RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 CBLN2Q8IUK8 224 aa5.13□□□□□ -1.59
HLA-DOA-202ENST00000374813 Q8IZM0 81 aa5.13□□□□□ -1.59
HLA-DOA-202ENST00000374813 IGLV5-37A0A075B6J1 123 aa5.12□□□□□ -1.59
HLA-DOA-202ENST00000374813 F8VRH5 84 aa5.12□□□□□ -1.59
HLA-DOA-202ENST00000374813 SLC25A20O43772 301 aa5.12□□□□□ -1.59
HLA-DOA-202ENST00000374813 TOMM7Q9P0U1 55 aa5.12□□□□□ -1.59
HLA-DOA-202ENST00000374813 IGKV2-28A0A075B6P5 120 aa5.11□□□□□ -1.59
HLA-DOA-202ENST00000374813 A0A1B0GUT8 65 aa5.11□□□□□ -1.59
HLA-DOA-202ENST00000374813 HMSDA8MTL9 139 aa5.11□□□□□ -1.59
HLA-DOA-202ENST00000374813 HIGD1CA8MV81 97 aa5.11□□□□□ -1.59
HLA-DOA-202ENST00000374813 IGKV2D-28P01615 120 aa5.11□□□□□ -1.59
HLA-DOA-202ENST00000374813 C20orf78Q9BR46 151 aa5.11□□□□□ -1.59
HLA-DOA-202ENST00000374813 ALKBH7Q9BT30 221 aaPredicted RBP5.11□□□□□ -1.59
HLA-DOA-202ENST00000374813 TEX46H3BTG2 121 aa5.1□□□□□ -1.59
HLA-DOA-202ENST00000374813 FAM231DQ6ZW35 169 aa5.1□□□□□ -1.59
HLA-DOA-202ENST00000374813 Q8N377 158 aa5.1□□□□□ -1.59
HLA-DOA-202ENST00000374813 GEMIN7Q9H840 131 aaKnown RBP5.1□□□□□ -1.59
HLA-DOA-202ENST00000374813 ZNF706Q9Y5V0 76 aaPredicted RBP5.1□□□□□ -1.59
HLA-DOA-202ENST00000374813 KRTAP4-16G5E9R7 235 aaPredicted RBP5.09□□□□□ -1.59
HLA-DOA-202ENST00000374813 IFI27P40305 119 aaPredicted RBP5.09□□□□□ -1.59
HLA-DOA-202ENST00000374813 MRPL51Q4U2R6 128 aaKnown RBP5.09□□□□□ -1.59
HLA-DOA-202ENST00000374813 CT83Q5H943 113 aa5.09□□□□□ -1.59
HLA-DOA-202ENST00000374813 SPRR4Q96PI1 79 aa5.09□□□□□ -1.59
HLA-DOA-202ENST00000374813 TMEM126AQ9H061 195 aa5.09□□□□□ -1.59
HLA-DOA-202ENST00000374813 TRBV24-1A0A075B6N3 115 aa5.08□□□□□ -1.6
HLA-DOA-202ENST00000374813 LINC00862A6NCI5 91 aa5.08□□□□□ -1.6
HLA-DOA-202ENST00000374813 CXCL5P42830 114 aa5.08□□□□□ -1.6
HLA-DOA-202ENST00000374813 ZC2HC1BQ5TFG8 222 aa5.08□□□□□ -1.6
HLA-DOA-202ENST00000374813 HIGD2AQ9BW72 106 aa5.08□□□□□ -1.6
HLA-DOA-202ENST00000374813 PYGO1Q9Y3Y4 419 aa5.08□□□□□ -1.6
HLA-DOA-202ENST00000374813 TEX43Q6ZNM6 134 aa5.07□□□□□ -1.6
HLA-DOA-202ENST00000374813 LINC01551Q86U37 167 aa5.07□□□□□ -1.6
HLA-DOA-202ENST00000374813 TMEM141Q96I45 108 aa5.07□□□□□ -1.6
HLA-DOA-202ENST00000374813 C2orf88Q9BSF0 95 aa5.07□□□□□ -1.6
HLA-DOA-202ENST00000374813 TMEM238C9JI98 176 aa5.06□□□□□ -1.6
HLA-DOA-202ENST00000374813 FAM104BQ5XKR9 115 aa5.06□□□□□ -1.6
HLA-DOA-202ENST00000374813 KRTAP19-1Q8IUB9 90 aa5.06□□□□□ -1.6
HLA-DOA-202ENST00000374813 IGLV4-3A0A075B6K6 122 aa5.05□□□□□ -1.6
HLA-DOA-202ENST00000374813 M0R378 163 aa5.05□□□□□ -1.6
HLA-DOA-202ENST00000374813 CEBPGP53567 150 aa5.05□□□□□ -1.6
HLA-DOA-202ENST00000374813 RIGQ13278 110 aa5.05□□□□□ -1.6
HLA-DOA-202ENST00000374813 SSBP3-AS1Q7Z2R9 100 aa5.05□□□□□ -1.6
HLA-DOA-202ENST00000374813 SMIM2Q9BVW6 85 aa5.05□□□□□ -1.6
HLA-DOA-202ENST00000374813 EIF5A2Q9GZV4 153 aaKnown RBP5.05□□□□□ -1.6
HLA-DOA-202ENST00000374813 BATF3Q9NR55 127 aa5.05□□□□□ -1.6
HLA-DOA-202ENST00000374813 V9GYV3 84 aa5.05□□□□□ -1.6
HLA-DOA-202ENST00000374813 SCO1O75880 301 aa5.04□□□□□ -1.6
HLA-DOA-202ENST00000374813 NPYP01303 97 aa5.04□□□□□ -1.6
HLA-DOA-202ENST00000374813 RAB5AP20339 215 aa5.04□□□□□ -1.6
HLA-DOA-202ENST00000374813 CKS2P33552 79 aa5.04□□□□□ -1.6
HLA-DOA-202ENST00000374813 SEC11AP67812 179 aa5.04□□□□□ -1.6
HLA-DOA-202ENST00000374813 LINC00846Q9NV44 126 aa5.04□□□□□ -1.6
HLA-DOA-202ENST00000374813 TMEM250H0YL14 139 aa5.03□□□□□ -1.6
HLA-DOA-202ENST00000374813 TAGLN2P37802 199 aaKnown RBP5.03□□□□□ -1.6
HLA-DOA-202ENST00000374813 RAB5BP61020 215 aa5.03□□□□□ -1.6
HLA-DOA-202ENST00000374813 VCX2Q9H322 139 aa5.03□□□□□ -1.6
HLA-DOA-202ENST00000374813 OSTCQ9NRP0 149 aa5.03□□□□□ -1.6
HLA-DOA-202ENST00000374813 D6R8Y8 96 aa5.02□□□□□ -1.61
HLA-DOA-202ENST00000374813 HERVK_113P63121 156 aa5.02□□□□□ -1.61
HLA-DOA-202ENST00000374813 RPL24P83731 157 aaKnown RBP5.02□□□□□ -1.61
HLA-DOA-202ENST00000374813 RGS21Q2M5E4 152 aa5.02□□□□□ -1.61
HLA-DOA-202ENST00000374813 FAM19A3Q7Z5A8 133 aa5.02□□□□□ -1.61
HLA-DOA-202ENST00000374813 SMIM7Q9BQ49 75 aa5.02□□□□□ -1.61
HLA-DOA-202ENST00000374813 AMELXQ99217 191 aa5.01□□□□□ -1.61
HLA-DOA-202ENST00000374813 C2orf66Q6UXQ4 117 aa5□□□□□ -1.61
HLA-DOA-202ENST00000374813 CDKN2A-AS1Q9UH64 79 aa5□□□□□ -1.61
HLA-DOA-202ENST00000374813 C9orf92A6NGG3 77 aa4.99□□□□□ -1.61
HLA-DOA-202ENST00000374813 NPSP0C0P6 89 aa4.99□□□□□ -1.61
HLA-DOA-202ENST00000374813 MOBPQ13875 183 aa4.99□□□□□ -1.61
HLA-DOA-202ENST00000374813 FAM74A3Q4VXF1 159 aa4.99□□□□□ -1.61
HLA-DOA-202ENST00000374813 LINC00483Q53H64 154 aa4.99□□□□□ -1.61
HLA-DOA-202ENST00000374813 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
HLA-DOA-202ENST00000374813 NAT8BQ9UHF3 227 aa4.99□□□□□ -1.61
HLA-DOA-202ENST00000374813 IGLV9-49A0A0B4J1Y8 123 aa4.98□□□□□ -1.61
HLA-DOA-202ENST00000374813 SMIM27A0A1W2PRY6 76 aa4.98□□□□□ -1.61
HLA-DOA-202ENST00000374813 PPBPP02775 128 aa4.98□□□□□ -1.61
HLA-DOA-202ENST00000374813 VPREB1P12018 145 aa4.98□□□□□ -1.61
HLA-DOA-202ENST00000374813 PDZD11Q5EBL8 140 aa4.98□□□□□ -1.61
HLA-DOA-202ENST00000374813 PAPPA-AS1Q5QFB9 102 aa4.98□□□□□ -1.61
HLA-DOA-202ENST00000374813 MRPL54Q6P161 138 aaKnown RBP4.98□□□□□ -1.61
HLA-DOA-202ENST00000374813 AKAP14Q86UN6 197 aa4.98□□□□□ -1.61
HLA-DOA-202ENST00000374813 SLC51BQ86UW2 128 aa4.98□□□□□ -1.61
HLA-DOA-202ENST00000374813 COX7B2Q8TF08 81 aa4.98□□□□□ -1.61
HLA-DOA-202ENST00000374813 A0A1B0GW15 77 aa4.97□□□□□ -1.61
HLA-DOA-202ENST00000374813 SRP19P09132 144 aaKnown RBP4.97□□□□□ -1.61
HLA-DOA-202ENST00000374813 RPL23P62829 140 aaKnown RBP4.97□□□□□ -1.61
HLA-DOA-202ENST00000374813 KRTAP6-3Q3LI67 103 aa4.97□□□□□ -1.61
HLA-DOA-202ENST00000374813 ALKAL2Q6UX46 152 aa4.97□□□□□ -1.61
HLA-DOA-202ENST00000374813 SMCR5Q8TEV8 140 aa4.97□□□□□ -1.61
HLA-DOA-202ENST00000374813 LOC389332A0A1B0GUA5 103 aa4.96□□□□□ -1.62
HLA-DOA-202ENST00000374813 A0A1B0GXF2 115 aa4.96□□□□□ -1.62
HLA-DOA-202ENST00000374813 ATP5LO75964 103 aa4.96□□□□□ -1.62
HLA-DOA-202ENST00000374813 GAGE2AQ6NT46 116 aa4.96□□□□□ -1.62
HLA-DOA-202ENST00000374813 CYSLTR1Q9Y271 337 aa4.96□□□□□ -1.62
HLA-DOA-202ENST00000374813 IGIPA6NJ69 53 aa4.95□□□□□ -1.62
HLA-DOA-202ENST00000374813 SMIM1B2RUZ4 78 aa4.95□□□□□ -1.62
HLA-DOA-202ENST00000374813 F8W036 122 aa4.95□□□□□ -1.62
HLA-DOA-202ENST00000374813 IGLV6-57P01721 117 aa4.95□□□□□ -1.62
HLA-DOA-202ENST00000374813 PFN2P35080 140 aa4.95□□□□□ -1.62
HLA-DOA-202ENST00000374813 RAB14P61106 215 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms