RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 A0A087WVE0 104 aa12.01□□□□□ -0.49
VARS-215ENST00000375663 SBSPONQ8IVN8 264 aa12.01□□□□□ -0.49
VARS-215ENST00000375663 WFDC9Q8NEX5 89 aa12□□□□□ -0.49
VARS-215ENST00000375663 MAP1AP78559 2803 aaPredicted RBP12□□□□□ -0.49
VARS-215ENST00000375663 FAM110AQ9BQ89 295 aa11.99□□□□□ -0.49
VARS-215ENST00000375663 IGLV5-39A0A0G2JS06 123 aa11.99□□□□□ -0.49
VARS-215ENST00000375663 KLK9Q2XQG4 91 aa11.99□□□□□ -0.49
VARS-215ENST00000375663 PRR3P79522 188 aaKnown RBP11.98□□□□□ -0.49
VARS-215ENST00000375663 C11orf72Q8NBR9 251 aa11.98□□□□□ -0.49
VARS-215ENST00000375663 INAFM1C9JVW0 142 aa11.98□□□□□ -0.49
VARS-215ENST00000375663 NDUFC2O95298 119 aa11.97□□□□□ -0.49
VARS-215ENST00000375663 KRTAP10-9P60411 292 aa11.97□□□□□ -0.49
VARS-215ENST00000375663 LINC00337Q8N6G1 96 aa11.97□□□□□ -0.49
VARS-215ENST00000375663 Q8N2B8 174 aa11.97□□□□□ -0.49
VARS-215ENST00000375663 CCKP06307 115 aa11.97□□□□□ -0.49
VARS-215ENST00000375663 COX17Q14061 63 aa11.96□□□□□ -0.49
VARS-215ENST00000375663 ZNF843Q8N446 348 aa11.96□□□□□ -0.49
VARS-215ENST00000375663 C9orf116Q5BN46 136 aaPredicted RBP11.95□□□□□ -0.5
VARS-215ENST00000375663 MIFP14174 115 aa11.95□□□□□ -0.5
VARS-215ENST00000375663 FHL2Q14192 279 aa11.95□□□□□ -0.5
VARS-215ENST00000375663 MGAQ8IWI9 3026 aa11.95□□□□□ -0.5
VARS-215ENST00000375663 TRBV7-7A0A0K0K1E9 115 aa11.95□□□□□ -0.5
VARS-215ENST00000375663 PRB2P02812 416 aaPredicted RBP11.95□□□□□ -0.5
VARS-215ENST00000375663 Q8N814 137 aa11.94□□□□□ -0.5
VARS-215ENST00000375663 UNQ6190/PRO20217Q6UXQ8 127 aa11.94□□□□□ -0.5
VARS-215ENST00000375663 NTM-AS1Q6ZSK4 140 aa11.94□□□□□ -0.5
VARS-215ENST00000375663 IGLV1-51P01701 117 aa11.93□□□□□ -0.5
VARS-215ENST00000375663 KLK5Q9Y337 293 aaPredicted RBP11.93□□□□□ -0.5
VARS-215ENST00000375663 CYSRT1A8MQ03 144 aa11.93□□□□□ -0.5
VARS-215ENST00000375663 AKAP13Q12802 2813 aa11.92□□□□□ -0.5
VARS-215ENST00000375663 C5orf47Q569G3 176 aa11.92□□□□□ -0.5
VARS-215ENST00000375663 MP68P56378 58 aa11.92□□□□□ -0.5
VARS-215ENST00000375663 LELP1Q5T871 98 aa11.92□□□□□ -0.5
VARS-215ENST00000375663 LINC00846Q9NV44 126 aa11.92□□□□□ -0.5
VARS-215ENST00000375663 SNURFQ9Y675 71 aa11.92□□□□□ -0.5
VARS-215ENST00000375663 IGLV5-45A0A087WSX0 123 aa11.91□□□□□ -0.5
VARS-215ENST00000375663 SOSTDC1Q6X4U4 206 aa11.9□□□□□ -0.5
VARS-215ENST00000375663 PLA2G2AP14555 144 aa11.9□□□□□ -0.5
VARS-215ENST00000375663 KIR2DL5BQ8NHK3 375 aa11.9□□□□□ -0.51
VARS-215ENST00000375663 ZNF73O43830 326 aaPredicted RBP11.89□□□□□ -0.51
VARS-215ENST00000375663 C3orf84H3BNL1 204 aa11.89□□□□□ -0.51
VARS-215ENST00000375663 SHISA2Q6UWI4 295 aa11.89□□□□□ -0.51
VARS-215ENST00000375663 SYCNQ0VAF6 134 aa11.88□□□□□ -0.51
VARS-215ENST00000375663 WDFY3Q8IZQ1 3526 aa11.87□□□□□ -0.51
VARS-215ENST00000375663 IGHV3OR16-9A0A0B4J2B5 98 aa11.87□□□□□ -0.51
VARS-215ENST00000375663 HILS1P60008 231 aa11.87□□□□□ -0.51
VARS-215ENST00000375663 MUC7Q8TAX7 377 aa11.87□□□□□ -0.51
VARS-215ENST00000375663 LITAFQ99732 161 aa11.87□□□□□ -0.51
VARS-215ENST00000375663 BOD1L1Q8NFC6 3051 aa11.87□□□□□ -0.51
VARS-215ENST00000375663 M0R378 163 aa11.86□□□□□ -0.51
VARS-215ENST00000375663 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.86□□□□□ -0.51
VARS-215ENST00000375663 C11orf45Q8TAV5 145 aa11.86□□□□□ -0.51
VARS-215ENST00000375663 IGKV2-28A0A075B6P5 120 aa11.86□□□□□ -0.51
VARS-215ENST00000375663 IGKV2D-28P01615 120 aa11.86□□□□□ -0.51
VARS-215ENST00000375663 FHL3Q13643 280 aa11.85□□□□□ -0.51
VARS-215ENST00000375663 BRK1Q8WUW1 75 aa11.85□□□□□ -0.51
VARS-215ENST00000375663 FAM218AQ96MZ4 157 aa11.85□□□□□ -0.51
VARS-215ENST00000375663 SMR3AQ99954 134 aa11.85□□□□□ -0.51
VARS-215ENST00000375663 DEFB131BA0A096LNP1 70 aa11.84□□□□□ -0.51
VARS-215ENST00000375663 A0A1B0GUV1 79 aa11.84□□□□□ -0.51
VARS-215ENST00000375663 TRBV10-3A0A0K0K1G6 114 aa11.84□□□□□ -0.51
VARS-215ENST00000375663 KPRPQ5T749 579 aaPredicted RBP11.83□□□□□ -0.52
VARS-215ENST00000375663 MPLKIPQ8TAP9 179 aa11.83□□□□□ -0.52
VARS-215ENST00000375663 HIGD2AQ9BW72 106 aa11.83□□□□□ -0.52
VARS-215ENST00000375663 IGKV2-24A0A0C4DH68 120 aa11.83□□□□□ -0.52
VARS-215ENST00000375663 FAM19A1Q7Z5A9 133 aa11.83□□□□□ -0.52
VARS-215ENST00000375663 NDUFS5O43920 106 aa11.82□□□□□ -0.52
VARS-215ENST00000375663 NDUFC1O43677 76 aa11.82□□□□□ -0.52
VARS-215ENST00000375663 TRAV7A0A075B6U4 112 aa11.81□□□□□ -0.52
VARS-215ENST00000375663 NDUFB1O75438 58 aa11.81□□□□□ -0.52
VARS-215ENST00000375663 FAM19A3Q7Z5A8 133 aa11.8□□□□□ -0.52
VARS-215ENST00000375663 A8MTW9 85 aa11.8□□□□□ -0.52
VARS-215ENST00000375663 CFAP46Q8IYW2 2715 aa11.8□□□□□ -0.52
VARS-215ENST00000375663 SETXQ7Z333 2677 aaKnown RBP11.8□□□□□ -0.52
VARS-215ENST00000375663 LOC107984640A0A0U1RRK4 108 aa11.79□□□□□ -0.52
VARS-215ENST00000375663 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.79□□□□□ -0.52
VARS-215ENST00000375663 FAM19A5Q7Z5A7 132 aaPredicted RBP11.79□□□□□ -0.52
VARS-215ENST00000375663 UBE2AP49459 152 aa11.79□□□□□ -0.52
VARS-215ENST00000375663 ZNF575Q86XF7 245 aa11.79□□□□□ -0.52
VARS-215ENST00000375663 NDUFC2-KCTD14E9PQ53 114 aa11.79□□□□□ -0.52
VARS-215ENST00000375663 C6orf223Q8N319 242 aa11.79□□□□□ -0.52
VARS-215ENST00000375663 LY6G6DO95868 133 aa11.78□□□□□ -0.52
VARS-215ENST00000375663 DMDP11532 3685 aa11.78□□□□□ -0.52
VARS-215ENST00000375663 EIF4EBP3O60516 100 aaPredicted RBP11.77□□□□□ -0.53
VARS-215ENST00000375663 LOC400499M0QZD8 3231 aa11.77□□□□□ -0.53
VARS-215ENST00000375663 LINC00575Q6W349 94 aa11.76□□□□□ -0.53
VARS-215ENST00000375663 Q8N3U1 123 aa11.76□□□□□ -0.53
VARS-215ENST00000375663 TEP1Q99973 2627 aaKnown RBP11.76□□□□□ -0.53
VARS-215ENST00000375663 HRCT1Q6UXD1 115 aa11.76□□□□□ -0.53
VARS-215ENST00000375663 PPDPFQ9H3Y8 114 aa11.76□□□□□ -0.53
VARS-215ENST00000375663 MUC3AQ02505 3323 aa11.75□□□□□ -0.53
VARS-215ENST00000375663 EGFEM1PQ0D2K5 195 aa11.75□□□□□ -0.53
VARS-215ENST00000375663 ATP5EP56381 51 aaPredicted RBP11.74□□□□□ -0.53
VARS-215ENST00000375663 IGHV4-30-4P0DP06 118 aa11.74□□□□□ -0.53
VARS-215ENST00000375663 LINC01561Q8N1V8 128 aa11.74□□□□□ -0.53
VARS-215ENST00000375663 A0A096LNI7 61 aa11.73□□□□□ -0.53
VARS-215ENST00000375663 RPL37AP8A6NKH3 93 aa11.73□□□□□ -0.53
VARS-215ENST00000375663 H0Y9J4 135 aa11.73□□□□□ -0.53
VARS-215ENST00000375663 Q6ZVQ6 151 aa11.73□□□□□ -0.53
VARS-215ENST00000375663 HELZ2Q9BYK8 2649 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms