RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 MUC7Q8TAX7 377 aa6.15□□□□□ -1.43
VPS36-201ENST00000378060 A8MZ25 164 aa6.14□□□□□ -1.43
VPS36-201ENST00000378060 F8W735 103 aaPredicted RBP6.14□□□□□ -1.43
VPS36-201ENST00000378060 NDUFS5O43920 106 aa6.14□□□□□ -1.43
VPS36-201ENST00000378060 C6orf99Q4VX62 202 aa6.14□□□□□ -1.43
VPS36-201ENST00000378060 C10orf99Q6UWK7 81 aa6.14□□□□□ -1.43
VPS36-201ENST00000378060 NDUFA7O95182 113 aa6.14□□□□□ -1.43
VPS36-201ENST00000378060 POM121L12Q8N7R1 296 aa6.14□□□□□ -1.43
VPS36-201ENST00000378060 IGLV2-18A0A075B6J9 118 aa6.13□□□□□ -1.43
VPS36-201ENST00000378060 FAM236DA0A1B0GTK5 79 aa6.13□□□□□ -1.43
VPS36-201ENST00000378060 SLPIP03973 132 aa6.13□□□□□ -1.43
VPS36-201ENST00000378060 FAM236CP0DP71 79 aa6.13□□□□□ -1.43
VPS36-201ENST00000378060 CD164L2Q6UWJ8 174 aa6.13□□□□□ -1.43
VPS36-201ENST00000378060 ZNF702PQ9H963 129 aa6.13□□□□□ -1.43
VPS36-201ENST00000378060 MXRA5Q9NR99 2828 aa6.13□□□□□ -1.43
VPS36-201ENST00000378060 IGLV4-69A0A075B6H9 119 aa6.13□□□□□ -1.43
VPS36-201ENST00000378060 USP17L23D6RBM5 183 aa6.13□□□□□ -1.43
VPS36-201ENST00000378060 COX7CP15954 63 aa6.13□□□□□ -1.43
VPS36-201ENST00000378060 AGRNO00468 2067 aa6.13□□□□□ -1.43
VPS36-201ENST00000378060 ENHOQ6UWT2 76 aa6.13□□□□□ -1.43
VPS36-201ENST00000378060 FAM110AQ9BQ89 295 aa6.13□□□□□ -1.43
VPS36-201ENST00000378060 NDUFC1O43677 76 aa6.12□□□□□ -1.43
VPS36-201ENST00000378060 MIFP14174 115 aa6.12□□□□□ -1.43
VPS36-201ENST00000378060 CDC42SE2Q9NRR3 84 aa6.12□□□□□ -1.43
VPS36-201ENST00000378060 ZNF580Q9UK33 172 aa6.12□□□□□ -1.43
VPS36-201ENST00000378060 FN1P02751 2386 aaKnown RBP6.11□□□□□ -1.43
VPS36-201ENST00000378060 UBE2AP49459 152 aa6.11□□□□□ -1.43
VPS36-201ENST00000378060 LINC00242Q5T6M2 205 aa6.11□□□□□ -1.43
VPS36-201ENST00000378060 SMIM11BQ8TCY0 68 aa6.11□□□□□ -1.43
VPS36-201ENST00000378060 ACANP16112 2415 aa6.11□□□□□ -1.43
VPS36-201ENST00000378060 LINC00959A0A1B0GUT2 108 aa6.11□□□□□ -1.43
VPS36-201ENST00000378060 COX17Q14061 63 aa6.11□□□□□ -1.43
VPS36-201ENST00000378060 PRRC2AP48634 2157 aaKnown RBP6.11□□□□□ -1.43
VPS36-201ENST00000378060 C5orf47Q569G3 176 aa6.11□□□□□ -1.43
VPS36-201ENST00000378060 Q6JHZ5 121 aa6.11□□□□□ -1.43
VPS36-201ENST00000378060 ATP5EP56381 51 aaPredicted RBP6.1□□□□□ -1.43
VPS36-201ENST00000378060 AMELXQ99217 191 aa6.1□□□□□ -1.43
VPS36-201ENST00000378060 M0QXV9 152 aa6.1□□□□□ -1.43
VPS36-201ENST00000378060 Q8IZM0 81 aa6.1□□□□□ -1.43
VPS36-201ENST00000378060 TET2Q6N021 2002 aaPredicted RBP6.1□□□□□ -1.43
VPS36-201ENST00000378060 CSDC2Q9Y534 153 aaKnown RBP6.1□□□□□ -1.43
VPS36-201ENST00000378060 C14orf177Q52M58 125 aa6.09□□□□□ -1.43
VPS36-201ENST00000378060 CCDC179H3BU77 68 aa6.09□□□□□ -1.43
VPS36-201ENST00000378060 RPL28P46779 137 aaKnown RBP6.09□□□□□ -1.43
VPS36-201ENST00000378060 Q6ZQY7 126 aa6.09□□□□□ -1.43
VPS36-201ENST00000378060 TSPEAR-AS2P59090 65 aa6.09□□□□□ -1.43
VPS36-201ENST00000378060 SMIM1B2RUZ4 78 aa6.09□□□□□ -1.44
VPS36-201ENST00000378060 XAGE1AQ9HD64 81 aa6.09□□□□□ -1.44
VPS36-201ENST00000378060 CYSRT1A8MQ03 144 aa6.08□□□□□ -1.44
VPS36-201ENST00000378060 CCKP06307 115 aa6.08□□□□□ -1.44
VPS36-201ENST00000378060 C11orf45Q8TAV5 145 aa6.08□□□□□ -1.44
VPS36-201ENST00000378060 LINC01546A6NGU7 62 aa6.08□□□□□ -1.44
VPS36-201ENST00000378060 SYCNQ0VAF6 134 aa6.08□□□□□ -1.44
VPS36-201ENST00000378060 LELP1Q5T871 98 aa6.07□□□□□ -1.44
VPS36-201ENST00000378060 KIR2DL5BQ8NHK3 375 aa6.07□□□□□ -1.44
VPS36-201ENST00000378060 M0R378 163 aa6.07□□□□□ -1.44
VPS36-201ENST00000378060 WFDC11Q8NEX6 87 aa6.07□□□□□ -1.44
VPS36-201ENST00000378060 CHCHD7Q9BUK0 85 aa6.07□□□□□ -1.44
VPS36-201ENST00000378060 NDUFC2-KCTD14E9PQ53 114 aa6.07□□□□□ -1.44
VPS36-201ENST00000378060 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.07□□□□□ -1.44
VPS36-201ENST00000378060 LINC01006Q8NI28 216 aa6.07□□□□□ -1.44
VPS36-201ENST00000378060 CLUHP3Q96NS8 147 aa6.07□□□□□ -1.44
VPS36-201ENST00000378060 HIVEP1P15822 2718 aa6.07□□□□□ -1.44
VPS36-201ENST00000378060 BRK1Q8WUW1 75 aa6.07□□□□□ -1.44
VPS36-201ENST00000378060 B9D2Q9BPU9 175 aa6.07□□□□□ -1.44
VPS36-201ENST00000378060 CHKB-CPT1BH3BT56 60 aa6.06□□□□□ -1.44
VPS36-201ENST00000378060 MTORP42345 2549 aa6.06□□□□□ -1.44
VPS36-201ENST00000378060 NF1P21359 2839 aa6.06□□□□□ -1.44
VPS36-201ENST00000378060 NIPBLQ6KC79 2804 aaeCLIP6.06□□□□□ -1.44
VPS36-201ENST00000378060 MAST4O15021 2626 aa6.06□□□□□ -1.44
VPS36-201ENST00000378060 A0A087WZ39 114 aa6.06□□□□□ -1.44
VPS36-201ENST00000378060 ODF3L2Q3SX64 289 aa6.06□□□□□ -1.44
VPS36-201ENST00000378060 BEAN1Q3B7T3 259 aa6.06□□□□□ -1.44
VPS36-201ENST00000378060 FAM19A3Q7Z5A8 133 aa6.06□□□□□ -1.44
VPS36-201ENST00000378060 HIGD2AQ9BW72 106 aa6.06□□□□□ -1.44
VPS36-201ENST00000378060 LOC100131303A0A0U1RQF7 123 aa6.05□□□□□ -1.44
VPS36-201ENST00000378060 PRM2P04554 102 aa6.05□□□□□ -1.44
VPS36-201ENST00000378060 SCXQ7RTU7 201 aa6.05□□□□□ -1.44
VPS36-201ENST00000378060 ANK3Q12955 4377 aaKnown RBP6.05□□□□□ -1.44
VPS36-201ENST00000378060 DEFB131BA0A096LNP1 70 aa6.05□□□□□ -1.44
VPS36-201ENST00000378060 H0Y9J4 135 aa6.05□□□□□ -1.44
VPS36-201ENST00000378060 AVPP01185 164 aa6.05□□□□□ -1.44
VPS36-201ENST00000378060 DHRS4-AS1Q9P1J3 65 aa6.05□□□□□ -1.44
VPS36-201ENST00000378060 NTM-AS1Q6ZSK4 140 aa6.05□□□□□ -1.44
VPS36-201ENST00000378060 CR1P17927 2039 aa6.05□□□□□ -1.44
VPS36-201ENST00000378060 ADAMTSL4-AS1Q5T5F5 129 aa6.05□□□□□ -1.44
VPS36-201ENST00000378060 LINC00526Q96FQ7 95 aa6.05□□□□□ -1.44
VPS36-201ENST00000378060 KIF25-AS1Q9Y6Z4 181 aa6.05□□□□□ -1.44
VPS36-201ENST00000378060 KRTAP1-3Q8IUG1 177 aa6.04□□□□□ -1.44
VPS36-201ENST00000378060 TEP1Q99973 2627 aaKnown RBP6.04□□□□□ -1.44
VPS36-201ENST00000378060 C18orf65Q6ZTR6 163 aa6.04□□□□□ -1.44
VPS36-201ENST00000378060 KLK5Q9Y337 293 aaPredicted RBP6.04□□□□□ -1.44
VPS36-201ENST00000378060 ZNF73O43830 326 aaPredicted RBP6.03□□□□□ -1.44
VPS36-201ENST00000378060 PRB2P02812 416 aaPredicted RBP6.03□□□□□ -1.44
VPS36-201ENST00000378060 HILS1P60008 231 aa6.03□□□□□ -1.44
VPS36-201ENST00000378060 LINC00482Q8N8I6 264 aa6.03□□□□□ -1.44
VPS36-201ENST00000378060 IGKV2-24A0A0C4DH68 120 aa6.03□□□□□ -1.44
VPS36-201ENST00000378060 C1orf158Q8N1D5 194 aa6.03□□□□□ -1.44
VPS36-201ENST00000378060 V9GYY9 64 aa6.03□□□□□ -1.44
VPS36-201ENST00000378060 TRAV7A0A075B6U4 112 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms