RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 TRBV20OR9-2A0A075B6H5 130 aa5.43□□□□□ -1.54
HLA-DRA-201ENST00000374982 TRBV24-1A0A075B6N3 115 aa5.43□□□□□ -1.54
HLA-DRA-201ENST00000374982 TRAV13-1A0A0B4J241 112 aa5.43□□□□□ -1.54
HLA-DRA-201ENST00000374982 F2Z2F3 143 aa5.43□□□□□ -1.54
HLA-DRA-201ENST00000374982 RAB5AP20339 215 aa5.43□□□□□ -1.54
HLA-DRA-201ENST00000374982 UBE2AP49459 152 aa5.43□□□□□ -1.54
HLA-DRA-201ENST00000374982 RAB5BP61020 215 aa5.43□□□□□ -1.54
HLA-DRA-201ENST00000374982 COX19Q49B96 90 aa5.43□□□□□ -1.54
HLA-DRA-201ENST00000374982 RNASE13Q5GAN3 156 aaKnown RBP5.43□□□□□ -1.54
HLA-DRA-201ENST00000374982 TMA7Q9Y2S6 64 aaKnown RBP5.43□□□□□ -1.54
HLA-DRA-201ENST00000374982 TRGC1P0CF51 173 aa5.42□□□□□ -1.54
HLA-DRA-201ENST00000374982 FAM231DQ6ZW35 169 aa5.42□□□□□ -1.54
HLA-DRA-201ENST00000374982 MRPL55Q7Z7F7 128 aaKnown RBP5.42□□□□□ -1.54
HLA-DRA-201ENST00000374982 MRAP2Q96G30 205 aa5.42□□□□□ -1.54
HLA-DRA-201ENST00000374982 PACRGQ96M98 296 aaPredicted RBP5.42□□□□□ -1.54
HLA-DRA-201ENST00000374982 SDHAF1A6NFY7 115 aa5.41□□□□□ -1.54
HLA-DRA-201ENST00000374982 RPL37AP8A6NKH3 93 aa5.41□□□□□ -1.54
HLA-DRA-201ENST00000374982 GATCO43716 136 aaKnown RBP5.41□□□□□ -1.54
HLA-DRA-201ENST00000374982 EIF4EBP3O60516 100 aaPredicted RBP5.41□□□□□ -1.54
HLA-DRA-201ENST00000374982 CNFNQ9BYD5 112 aa5.41□□□□□ -1.54
HLA-DRA-201ENST00000374982 LINC00846Q9NV44 126 aa5.41□□□□□ -1.54
HLA-DRA-201ENST00000374982 NEBP20929 6669 aa5.41□□□□□ -1.54
HLA-DRA-201ENST00000374982 TRBV30A0A0K0K1B3 111 aa5.4□□□□□ -1.54
HLA-DRA-201ENST00000374982 A8MWL6 223 aa5.4□□□□□ -1.54
HLA-DRA-201ENST00000374982 S100A6P06703 90 aa5.4□□□□□ -1.54
HLA-DRA-201ENST00000374982 PMCHP20382 165 aa5.4□□□□□ -1.54
HLA-DRA-201ENST00000374982 LYZL1Q6UWQ5 148 aa5.4□□□□□ -1.54
HLA-DRA-201ENST00000374982 LINC00469Q8N7U9 141 aa5.4□□□□□ -1.54
HLA-DRA-201ENST00000374982 TP73-AS1Q9UF72 201 aa5.4□□□□□ -1.54
HLA-DRA-201ENST00000374982 I3L3M4 83 aa5.39□□□□□ -1.55
HLA-DRA-201ENST00000374982 CT83Q5H943 113 aa5.39□□□□□ -1.55
HLA-DRA-201ENST00000374982 Q8NBF4 154 aa5.39□□□□□ -1.55
HLA-DRA-201ENST00000374982 NUDT10Q8NFP7 164 aa5.39□□□□□ -1.55
HLA-DRA-201ENST00000374982 NUDT11Q96G61 164 aa5.39□□□□□ -1.55
HLA-DRA-201ENST00000374982 YPEL4Q96NS1 127 aa5.39□□□□□ -1.55
HLA-DRA-201ENST00000374982 TGIF2-C20orf24A0A0A6YYL0 155 aa5.38□□□□□ -1.55
HLA-DRA-201ENST00000374982 K7EN84 100 aa5.38□□□□□ -1.55
HLA-DRA-201ENST00000374982 SPINK1P00995 79 aa5.38□□□□□ -1.55
HLA-DRA-201ENST00000374982 S100A8P05109 93 aa5.38□□□□□ -1.55
HLA-DRA-201ENST00000374982 FOXA3P55318 350 aaPredicted RBP5.38□□□□□ -1.55
HLA-DRA-201ENST00000374982 C2orf82Q6UX34 121 aa5.38□□□□□ -1.55
HLA-DRA-201ENST00000374982 Q8N377 158 aa5.38□□□□□ -1.55
HLA-DRA-201ENST00000374982 BORCS7Q96B45 105 aa5.38□□□□□ -1.55
HLA-DRA-201ENST00000374982 LINC00167Q96N53 147 aa5.38□□□□□ -1.55
HLA-DRA-201ENST00000374982 XAGE1AQ9HD64 81 aa5.38□□□□□ -1.55
HLA-DRA-201ENST00000374982 NAT8BQ9UHF3 227 aa5.38□□□□□ -1.55
HLA-DRA-201ENST00000374982 V9GYV3 84 aa5.38□□□□□ -1.55
HLA-DRA-201ENST00000374982 IGHV3OR16-9A0A0B4J2B5 98 aa5.37□□□□□ -1.55
HLA-DRA-201ENST00000374982 SMIM27A0A1W2PRY6 76 aa5.37□□□□□ -1.55
HLA-DRA-201ENST00000374982 PRLHP81277 87 aa5.37□□□□□ -1.55
HLA-DRA-201ENST00000374982 KIAA0087Q14695 138 aa5.37□□□□□ -1.55
HLA-DRA-201ENST00000374982 KRTAP19-6Q3LI70 58 aa5.37□□□□□ -1.55
HLA-DRA-201ENST00000374982 SMIM15Q7Z3B0 74 aa5.37□□□□□ -1.55
HLA-DRA-201ENST00000374982 FAM19A2Q8N3H0 131 aa5.37□□□□□ -1.55
HLA-DRA-201ENST00000374982 RNASE7Q9H1E1 156 aaKnown RBP5.37□□□□□ -1.55
HLA-DRA-201ENST00000374982 A0A1B0GW15 77 aa5.36□□□□□ -1.55
HLA-DRA-201ENST00000374982 TWIST1Q15672 202 aa5.36□□□□□ -1.55
HLA-DRA-201ENST00000374982 Q6ZUT4 128 aa5.36□□□□□ -1.55
HLA-DRA-201ENST00000374982 ATP5L2Q7Z4Y8 100 aa5.36□□□□□ -1.55
HLA-DRA-201ENST00000374982 GNB1LQ9BYB4 327 aa5.36□□□□□ -1.55
HLA-DRA-201ENST00000374982 TRAPPC1Q9Y5R8 145 aa5.36□□□□□ -1.55
HLA-DRA-201ENST00000374982 GAGE10A6NGK3 116 aa5.35□□□□□ -1.55
HLA-DRA-201ENST00000374982 RIGQ13278 110 aa5.35□□□□□ -1.55
HLA-DRA-201ENST00000374982 PLEKHB2Q96CS7 222 aa5.35□□□□□ -1.55
HLA-DRA-201ENST00000374982 CSDC2Q9Y534 153 aaKnown RBP5.35□□□□□ -1.55
HLA-DRA-201ENST00000374982 TRGC2P03986 189 aa5.34□□□□□ -1.55
HLA-DRA-201ENST00000374982 HIGD1CA8MV81 97 aa5.33□□□□□ -1.56
HLA-DRA-201ENST00000374982 FABP9Q0Z7S8 132 aa5.33□□□□□ -1.56
HLA-DRA-201ENST00000374982 TRBV6-5A0A0K0K1A5 114 aa5.32□□□□□ -1.56
HLA-DRA-201ENST00000374982 A0A1B0GUT8 65 aa5.32□□□□□ -1.56
HLA-DRA-201ENST00000374982 MT2AP02795 61 aa5.32□□□□□ -1.56
HLA-DRA-201ENST00000374982 NDUFA6P56556 154 aa5.32□□□□□ -1.56
HLA-DRA-201ENST00000374982 HBBP68871 147 aa5.32□□□□□ -1.56
HLA-DRA-201ENST00000374982 KRTAP9-3Q9BYQ3 159 aa5.32□□□□□ -1.56
HLA-DRA-201ENST00000374982 LOC105371267A0A1B0GV96 52 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 C5orf52A6NGY3 159 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 SLC25A20O43772 301 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 HIST1H2BKO60814 126 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 HIST1H2BJP06899 126 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 HIST1H2BOP23527 126 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 S100A2P29034 98 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 HIST1H2BBP33778 126 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 HIST1H2BDP58876 126 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 RPS29P62273 56 aaKnown RBP5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 SNRPEP62304 92 aaKnown RBP5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 HIST1H2BCP62807 126 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 RPL32P62910 135 aaKnown RBP5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 HIST2H2BEQ16778 126 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 FAM19A1Q7Z5A9 133 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 HIST1H2BHQ93079 126 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 HIST1H2BNQ99877 126 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 HIST1H2BMQ99879 126 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 TMEM191AQ9H0A3 160 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 MUC12Q9UKN1 5478 aa5.31□□□□□ -1.56
HLA-DRA-201ENST00000374982 C9orf92A6NGG3 77 aa5.3□□□□□ -1.56
HLA-DRA-201ENST00000374982 MRPL54Q6P161 138 aaKnown RBP5.3□□□□□ -1.56
HLA-DRA-201ENST00000374982 TMEM136Q6ZRR5 245 aa5.3□□□□□ -1.56
HLA-DRA-201ENST00000374982 KRTAP4-11Q9BYQ6 195 aa5.3□□□□□ -1.56
HLA-DRA-201ENST00000374982 ST20Q9HBF5 79 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms