RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 TEX49A0A1B0GTD5 131 aa14.86□□□□□ -0.03
SKI-201ENST00000378536 LINC01561Q8N1V8 128 aa14.85□□□□□ -0.03
SKI-201ENST00000378536 F8WDY8 70 aa14.84□□□□□ -0.03
SKI-201ENST00000378536 F8P00451 2351 aa14.84□□□□□ -0.03
SKI-201ENST00000378536 Q6ZQY7 126 aa14.84□□□□□ -0.03
SKI-201ENST00000378536 HECTD1Q9ULT8 2610 aa14.83□□□□□ -0.04
SKI-201ENST00000378536 NTM-AS1Q6ZSK4 140 aa14.83□□□□□ -0.04
SKI-201ENST00000378536 C6orf223Q8N319 242 aa14.83□□□□□ -0.04
SKI-201ENST00000378536 LST1O00453 97 aa14.82□□□□□ -0.04
SKI-201ENST00000378536 C2orf48Q96LS8 159 aa14.82□□□□□ -0.04
SKI-201ENST00000378536 ZNF706Q9Y5V0 76 aaPredicted RBP14.81□□□□□ -0.04
SKI-201ENST00000378536 H0Y9J4 135 aa14.81□□□□□ -0.04
SKI-201ENST00000378536 M0QXV9 152 aa14.81□□□□□ -0.04
SKI-201ENST00000378536 PLAC8L1A1L4L8 177 aa14.8□□□□□ -0.04
SKI-201ENST00000378536 H3BNG1 76 aa14.8□□□□□ -0.04
SKI-201ENST00000378536 C1orf134Q5TEV5 83 aa14.8□□□□□ -0.04
SKI-201ENST00000378536 ADAMTSL4-AS1Q5T5F5 129 aa14.79□□□□□ -0.04
SKI-201ENST00000378536 IGLV5-52A0A0A0MRZ9 124 aa14.79□□□□□ -0.04
SKI-201ENST00000378536 ESRGQ1W209 222 aa14.79□□□□□ -0.04
SKI-201ENST00000378536 NDUFC2-KCTD14E9PQ53 114 aa14.79□□□□□ -0.04
SKI-201ENST00000378536 Q8NAQ8 132 aa14.79□□□□□ -0.04
SKI-201ENST00000378536 BPY2O14599 106 aa14.78□□□□□ -0.04
SKI-201ENST00000378536 LINC00643Q86TS7 51 aa14.78□□□□□ -0.04
SKI-201ENST00000378536 PPDPFQ9H3Y8 114 aa14.78□□□□□ -0.04
SKI-201ENST00000378536 LINC01556Q5JQF7 62 aa14.77□□□□□ -0.04
SKI-201ENST00000378536 A0A1B0GX51 115 aa14.77□□□□□ -0.05
SKI-201ENST00000378536 TRBV10-3A0A0K0K1G6 114 aa14.76□□□□□ -0.05
SKI-201ENST00000378536 FAM236AA0A1B0GUQ0 79 aa14.75□□□□□ -0.05
SKI-201ENST00000378536 FAM236BA0A1B0GV22 79 aa14.75□□□□□ -0.05
SKI-201ENST00000378536 FLNBO75369 2602 aaKnown RBP14.75□□□□□ -0.05
SKI-201ENST00000378536 ATOX1O00244 68 aa14.75□□□□□ -0.05
SKI-201ENST00000378536 KRTAP1-1Q07627 177 aa14.74□□□□□ -0.05
SKI-201ENST00000378536 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.74□□□□□ -0.05
SKI-201ENST00000378536 MDFIQ99750 246 aa14.74□□□□□ -0.05
SKI-201ENST00000378536 CCKP06307 115 aa14.73□□□□□ -0.05
SKI-201ENST00000378536 PRR3P79522 188 aaKnown RBP14.73□□□□□ -0.05
SKI-201ENST00000378536 KRTAP10-3P60369 221 aa14.73□□□□□ -0.05
SKI-201ENST00000378536 MP68P56378 58 aa14.73□□□□□ -0.05
SKI-201ENST00000378536 Q9UF83 564 aa14.73□□□□□ -0.05
SKI-201ENST00000378536 ZNF292O60281 2723 aa14.72□□□□□ -0.05
SKI-201ENST00000378536 Q6ZRU5 148 aa14.71□□□□□ -0.06
SKI-201ENST00000378536 RPL28P46779 137 aaKnown RBP14.7□□□□□ -0.06
SKI-201ENST00000378536 IGHV3OR16-9A0A0B4J2B5 98 aa14.7□□□□□ -0.06
SKI-201ENST00000378536 REG3GQ6UW15 175 aa14.7□□□□□ -0.06
SKI-201ENST00000378536 NDUFC2O95298 119 aa14.69□□□□□ -0.06
SKI-201ENST00000378536 IGLV5-39A0A0G2JS06 123 aa14.69□□□□□ -0.06
SKI-201ENST00000378536 A8MTW9 85 aa14.69□□□□□ -0.06
SKI-201ENST00000378536 UPK3BQ9BT76 320 aa14.68□□□□□ -0.06
SKI-201ENST00000378536 PRUNE2Q8WUY3 3088 aa14.66□□□□□ -0.06
SKI-201ENST00000378536 TMEM258P61165 79 aa14.66□□□□□ -0.06
SKI-201ENST00000378536 CSNK1G2-AS1Q8NCQ2 148 aa14.66□□□□□ -0.06
SKI-201ENST00000378536 SMIM20Q8N5G0 67 aa14.66□□□□□ -0.06
SKI-201ENST00000378536 C3orf84H3BNL1 204 aa14.64□□□□□ -0.07
SKI-201ENST00000378536 KRTAP10-11P60412 298 aa14.64□□□□□ -0.07
SKI-201ENST00000378536 ATP5EP2Q5VTU8 51 aa14.64□□□□□ -0.07
SKI-201ENST00000378536 Q8N814 137 aa14.64□□□□□ -0.07
SKI-201ENST00000378536 MRPL55Q7Z7F7 128 aaKnown RBP14.63□□□□□ -0.07
SKI-201ENST00000378536 NDUFV3P56181 108 aaKnown RBP14.63□□□□□ -0.07
SKI-201ENST00000378536 IGLV9-49A0A0B4J1Y8 123 aa14.62□□□□□ -0.07
SKI-201ENST00000378536 SCXQ7RTU7 201 aa14.62□□□□□ -0.07
SKI-201ENST00000378536 B5MCH6 92 aa14.62□□□□□ -0.07
SKI-201ENST00000378536 SDIM1Q6ZPB5 146 aa14.62□□□□□ -0.07
SKI-201ENST00000378536 IGLV5-45A0A087WSX0 123 aa14.6□□□□□ -0.07
SKI-201ENST00000378536 SS18L2Q9UHA2 77 aa14.6□□□□□ -0.07
SKI-201ENST00000378536 A0A087WYN8 130 aa14.58□□□□□ -0.08
SKI-201ENST00000378536 C19orf73Q9NVV2 129 aa14.58□□□□□ -0.08
SKI-201ENST00000378536 PRYO14603 147 aa14.58□□□□□ -0.08
SKI-201ENST00000378536 HRCT1Q6UXD1 115 aa14.58□□□□□ -0.08
SKI-201ENST00000378536 ENHOQ6UWT2 76 aa14.57□□□□□ -0.08
SKI-201ENST00000378536 C10orf25Q5T742 122 aa14.56□□□□□ -0.08
SKI-201ENST00000378536 K7EIL1 84 aa14.56□□□□□ -0.08
SKI-201ENST00000378536 Q8N3U1 123 aa14.56□□□□□ -0.08
SKI-201ENST00000378536 CDH23Q9H251 3354 aa14.55□□□□□ -0.08
SKI-201ENST00000378536 LINC00588Q9Y4M8 146 aa14.55□□□□□ -0.08
SKI-201ENST00000378536 UNC80Q8N2C7 3258 aa14.55□□□□□ -0.08
SKI-201ENST00000378536 MT-ATP8P03928 68 aa14.55□□□□□ -0.08
SKI-201ENST00000378536 MUC4Q99102 2169 aa14.54□□□□□ -0.08
SKI-201ENST00000378536 C1orf137Q5JT78 98 aa14.53□□□□□ -0.08
SKI-201ENST00000378536 LINC00337Q8N6G1 96 aa14.52□□□□□ -0.08
SKI-201ENST00000378536 GIG44P09565 113 aaPredicted RBP14.52□□□□□ -0.09
SKI-201ENST00000378536 SPINK6Q6UWN8 80 aa14.52□□□□□ -0.09
SKI-201ENST00000378536 C6orf48Q9UBA6 75 aa14.51□□□□□ -0.09
SKI-201ENST00000378536 HELZ2Q9BYK8 2649 aaKnown RBP14.51□□□□□ -0.09
SKI-201ENST00000378536 C22orf24Q9Y442 160 aa14.5□□□□□ -0.09
SKI-201ENST00000378536 LAMA2P24043 3122 aaKnown RBP14.5□□□□□ -0.09
SKI-201ENST00000378536 NBDYA0A0U1RRE5 68 aa14.49□□□□□ -0.09
SKI-201ENST00000378536 FLNAP21333 2647 aaKnown RBP14.48□□□□□ -0.09
SKI-201ENST00000378536 IGKV4-1P06312 121 aa14.48□□□□□ -0.09
SKI-201ENST00000378536 C5orf47Q569G3 176 aa14.47□□□□□ -0.09
SKI-201ENST00000378536 CHKB-CPT1BH3BT56 60 aa14.46□□□□□ -0.1
SKI-201ENST00000378536 LINC00575Q6W349 94 aa14.46□□□□□ -0.1
SKI-201ENST00000378536 WWC2-AS2Q96NR7 200 aa14.45□□□□□ -0.1
SKI-201ENST00000378536 MGAQ8IWI9 3026 aa14.45□□□□□ -0.1
SKI-201ENST00000378536 DNAH10OSP0CZ25 163 aa14.43□□□□□ -0.1
SKI-201ENST00000378536 SPATA3Q8NHX4 192 aa14.43□□□□□ -0.1
SKI-201ENST00000378536 ITPR3Q14573 2671 aa14.43□□□□□ -0.1
SKI-201ENST00000378536 Q9BRP9 147 aa14.42□□□□□ -0.1
SKI-201ENST00000378536 PRLHP81277 87 aa14.4□□□□□ -0.1
SKI-201ENST00000378536 Q6JHZ5 121 aa14.4□□□□□ -0.1
SKI-201ENST00000378536 J3KT08 172 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms