RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 IGHV1OR15-1A0A075B7D0 117 aa8.7□□□□□ -1.02
C9orf3-203ENST00000375315 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.7□□□□□ -1.02
C9orf3-203ENST00000375315 IGLV5-39A0A0G2JS06 123 aa8.7□□□□□ -1.02
C9orf3-203ENST00000375315 IGKV2-29A2NJV5 120 aaPredicted RBP8.7□□□□□ -1.02
C9orf3-203ENST00000375315 XCL1P47992 114 aa8.7□□□□□ -1.02
C9orf3-203ENST00000375315 XCL2Q9UBD3 114 aa8.7□□□□□ -1.02
C9orf3-203ENST00000375315 TRAV23DV6A0A075B6W5 121 aa8.69□□□□□ -1.02
C9orf3-203ENST00000375315 C9orf129Q5T035 196 aaKnown RBP8.69□□□□□ -1.02
C9orf3-203ENST00000375315 CHCHD7Q9BUK0 85 aa8.69□□□□□ -1.02
C9orf3-203ENST00000375315 H0YGX0 51 aa8.69□□□□□ -1.02
C9orf3-203ENST00000375315 DGAT2L7PQ6IED9 249 aa8.69□□□□□ -1.02
C9orf3-203ENST00000375315 SMIM26A0A096LP01 95 aa8.69□□□□□ -1.02
C9orf3-203ENST00000375315 HILS1P60008 231 aa8.69□□□□□ -1.02
C9orf3-203ENST00000375315 DYNLRB2Q8TF09 96 aa8.69□□□□□ -1.02
C9orf3-203ENST00000375315 KNCNA6PVL3 124 aa8.68□□□□□ -1.02
C9orf3-203ENST00000375315 TMEM86BQ8N661 226 aa8.68□□□□□ -1.02
C9orf3-203ENST00000375315 A0A087WYN8 130 aa8.68□□□□□ -1.02
C9orf3-203ENST00000375315 COL6A5A8TX70 2615 aa8.68□□□□□ -1.02
C9orf3-203ENST00000375315 IGHV3-73A0A0B4J1V6 119 aa8.67□□□□□ -1.02
C9orf3-203ENST00000375315 PIK3CD-AS1Q5SR53 167 aa8.67□□□□□ -1.02
C9orf3-203ENST00000375315 LINC00467Q9BRT7 94 aa8.67□□□□□ -1.02
C9orf3-203ENST00000375315 NBEAL2Q6ZNJ1 2754 aa8.67□□□□□ -1.02
C9orf3-203ENST00000375315 NCR3O14931 201 aa8.67□□□□□ -1.02
C9orf3-203ENST00000375315 CCL24O00175 119 aa8.66□□□□□ -1.02
C9orf3-203ENST00000375315 CCKP06307 115 aa8.66□□□□□ -1.02
C9orf3-203ENST00000375315 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.66□□□□□ -1.02
C9orf3-203ENST00000375315 RNASE1P07998 156 aaKnown RBP8.66□□□□□ -1.02
C9orf3-203ENST00000375315 COX6A2Q02221 97 aa8.66□□□□□ -1.02
C9orf3-203ENST00000375315 V9GYY9 64 aa8.65□□□□□ -1.02
C9orf3-203ENST00000375315 H7BZZ5 65 aa8.65□□□□□ -1.02
C9orf3-203ENST00000375315 DEFB131AP59861 70 aa8.65□□□□□ -1.02
C9orf3-203ENST00000375315 SMIM1B2RUZ4 78 aa8.65□□□□□ -1.03
C9orf3-203ENST00000375315 LECT2O14960 151 aa8.65□□□□□ -1.03
C9orf3-203ENST00000375315 PRM2P04554 102 aa8.65□□□□□ -1.03
C9orf3-203ENST00000375315 PROK1P58294 105 aa8.64□□□□□ -1.03
C9orf3-203ENST00000375315 SEC61GP60059 68 aa8.64□□□□□ -1.03
C9orf3-203ENST00000375315 SMIM11BQ8TCY0 68 aa8.64□□□□□ -1.03
C9orf3-203ENST00000375315 TRBV10-3A0A0K0K1G6 114 aa8.64□□□□□ -1.03
C9orf3-203ENST00000375315 SPINK13Q1W4C9 94 aa8.64□□□□□ -1.03
C9orf3-203ENST00000375315 LINC00337Q8N6G1 96 aa8.64□□□□□ -1.03
C9orf3-203ENST00000375315 LINC00242Q5T6M2 205 aa8.63□□□□□ -1.03
C9orf3-203ENST00000375315 ENHOQ6UWT2 76 aa8.63□□□□□ -1.03
C9orf3-203ENST00000375315 FAM19A1Q7Z5A9 133 aa8.63□□□□□ -1.03
C9orf3-203ENST00000375315 WFDC9Q8NEX5 89 aa8.63□□□□□ -1.03
C9orf3-203ENST00000375315 C4orf3Q8WVX3 66 aa8.63□□□□□ -1.03
C9orf3-203ENST00000375315 BCE1O60756 84 aa8.63□□□□□ -1.03
C9orf3-203ENST00000375315 SND1-IT1Q9HBX3 110 aa8.63□□□□□ -1.03
C9orf3-203ENST00000375315 TRAV7A0A075B6U4 112 aa8.63□□□□□ -1.03
C9orf3-203ENST00000375315 C16orf95Q9H693 158 aa8.63□□□□□ -1.03
C9orf3-203ENST00000375315 ORMDL1Q9P0S3 153 aa8.63□□□□□ -1.03
C9orf3-203ENST00000375315 IGHV3OR16-12A0A075B7B8 117 aa8.62□□□□□ -1.03
C9orf3-203ENST00000375315 SNRPD3P62318 126 aaKnown RBP8.62□□□□□ -1.03
C9orf3-203ENST00000375315 TRRAPQ9Y4A5 3859 aa8.62□□□□□ -1.03
C9orf3-203ENST00000375315 TMEM89A2RUT3 159 aa8.62□□□□□ -1.03
C9orf3-203ENST00000375315 KRTAP10-3P60369 221 aa8.62□□□□□ -1.03
C9orf3-203ENST00000375315 C1orf195Q5TG92 126 aa8.62□□□□□ -1.03
C9orf3-203ENST00000375315 MIR7-3HGQ8N6C7 128 aa8.62□□□□□ -1.03
C9orf3-203ENST00000375315 K7EMT4 169 aa8.61□□□□□ -1.03
C9orf3-203ENST00000375315 UBL5Q9BZL1 73 aa8.61□□□□□ -1.03
C9orf3-203ENST00000375315 WFDC10AQ9H1F0 79 aa8.61□□□□□ -1.03
C9orf3-203ENST00000375315 IGHV3-38A0A0C4DH36 116 aa8.61□□□□□ -1.03
C9orf3-203ENST00000375315 JMJD7-PLA2G4BH0Y9G9 81 aa8.61□□□□□ -1.03
C9orf3-203ENST00000375315 RPL36AP83881 106 aaKnown RBP8.6□□□□□ -1.03
C9orf3-203ENST00000375315 FP248Q71RG6 208 aaPredicted RBP8.6□□□□□ -1.03
C9orf3-203ENST00000375315 RPL36ALQ969Q0 106 aaKnown RBP8.6□□□□□ -1.03
C9orf3-203ENST00000375315 IGKV2-28A0A075B6P5 120 aa8.6□□□□□ -1.03
C9orf3-203ENST00000375315 IGKV2D-28P01615 120 aa8.6□□□□□ -1.03
C9orf3-203ENST00000375315 KLKP1Q107X0 134 aa8.6□□□□□ -1.03
C9orf3-203ENST00000375315 BRK1Q8WUW1 75 aa8.6□□□□□ -1.03
C9orf3-203ENST00000375315 LYPD5Q6UWN5 251 aa8.6□□□□□ -1.03
C9orf3-203ENST00000375315 SPATA3Q8NHX4 192 aa8.6□□□□□ -1.03
C9orf3-203ENST00000375315 SLPIP03973 132 aa8.59□□□□□ -1.03
C9orf3-203ENST00000375315 K7EQG2 157 aa8.58□□□□□ -1.04
C9orf3-203ENST00000375315 FAM19A3Q7Z5A8 133 aa8.58□□□□□ -1.04
C9orf3-203ENST00000375315 Q9UF83 564 aa8.58□□□□□ -1.04
C9orf3-203ENST00000375315 RBM3P98179 157 aaKnown RBP8.58□□□□□ -1.04
C9orf3-203ENST00000375315 NOTCH1P46531 2555 aa8.58□□□□□ -1.04
C9orf3-203ENST00000375315 DEFB114Q30KQ6 69 aa8.57□□□□□ -1.04
C9orf3-203ENST00000375315 FBN1P35555 2871 aaKnown RBP8.57□□□□□ -1.04
C9orf3-203ENST00000375315 Q6ZSN1 163 aa8.57□□□□□ -1.04
C9orf3-203ENST00000375315 A0A0U1RQV1 116 aa8.56□□□□□ -1.04
C9orf3-203ENST00000375315 F8WEM9 126 aa8.56□□□□□ -1.04
C9orf3-203ENST00000375315 ATP5EP56381 51 aaPredicted RBP8.56□□□□□ -1.04
C9orf3-203ENST00000375315 NDUFC1O43677 76 aa8.56□□□□□ -1.04
C9orf3-203ENST00000375315 LINC00158P58513 81 aa8.56□□□□□ -1.04
C9orf3-203ENST00000375315 SS18Q15532 418 aa8.56□□□□□ -1.04
C9orf3-203ENST00000375315 TRBV7-6A0A0J9YX20 115 aa8.55□□□□□ -1.04
C9orf3-203ENST00000375315 IGHV3-53P01767 116 aa8.55□□□□□ -1.04
C9orf3-203ENST00000375315 SNURFQ9Y675 71 aa8.55□□□□□ -1.04
C9orf3-203ENST00000375315 RMI2Q96E14 147 aa8.54□□□□□ -1.04
C9orf3-203ENST00000375315 MAP6D1Q9H9H5 199 aa8.54□□□□□ -1.04
C9orf3-203ENST00000375315 TMEM256-PLSCR3K7ERE1 68 aa8.53□□□□□ -1.04
C9orf3-203ENST00000375315 CCL18P55774 89 aa8.53□□□□□ -1.04
C9orf3-203ENST00000375315 LINC00474Q9P2X8 69 aa8.53□□□□□ -1.04
C9orf3-203ENST00000375315 PAX4O43316 350 aa8.53□□□□□ -1.04
C9orf3-203ENST00000375315 COX7B2Q8TF08 81 aa8.53□□□□□ -1.04
C9orf3-203ENST00000375315 TOMM7Q9P0U1 55 aa8.51□□□□□ -1.05
C9orf3-203ENST00000375315 PKD1L1Q8TDX9 2849 aa8.51□□□□□ -1.05
C9orf3-203ENST00000375315 ODF3L2Q3SX64 289 aa8.51□□□□□ -1.05
C9orf3-203ENST00000375315 STHQ8IWL8 128 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms