RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 J3QKU1 62 aa11.31□□□□□ -0.6
TRIM27-202ENST00000377199 TRAV13-2A0A0B4J235 113 aa11.31□□□□□ -0.6
TRIM27-202ENST00000377199 SMIM11BQ8TCY0 68 aa11.3□□□□□ -0.6
TRIM27-202ENST00000377199 A0A087WZ39 114 aa11.3□□□□□ -0.6
TRIM27-202ENST00000377199 A0A087WYN8 130 aa11.29□□□□□ -0.6
TRIM27-202ENST00000377199 X6R8D5 127 aa11.29□□□□□ -0.6
TRIM27-202ENST00000377199 NDUFV3P56181 108 aaKnown RBP11.28□□□□□ -0.6
TRIM27-202ENST00000377199 PRR3P79522 188 aaKnown RBP11.28□□□□□ -0.6
TRIM27-202ENST00000377199 LINC00269Q8N2A0 174 aa11.28□□□□□ -0.6
TRIM27-202ENST00000377199 DNAL4O96015 105 aa11.28□□□□□ -0.6
TRIM27-202ENST00000377199 LY6G6DO95868 133 aa11.27□□□□□ -0.61
TRIM27-202ENST00000377199 SS18Q15532 418 aa11.27□□□□□ -0.61
TRIM27-202ENST00000377199 PRO0255Q9UI72 69 aa11.27□□□□□ -0.61
TRIM27-202ENST00000377199 INAFM1C9JVW0 142 aa11.27□□□□□ -0.61
TRIM27-202ENST00000377199 SLPIP03973 132 aa11.27□□□□□ -0.61
TRIM27-202ENST00000377199 LINC01600Q96MT4 127 aa11.27□□□□□ -0.61
TRIM27-202ENST00000377199 ANGP03950 147 aaKnown RBP11.26□□□□□ -0.61
TRIM27-202ENST00000377199 GAGE2AQ6NT46 116 aa11.26□□□□□ -0.61
TRIM27-202ENST00000377199 NHLRC4P0CG21 123 aaPredicted RBP11.26□□□□□ -0.61
TRIM27-202ENST00000377199 KIR2DL5BQ8NHK3 375 aa11.25□□□□□ -0.61
TRIM27-202ENST00000377199 NSD1Q96L73 2696 aaPredicted RBP11.25□□□□□ -0.61
TRIM27-202ENST00000377199 B5MCH6 92 aa11.25□□□□□ -0.61
TRIM27-202ENST00000377199 TRACP01848 142 aa11.25□□□□□ -0.61
TRIM27-202ENST00000377199 IBA57-AS1B1ANH7 110 aa11.25□□□□□ -0.61
TRIM27-202ENST00000377199 LECT2O14960 151 aa11.25□□□□□ -0.61
TRIM27-202ENST00000377199 RPL28P46779 137 aaKnown RBP11.25□□□□□ -0.61
TRIM27-202ENST00000377199 C9orf116Q5BN46 136 aaPredicted RBP11.25□□□□□ -0.61
TRIM27-202ENST00000377199 C9orf129Q5T035 196 aaKnown RBP11.24□□□□□ -0.61
TRIM27-202ENST00000377199 LINC00526Q96FQ7 95 aa11.24□□□□□ -0.61
TRIM27-202ENST00000377199 SMCR5Q8TEV8 140 aa11.23□□□□□ -0.61
TRIM27-202ENST00000377199 CCDC179H3BU77 68 aa11.22□□□□□ -0.61
TRIM27-202ENST00000377199 MALP21145 153 aa11.22□□□□□ -0.61
TRIM27-202ENST00000377199 C22orf24Q9Y442 160 aa11.22□□□□□ -0.61
TRIM27-202ENST00000377199 TEP1Q99973 2627 aaKnown RBP11.22□□□□□ -0.61
TRIM27-202ENST00000377199 DAD1P61803 113 aa11.22□□□□□ -0.61
TRIM27-202ENST00000377199 SS18L2Q9UHA2 77 aa11.22□□□□□ -0.61
TRIM27-202ENST00000377199 CELA1Q9UNI1 258 aa11.22□□□□□ -0.61
TRIM27-202ENST00000377199 IGHV4-28A0A0C4DH34 117 aa11.21□□□□□ -0.61
TRIM27-202ENST00000377199 DEFB121Q5J5C9 76 aa11.21□□□□□ -0.61
TRIM27-202ENST00000377199 C14orf132Q9NPU4 83 aa11.21□□□□□ -0.61
TRIM27-202ENST00000377199 FAM240AA0A1B0GVK7 77 aa11.2□□□□□ -0.62
TRIM27-202ENST00000377199 CHCHD10Q8WYQ3 142 aaPredicted RBP11.19□□□□□ -0.62
TRIM27-202ENST00000377199 HIVEP1P15822 2718 aa11.19□□□□□ -0.62
TRIM27-202ENST00000377199 CFAP161Q6P656 301 aa11.19□□□□□ -0.62
TRIM27-202ENST00000377199 C3orf56Q8N813 242 aa11.19□□□□□ -0.62
TRIM27-202ENST00000377199 REG3AQ06141 175 aa11.18□□□□□ -0.62
TRIM27-202ENST00000377199 LINC00612Q8N6U2 182 aa11.18□□□□□ -0.62
TRIM27-202ENST00000377199 NCR3O14931 201 aa11.18□□□□□ -0.62
TRIM27-202ENST00000377199 FAM236AA0A1B0GUQ0 79 aa11.17□□□□□ -0.62
TRIM27-202ENST00000377199 A0A1B0GUV1 79 aa11.17□□□□□ -0.62
TRIM27-202ENST00000377199 FAM236BA0A1B0GV22 79 aa11.17□□□□□ -0.62
TRIM27-202ENST00000377199 C9orf66Q5T8R8 295 aa11.17□□□□□ -0.62
TRIM27-202ENST00000377199 Q8IZM0 81 aa11.16□□□□□ -0.62
TRIM27-202ENST00000377199 C6orf223Q8N319 242 aa11.16□□□□□ -0.62
TRIM27-202ENST00000377199 SMIM9A6NGZ8 99 aa11.15□□□□□ -0.62
TRIM27-202ENST00000377199 Q6Q795 121 aa11.14□□□□□ -0.63
TRIM27-202ENST00000377199 PKD1L1Q8TDX9 2849 aa11.14□□□□□ -0.63
TRIM27-202ENST00000377199 KMT2BQ9UMN6 2715 aaPredicted RBP11.14□□□□□ -0.63
TRIM27-202ENST00000377199 LYRM9A8MSI8 78 aa11.14□□□□□ -0.63
TRIM27-202ENST00000377199 INAFM2P0DMQ5 153 aa11.13□□□□□ -0.63
TRIM27-202ENST00000377199 H0YGX0 51 aa11.13□□□□□ -0.63
TRIM27-202ENST00000377199 ACYP1P07311 99 aa11.13□□□□□ -0.63
TRIM27-202ENST00000377199 CD164L2Q6UWJ8 174 aa11.13□□□□□ -0.63
TRIM27-202ENST00000377199 KLK12Q9UKR0 248 aa11.13□□□□□ -0.63
TRIM27-202ENST00000377199 APOC4P55056 127 aa11.13□□□□□ -0.63
TRIM27-202ENST00000377199 MRPL23Q16540 153 aaKnown RBP11.11□□□□□ -0.63
TRIM27-202ENST00000377199 C10orf25Q5T742 122 aa11.11□□□□□ -0.63
TRIM27-202ENST00000377199 KIAA0087Q14695 138 aa11.11□□□□□ -0.63
TRIM27-202ENST00000377199 UNQ6190/PRO20217Q6UXQ8 127 aa11.1□□□□□ -0.63
TRIM27-202ENST00000377199 Q8NDZ9 215 aa11.1□□□□□ -0.63
TRIM27-202ENST00000377199 LINC00643Q86TS7 51 aa11.1□□□□□ -0.63
TRIM27-202ENST00000377199 IGKV3D-7A0A0C4DH55 119 aa11.09□□□□□ -0.63
TRIM27-202ENST00000377199 SDIM1Q6ZPB5 146 aa11.09□□□□□ -0.63
TRIM27-202ENST00000377199 TRBV7-7A0A0K0K1E9 115 aa11.09□□□□□ -0.63
TRIM27-202ENST00000377199 Q8NAQ8 132 aa11.09□□□□□ -0.63
TRIM27-202ENST00000377199 PPDPFQ9H3Y8 114 aa11.09□□□□□ -0.63
TRIM27-202ENST00000377199 IGHV4-30-4P0DP06 118 aa11.08□□□□□ -0.64
TRIM27-202ENST00000377199 S100A7L2Q5SY68 101 aa11.08□□□□□ -0.64
TRIM27-202ENST00000377199 SPAG11BQ08648 103 aa11.08□□□□□ -0.64
TRIM27-202ENST00000377199 ORMDL1Q9P0S3 153 aa11.08□□□□□ -0.64
TRIM27-202ENST00000377199 C6orf99Q4VX62 202 aa11.07□□□□□ -0.64
TRIM27-202ENST00000377199 SPART-AS1P0CW21 52 aa11.07□□□□□ -0.64
TRIM27-202ENST00000377199 NANOS2P60321 138 aaKnown RBP11.07□□□□□ -0.64
TRIM27-202ENST00000377199 RETNQ9HD89 108 aa11.07□□□□□ -0.64
TRIM27-202ENST00000377199 LINC00846Q9NV44 126 aa11.06□□□□□ -0.64
TRIM27-202ENST00000377199 CXCL5P42830 114 aa11.05□□□□□ -0.64
TRIM27-202ENST00000377199 CYSRT1A8MQ03 144 aa11.04□□□□□ -0.64
TRIM27-202ENST00000377199 XAGE1AQ9HD64 81 aa11.04□□□□□ -0.64
TRIM27-202ENST00000377199 FLNBO75369 2602 aaKnown RBP11.04□□□□□ -0.64
TRIM27-202ENST00000377199 RPL18AQ02543 176 aaKnown RBP11.04□□□□□ -0.64
TRIM27-202ENST00000377199 TMEM126AQ9H061 195 aa11.04□□□□□ -0.64
TRIM27-202ENST00000377199 OXLD1Q5BKU9 147 aa11.04□□□□□ -0.64
TRIM27-202ENST00000377199 MIFP14174 115 aa11.03□□□□□ -0.64
TRIM27-202ENST00000377199 Q8N814 137 aa11.02□□□□□ -0.64
TRIM27-202ENST00000377199 KLK5Q9Y337 293 aaPredicted RBP11.02□□□□□ -0.64
TRIM27-202ENST00000377199 A0A087WVE0 104 aa11.01□□□□□ -0.65
TRIM27-202ENST00000377199 HIGD2BQ4VC39 106 aa11.01□□□□□ -0.65
TRIM27-202ENST00000377199 STAB1Q9NY15 2570 aa11.01□□□□□ -0.65
TRIM27-202ENST00000377199 LELP1Q5T871 98 aa11.01□□□□□ -0.65
TRIM27-202ENST00000377199 F8P00451 2351 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms