RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 COL4A4P53420 1690 aaPredicted RBP9.83□□□□□ -0.84
COL4A1-201ENST00000375820 PMAIP1Q13794 54 aa9.83□□□□□ -0.84
COL4A1-201ENST00000375820 LINC00575Q6W349 94 aa9.83□□□□□ -0.84
COL4A1-201ENST00000375820 ANKHD1Q8IWZ3 2542 aaKnown RBP9.83□□□□□ -0.84
COL4A1-201ENST00000375820 FSTL3O95633 263 aa9.82□□□□□ -0.84
COL4A1-201ENST00000375820 A0A087WSZ3 146 aa9.82□□□□□ -0.84
COL4A1-201ENST00000375820 IMUPQ9GZP8 106 aa9.82□□□□□ -0.84
COL4A1-201ENST00000375820 PRLHP81277 87 aa9.81□□□□□ -0.84
COL4A1-201ENST00000375820 CRYGAP11844 174 aa9.81□□□□□ -0.84
COL4A1-201ENST00000375820 EML5Q05BV3 1969 aa9.81□□□□□ -0.84
COL4A1-201ENST00000375820 FHL2Q14192 279 aa9.81□□□□□ -0.84
COL4A1-201ENST00000375820 URB1-AS1Q96HZ7 61 aa9.8□□□□□ -0.84
COL4A1-201ENST00000375820 TTC28Q96AY4 2481 aa9.8□□□□□ -0.84
COL4A1-201ENST00000375820 EGFEM1PQ0D2K5 195 aa9.79□□□□□ -0.84
COL4A1-201ENST00000375820 Q8N3U1 123 aa9.79□□□□□ -0.84
COL4A1-201ENST00000375820 CACNA1AO00555 2505 aa9.78□□□□□ -0.84
COL4A1-201ENST00000375820 LTBP2Q14767 1821 aa9.78□□□□□ -0.84
COL4A1-201ENST00000375820 TRAV7A0A075B6U4 112 aa9.78□□□□□ -0.84
COL4A1-201ENST00000375820 H0Y9P7 68 aa9.78□□□□□ -0.84
COL4A1-201ENST00000375820 ATG2AQ2TAZ0 1938 aa9.77□□□□□ -0.85
COL4A1-201ENST00000375820 MUC4Q99102 2169 aa9.77□□□□□ -0.85
COL4A1-201ENST00000375820 LINC00310P59036 64 aa9.77□□□□□ -0.85
COL4A1-201ENST00000375820 TRBV7-7A0A0K0K1E9 115 aa9.76□□□□□ -0.85
COL4A1-201ENST00000375820 SMIM26A0A096LP01 95 aa9.76□□□□□ -0.85
COL4A1-201ENST00000375820 HCG22E2RYF7 251 aa9.75□□□□□ -0.85
COL4A1-201ENST00000375820 IGKV2D-30A0A075B6S6 120 aa9.74□□□□□ -0.85
COL4A1-201ENST00000375820 IGKV2-30P06310 120 aa9.74□□□□□ -0.85
COL4A1-201ENST00000375820 IGLV1-51P01701 117 aa9.74□□□□□ -0.85
COL4A1-201ENST00000375820 C2orf48Q96LS8 159 aa9.74□□□□□ -0.85
COL4A1-201ENST00000375820 C1orf134Q5TEV5 83 aa9.73□□□□□ -0.85
COL4A1-201ENST00000375820 Q6ZRU5 148 aa9.73□□□□□ -0.85
COL4A1-201ENST00000375820 TET2Q6N021 2002 aaPredicted RBP9.72□□□□□ -0.85
COL4A1-201ENST00000375820 ABCA2Q9BZC7 2435 aa9.72□□□□□ -0.85
COL4A1-201ENST00000375820 LYPD5Q6UWN5 251 aa9.72□□□□□ -0.85
COL4A1-201ENST00000375820 AGRNO00468 2067 aa9.72□□□□□ -0.85
COL4A1-201ENST00000375820 CNFNQ9BYD5 112 aa9.72□□□□□ -0.85
COL4A1-201ENST00000375820 A0A1W2PPR1 153 aa9.7□□□□□ -0.86
COL4A1-201ENST00000375820 MYO18BQ8IUG5 2567 aa9.7□□□□□ -0.86
COL4A1-201ENST00000375820 NAV3Q8IVL0 2385 aa9.68□□□□□ -0.86
COL4A1-201ENST00000375820 C7orf65Q6ZTY9 151 aa9.68□□□□□ -0.86
COL4A1-201ENST00000375820 FSHBP01225 129 aa9.68□□□□□ -0.86
COL4A1-201ENST00000375820 SPACA4Q8TDM5 124 aa9.68□□□□□ -0.86
COL4A1-201ENST00000375820 DOPEY1Q5JWR5 2465 aa9.68□□□□□ -0.86
COL4A1-201ENST00000375820 LINC00846Q9NV44 126 aa9.67□□□□□ -0.86
COL4A1-201ENST00000375820 PLA2G1BP04054 148 aaKnown RBP9.67□□□□□ -0.86
COL4A1-201ENST00000375820 C2CD3Q4AC94 2353 aa9.66□□□□□ -0.86
COL4A1-201ENST00000375820 SMCR5Q8TEV8 140 aa9.66□□□□□ -0.86
COL4A1-201ENST00000375820 AMELXQ99217 191 aa9.66□□□□□ -0.86
COL4A1-201ENST00000375820 C22orf24Q9Y442 160 aa9.66□□□□□ -0.86
COL4A1-201ENST00000375820 SMIM29Q86T20 159 aa9.65□□□□□ -0.86
COL4A1-201ENST00000375820 MUC7Q8TAX7 377 aa9.64□□□□□ -0.87
COL4A1-201ENST00000375820 C1orf64Q8NEQ6 169 aa9.64□□□□□ -0.87
COL4A1-201ENST00000375820 CCDC168Q8NDH2 2452 aa9.64□□□□□ -0.87
COL4A1-201ENST00000375820 A0A096LNJ9 63 aa9.64□□□□□ -0.87
COL4A1-201ENST00000375820 KIAA0087Q14695 138 aa9.64□□□□□ -0.87
COL4A1-201ENST00000375820 LINC00337Q8N6G1 96 aa9.64□□□□□ -0.87
COL4A1-201ENST00000375820 TMEM254Q8TBM7 123 aa9.63□□□□□ -0.87
COL4A1-201ENST00000375820 PRO3102Q9H379 93 aa9.63□□□□□ -0.87
COL4A1-201ENST00000375820 PTPRSQ13332 1948 aa9.62□□□□□ -0.87
COL4A1-201ENST00000375820 PIEZO2Q9H5I5 2752 aa9.61□□□□□ -0.87
COL4A1-201ENST00000375820 MOBPQ13875 183 aa9.61□□□□□ -0.87
COL4A1-201ENST00000375820 IGLV8-61A0A075B6I0 122 aa9.61□□□□□ -0.87
COL4A1-201ENST00000375820 CHTF8P0CG12 524 aa9.61□□□□□ -0.87
COL4A1-201ENST00000375820 MDFIQ99750 246 aa9.59□□□□□ -0.87
COL4A1-201ENST00000375820 COL5A1P20908 1838 aaPredicted RBP9.59□□□□□ -0.87
COL4A1-201ENST00000375820 CPAMD8Q8IZJ3 1885 aa9.59□□□□□ -0.87
COL4A1-201ENST00000375820 NAV2Q8IVL1 2488 aa9.59□□□□□ -0.87
COL4A1-201ENST00000375820 C16orf95Q9H693 158 aa9.58□□□□□ -0.88
COL4A1-201ENST00000375820 LRP4O75096 1905 aa9.58□□□□□ -0.88
COL4A1-201ENST00000375820 FHL3Q13643 280 aa9.58□□□□□ -0.88
COL4A1-201ENST00000375820 CSDC2Q9Y534 153 aaKnown RBP9.58□□□□□ -0.88
COL4A1-201ENST00000375820 LIMD2Q9BT23 127 aa9.56□□□□□ -0.88
COL4A1-201ENST00000375820 A0A1B0GUV1 79 aa9.56□□□□□ -0.88
COL4A1-201ENST00000375820 MUC22E2RYF6 1773 aaPredicted RBP9.55□□□□□ -0.88
COL4A1-201ENST00000375820 SPAG11AQ6PDA7 123 aa9.55□□□□□ -0.88
COL4A1-201ENST00000375820 A0A1B0GU69 56 aa9.55□□□□□ -0.88
COL4A1-201ENST00000375820 PHF5AQ7RTV0 110 aaKnown RBP9.54□□□□□ -0.88
COL4A1-201ENST00000375820 SPATA3Q8NHX4 192 aa9.54□□□□□ -0.88
COL4A1-201ENST00000375820 hDV103S1A0JD37 113 aa9.54□□□□□ -0.88
COL4A1-201ENST00000375820 LINC00167Q96N53 147 aa9.53□□□□□ -0.88
COL4A1-201ENST00000375820 Q8N2B8 174 aa9.53□□□□□ -0.88
COL4A1-201ENST00000375820 RPL37AP61513 92 aaKnown RBP9.53□□□□□ -0.88
COL4A1-201ENST00000375820 ADAMTS20P59510 1910 aa9.51□□□□□ -0.89
COL4A1-201ENST00000375820 C6orf48Q9UBA6 75 aa9.5□□□□□ -0.89
COL4A1-201ENST00000375820 C11orf72Q8NBR9 251 aa9.49□□□□□ -0.89
COL4A1-201ENST00000375820 FAM218AQ96MZ4 157 aa9.49□□□□□ -0.89
COL4A1-201ENST00000375820 CDIP1Q9H305 208 aa9.48□□□□□ -0.89
COL4A1-201ENST00000375820 ST20-AS1Q8NBB2 130 aa9.48□□□□□ -0.89
COL4A1-201ENST00000375820 IGF2RP11717 2491 aa9.47□□□□□ -0.89
COL4A1-201ENST00000375820 C4orf26Q17RF5 130 aa9.47□□□□□ -0.89
COL4A1-201ENST00000375820 CXCL6P80162 114 aa9.47□□□□□ -0.89
COL4A1-201ENST00000375820 F8WDY8 70 aa9.45□□□□□ -0.9
COL4A1-201ENST00000375820 KIF25-AS1Q9Y6Z4 181 aa9.45□□□□□ -0.9
COL4A1-201ENST00000375820 COX8CQ7Z4L0 72 aa9.44□□□□□ -0.9
COL4A1-201ENST00000375820 LINC00315P59091 139 aa9.43□□□□□ -0.9
COL4A1-201ENST00000375820 ACYP2P14621 99 aa9.43□□□□□ -0.9
COL4A1-201ENST00000375820 SERTAD4-AS1Q5TG53 156 aa9.42□□□□□ -0.9
COL4A1-201ENST00000375820 NCOR2Q9Y618 2525 aa9.42□□□□□ -0.9
COL4A1-201ENST00000375820 LINC00476Q8WZB0 136 aa9.42□□□□□ -0.9
COL4A1-201ENST00000375820 IGHV3OR16-9A0A0B4J2B5 98 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms