
PTPRA-204ENST00000380393 LCA10Q71F78 164 aa6.55□□□□□ -1.36
PTPRA-204ENST00000380393 NANOS2P60321 138 aaKnown RBP6.55□□□□□ -1.36
PTPRA-204ENST00000380393 ATP11AUNQ6ZP68 121 aa6.55□□□□□ -1.36
PTPRA-204ENST00000380393 FAM19A3Q7Z5A8 133 aa6.55□□□□□ -1.36
PTPRA-204ENST00000380393 LINC00467Q9BRT7 94 aa6.55□□□□□ -1.36
PTPRA-204ENST00000380393 Q8N814 137 aa6.54□□□□□ -1.36
PTPRA-204ENST00000380393 ITPR3Q14573 2671 aa6.54□□□□□ -1.36
PTPRA-204ENST00000380393 A6NN06 94 aa6.54□□□□□ -1.36
PTPRA-204ENST00000380393 CCL18P55774 89 aa6.54□□□□□ -1.36
PTPRA-204ENST00000380393 PLA2G2AP14555 144 aa6.53□□□□□ -1.36
PTPRA-204ENST00000380393 LY6EQ16553 131 aa6.53□□□□□ -1.36
PTPRA-204ENST00000380393 LINC00242Q5T6M2 205 aa6.53□□□□□ -1.36
PTPRA-204ENST00000380393 C11orf71Q6IPW1 123 aa6.53□□□□□ -1.36
PTPRA-204ENST00000380393 CD164L2Q6UWJ8 174 aa6.53□□□□□ -1.36
PTPRA-204ENST00000380393 MDFIQ99750 246 aa6.53□□□□□ -1.36
PTPRA-204ENST00000380393 CHCHD7Q9BUK0 85 aa6.53□□□□□ -1.36
PTPRA-204ENST00000380393 DIRC1Q969H9 104 aa6.53□□□□□ -1.36
PTPRA-204ENST00000380393 RHPN1-AS1Q9BWJ2 59 aa6.53□□□□□ -1.36
PTPRA-204ENST00000380393 ESM1Q9NQ30 184 aa6.53□□□□□ -1.36
PTPRA-204ENST00000380393 MYO9AB2RTY4 2548 aa6.53□□□□□ -1.36
PTPRA-204ENST00000380393 MAPK1IP1LQ8NDC0 245 aa6.52□□□□□ -1.36
PTPRA-204ENST00000380393 LINC00167Q96N53 147 aa6.52□□□□□ -1.36
PTPRA-204ENST00000380393 FLNAP21333 2647 aaKnown RBP6.52□□□□□ -1.37
PTPRA-204ENST00000380393 MXRA5Q9NR99 2828 aa6.52□□□□□ -1.37
PTPRA-204ENST00000380393 PSCAO43653 123 aa6.52□□□□□ -1.37
PTPRA-204ENST00000380393 PROK1P58294 105 aa6.52□□□□□ -1.37
PTPRA-204ENST00000380393 PRR4Q16378 134 aa6.52□□□□□ -1.37
PTPRA-204ENST00000380393 OCR1Q9BZK8 76 aa6.52□□□□□ -1.37
PTPRA-204ENST00000380393 SETXQ7Z333 2677 aaKnown RBP6.52□□□□□ -1.37
PTPRA-204ENST00000380393 IGHV3OR16-12A0A075B7B8 117 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms