RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 OTOGLQ3ZCN5 2332 aa6.08□□□□□ -1.44
PCDH9-202ENST00000377865 MED13LQ71F56 2210 aa6.08□□□□□ -1.44
PCDH9-202ENST00000377865 IL17DQ8TAD2 202 aa6.08□□□□□ -1.44
PCDH9-202ENST00000377865 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.08□□□□□ -1.44
PCDH9-202ENST00000377865 TRAV10A0A0B4J240 114 aa6.08□□□□□ -1.44
PCDH9-202ENST00000377865 ELOF1P60002 83 aaKnown RBP6.07□□□□□ -1.44
PCDH9-202ENST00000377865 ESRGQ1W209 222 aa6.07□□□□□ -1.44
PCDH9-202ENST00000377865 SPTAN1Q13813 2472 aaKnown RBP6.07□□□□□ -1.44
PCDH9-202ENST00000377865 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.06□□□□□ -1.44
PCDH9-202ENST00000377865 C4orf26Q17RF5 130 aa6.06□□□□□ -1.44
PCDH9-202ENST00000377865 WFDC13Q8IUB5 93 aa6.06□□□□□ -1.44
PCDH9-202ENST00000377865 CELA1Q9UNI1 258 aa6.06□□□□□ -1.44
PCDH9-202ENST00000377865 RIF1Q5UIP0 2472 aaKnown RBP6.06□□□□□ -1.44
PCDH9-202ENST00000377865 RPL37AP8A6NKH3 93 aa6.06□□□□□ -1.44
PCDH9-202ENST00000377865 IGKV2-24A0A0C4DH68 120 aa6.05□□□□□ -1.44
PCDH9-202ENST00000377865 ERC2-IT1O76042 136 aa6.05□□□□□ -1.44
PCDH9-202ENST00000377865 FSHBP01225 129 aa6.05□□□□□ -1.44
PCDH9-202ENST00000377865 SPTSSBQ8NFR3 76 aa6.05□□□□□ -1.44
PCDH9-202ENST00000377865 LYPD5Q6UWN5 251 aa6.05□□□□□ -1.44
PCDH9-202ENST00000377865 REG3GQ6UW15 175 aa6.05□□□□□ -1.44
PCDH9-202ENST00000377865 IGKV4-1P06312 121 aa6.04□□□□□ -1.44
PCDH9-202ENST00000377865 IGHV4-30-4P0DP06 118 aa6.04□□□□□ -1.44
PCDH9-202ENST00000377865 GVQW2A0A096LPI5 108 aaPredicted RBP6.04□□□□□ -1.44
PCDH9-202ENST00000377865 LINC00167Q96N53 147 aa6.04□□□□□ -1.44
PCDH9-202ENST00000377865 HCG22E2RYF7 251 aa6.03□□□□□ -1.44
PCDH9-202ENST00000377865 C10orf25Q5T742 122 aa6.03□□□□□ -1.44
PCDH9-202ENST00000377865 A0A0J9YWU9 116 aa6.03□□□□□ -1.44
PCDH9-202ENST00000377865 PLA2G2AP14555 144 aa6.03□□□□□ -1.44
PCDH9-202ENST00000377865 ZNF706Q9Y5V0 76 aaPredicted RBP6.03□□□□□ -1.44
PCDH9-202ENST00000377865 Q6ZRU5 148 aa6.02□□□□□ -1.45
PCDH9-202ENST00000377865 PRR15LQ9BU68 103 aa6.02□□□□□ -1.45
PCDH9-202ENST00000377865 hDV103S1A0JD37 113 aa6.02□□□□□ -1.45
PCDH9-202ENST00000377865 IGLV6-57P01721 117 aa6.02□□□□□ -1.45
PCDH9-202ENST00000377865 KRTAP10-9P60411 292 aa6.02□□□□□ -1.45
PCDH9-202ENST00000377865 C6orf48Q9UBA6 75 aa6.02□□□□□ -1.45
PCDH9-202ENST00000377865 SPTBN2O15020 2390 aa6.01□□□□□ -1.45
PCDH9-202ENST00000377865 OBSCN-AS1Q96MR7 158 aa6.01□□□□□ -1.45
PCDH9-202ENST00000377865 A6NED7 52 aa6.01□□□□□ -1.45
PCDH9-202ENST00000377865 INAFM1C9JVW0 142 aa6□□□□□ -1.45
PCDH9-202ENST00000377865 MUC4Q99102 2169 aa6□□□□□ -1.45
PCDH9-202ENST00000377865 PRR4Q16378 134 aa6□□□□□ -1.45
PCDH9-202ENST00000377865 SMIM29Q86T20 159 aa6□□□□□ -1.45
PCDH9-202ENST00000377865 CUL9Q8IWT3 2517 aa6□□□□□ -1.45
PCDH9-202ENST00000377865 X6R8D5 127 aa6□□□□□ -1.45
PCDH9-202ENST00000377865 LINC00208Q96KT6 92 aa6□□□□□ -1.45
PCDH9-202ENST00000377865 PTPRQQ9UMZ3 2332 aa6□□□□□ -1.45
PCDH9-202ENST00000377865 LINC00474Q9P2X8 69 aa6□□□□□ -1.45
PCDH9-202ENST00000377865 H3BNG1 76 aa5.99□□□□□ -1.45
PCDH9-202ENST00000377865 ZFHX2Q9C0A1 2572 aaPredicted RBP5.99□□□□□ -1.45
PCDH9-202ENST00000377865 KLKP1Q107X0 134 aa5.99□□□□□ -1.45
PCDH9-202ENST00000377865 CASC2Q6XLA1 102 aa5.99□□□□□ -1.45
PCDH9-202ENST00000377865 KIAA0087Q14695 138 aa5.99□□□□□ -1.45
PCDH9-202ENST00000377865 PLAC8L1A1L4L8 177 aa5.98□□□□□ -1.45
PCDH9-202ENST00000377865 CREBBPQ92793 2442 aa5.98□□□□□ -1.45
PCDH9-202ENST00000377865 H0Y9P7 68 aa5.98□□□□□ -1.45
PCDH9-202ENST00000377865 NANOS2P60321 138 aaKnown RBP5.98□□□□□ -1.45
PCDH9-202ENST00000377865 TM2D3Q9BRN9 247 aa5.98□□□□□ -1.45
PCDH9-202ENST00000377865 Q8N9L7 120 aa5.98□□□□□ -1.45
PCDH9-202ENST00000377865 NBASA2RRP1 2371 aa5.97□□□□□ -1.45
PCDH9-202ENST00000377865 H3BPC8 53 aa5.97□□□□□ -1.45
PCDH9-202ENST00000377865 CSNK1G2-AS1Q8NCQ2 148 aa5.97□□□□□ -1.45
PCDH9-202ENST00000377865 C7orf33Q8WU49 177 aa5.97□□□□□ -1.45
PCDH9-202ENST00000377865 LRCOL1A6NCL2 159 aa5.96□□□□□ -1.45
PCDH9-202ENST00000377865 Q9BRP9 147 aa5.96□□□□□ -1.46
PCDH9-202ENST00000377865 LIMD2Q9BT23 127 aa5.96□□□□□ -1.46
PCDH9-202ENST00000377865 LINC01556Q5JQF7 62 aa5.96□□□□□ -1.46
PCDH9-202ENST00000377865 Q6ZTC4 211 aa5.96□□□□□ -1.46
PCDH9-202ENST00000377865 FAM104AQ969W3 186 aa5.96□□□□□ -1.46
PCDH9-202ENST00000377865 SEC61GP60059 68 aa5.95□□□□□ -1.46
PCDH9-202ENST00000377865 A0A096LNI7 61 aa5.95□□□□□ -1.46
PCDH9-202ENST00000377865 PMAIP1Q13794 54 aa5.95□□□□□ -1.46
PCDH9-202ENST00000377865 PSPHP1O15172 72 aa5.95□□□□□ -1.46
PCDH9-202ENST00000377865 Q8NBF4 154 aa5.95□□□□□ -1.46
PCDH9-202ENST00000377865 DOPEY2Q9Y3R5 2298 aa5.94□□□□□ -1.46
PCDH9-202ENST00000377865 C22orf24Q9Y442 160 aa5.94□□□□□ -1.46
PCDH9-202ENST00000377865 A0A087WSZ3 146 aa5.94□□□□□ -1.46
PCDH9-202ENST00000377865 Q6ZRX8 168 aa5.94□□□□□ -1.46
PCDH9-202ENST00000377865 VPREB1P12018 145 aa5.94□□□□□ -1.46
PCDH9-202ENST00000377865 LINC00612Q8N6U2 182 aa5.94□□□□□ -1.46
PCDH9-202ENST00000377865 RETNQ9HD89 108 aa5.93□□□□□ -1.46
PCDH9-202ENST00000377865 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.93□□□□□ -1.46
PCDH9-202ENST00000377865 H7BZZ5 65 aa5.93□□□□□ -1.46
PCDH9-202ENST00000377865 TRBV7-4A0A0J9YYF1 115 aa5.92□□□□□ -1.46
PCDH9-202ENST00000377865 C9orf129Q5T035 196 aaKnown RBP5.92□□□□□ -1.46
PCDH9-202ENST00000377865 A0A096LNT2 108 aa5.91□□□□□ -1.46
PCDH9-202ENST00000377865 WIPF1O43516 503 aa5.91□□□□□ -1.46
PCDH9-202ENST00000377865 WDR87Q6ZQQ6 2873 aa5.91□□□□□ -1.46
PCDH9-202ENST00000377865 Q8NAQ8 132 aa5.9□□□□□ -1.46
PCDH9-202ENST00000377865 LINC00528Q8N1L1 170 aa5.9□□□□□ -1.46
PCDH9-202ENST00000377865 GIG44P09565 113 aaPredicted RBP5.9□□□□□ -1.47
PCDH9-202ENST00000377865 C4orf48Q5BLP8 95 aa5.9□□□□□ -1.47
PCDH9-202ENST00000377865 C1orf64Q8NEQ6 169 aa5.9□□□□□ -1.47
PCDH9-202ENST00000377865 IGLV9-49A0A0B4J1Y8 123 aa5.9□□□□□ -1.47
PCDH9-202ENST00000377865 TP53AIP1Q9HCN2 124 aa5.9□□□□□ -1.47
PCDH9-202ENST00000377865 PRR34Q9NV39 138 aa5.89□□□□□ -1.47
PCDH9-202ENST00000377865 SORL1Q92673 2214 aa5.89□□□□□ -1.47
PCDH9-202ENST00000377865 NOTCH3Q9UM47 2321 aa5.89□□□□□ -1.47
PCDH9-202ENST00000377865 KCNQ1DNQ9H478 68 aa5.89□□□□□ -1.47
PCDH9-202ENST00000377865 OXLD1Q5BKU9 147 aa5.88□□□□□ -1.47
PCDH9-202ENST00000377865 LINC00476Q8WZB0 136 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms