RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 K7EQG2 157 aa4.65□□□□□ -1.66
PTPN3-202ENST00000374541 MRGPRG-AS1Q2M3A8 158 aa4.65□□□□□ -1.66
PTPN3-202ENST00000374541 RITA1Q96K30 269 aa4.65□□□□□ -1.66
PTPN3-202ENST00000374541 A0A087WZ39 114 aa4.65□□□□□ -1.67
PTPN3-202ENST00000374541 CCDC140Q96MF4 163 aa4.65□□□□□ -1.67
PTPN3-202ENST00000374541 ODF3BA8MYP8 253 aa4.65□□□□□ -1.67
PTPN3-202ENST00000374541 SCXQ7RTU7 201 aa4.65□□□□□ -1.67
PTPN3-202ENST00000374541 NRACQ8N912 160 aa4.65□□□□□ -1.67
PTPN3-202ENST00000374541 LINC00526Q96FQ7 95 aa4.65□□□□□ -1.67
PTPN3-202ENST00000374541 BAHCC1Q9P281 2608 aa4.65□□□□□ -1.67
PTPN3-202ENST00000374541 FLNCQ14315 2725 aa4.65□□□□□ -1.67
PTPN3-202ENST00000374541 TRBV6-8A0A0A6YYG3 113 aa4.64□□□□□ -1.67
PTPN3-202ENST00000374541 IGLV2-14P01704 120 aa4.64□□□□□ -1.67
PTPN3-202ENST00000374541 CD164L2Q6UWJ8 174 aa4.64□□□□□ -1.67
PTPN3-202ENST00000374541 MSMPQ1L6U9 139 aa4.64□□□□□ -1.67
PTPN3-202ENST00000374541 KPRPQ5T749 579 aaPredicted RBP4.64□□□□□ -1.67
PTPN3-202ENST00000374541 RNF185Q96GF1 192 aa4.64□□□□□ -1.67
PTPN3-202ENST00000374541 M0QY20 66 aa4.64□□□□□ -1.67
PTPN3-202ENST00000374541 CEMP1Q6PRD7 247 aaPredicted RBP4.64□□□□□ -1.67
PTPN3-202ENST00000374541 C1orf158Q8N1D5 194 aa4.64□□□□□ -1.67
PTPN3-202ENST00000374541 ZNF80P51504 273 aaPredicted RBP4.64□□□□□ -1.67
PTPN3-202ENST00000374541 Q6ZTI0 123 aa4.64□□□□□ -1.67
PTPN3-202ENST00000374541 VPREB1P12018 145 aa4.64□□□□□ -1.67
PTPN3-202ENST00000374541 WFDC10AQ9H1F0 79 aa4.64□□□□□ -1.67
PTPN3-202ENST00000374541 LINC00474Q9P2X8 69 aa4.64□□□□□ -1.67
PTPN3-202ENST00000374541 Q6ZQY7 126 aa4.63□□□□□ -1.67
PTPN3-202ENST00000374541 ZNF469Q96JG9 3925 aaPredicted RBP4.63□□□□□ -1.67
PTPN3-202ENST00000374541 IGLV4-69A0A075B6H9 119 aa4.63□□□□□ -1.67
PTPN3-202ENST00000374541 PROK1P58294 105 aa4.63□□□□□ -1.67
PTPN3-202ENST00000374541 UNQ9165/PRO28630Q6UXU0 137 aa4.63□□□□□ -1.67
PTPN3-202ENST00000374541 MED12LQ86YW9 2145 aa4.63□□□□□ -1.67
PTPN3-202ENST00000374541 FN1P02751 2386 aaKnown RBP4.63□□□□□ -1.67
PTPN3-202ENST00000374541 ARHGAP21Q5T5U3 1957 aa4.63□□□□□ -1.67
PTPN3-202ENST00000374541 DOCK11Q5JSL3 2073 aa4.63□□□□□ -1.67
PTPN3-202ENST00000374541 PLA2G1BP04054 148 aaKnown RBP4.63□□□□□ -1.67
PTPN3-202ENST00000374541 SNURFQ9Y675 71 aa4.63□□□□□ -1.67
PTPN3-202ENST00000374541 LOC107984640A0A0U1RRK4 108 aa4.62□□□□□ -1.67
PTPN3-202ENST00000374541 SLPIP03973 132 aa4.62□□□□□ -1.67
PTPN3-202ENST00000374541 UBE2D3P61077 147 aa4.62□□□□□ -1.67
PTPN3-202ENST00000374541 GDF5OSQ5U4N7 250 aa4.62□□□□□ -1.67
PTPN3-202ENST00000374541 WFDC13Q8IUB5 93 aa4.62□□□□□ -1.67
PTPN3-202ENST00000374541 CCDC179H3BU77 68 aa4.62□□□□□ -1.67
PTPN3-202ENST00000374541 IGLV2-11P01706 119 aa4.62□□□□□ -1.67
PTPN3-202ENST00000374541 FHL3Q13643 280 aa4.62□□□□□ -1.67
PTPN3-202ENST00000374541 NACAE9PAV3 2078 aa4.62□□□□□ -1.67
PTPN3-202ENST00000374541 PCNX3Q9H6A9 2034 aa4.62□□□□□ -1.67
PTPN3-202ENST00000374541 ZNF73O43830 326 aaPredicted RBP4.62□□□□□ -1.67
PTPN3-202ENST00000374541 XGP55808 180 aa4.62□□□□□ -1.67
PTPN3-202ENST00000374541 PMAIP1Q13794 54 aa4.62□□□□□ -1.67
PTPN3-202ENST00000374541 TET2Q6N021 2002 aaPredicted RBP4.62□□□□□ -1.67
PTPN3-202ENST00000374541 TLN2Q9Y4G6 2542 aa4.62□□□□□ -1.67
PTPN3-202ENST00000374541 PTPRBP23467 1997 aa4.62□□□□□ -1.67
PTPN3-202ENST00000374541 Q8IZM0 81 aa4.61□□□□□ -1.67
PTPN3-202ENST00000374541 MAPKAPK5-AS1Q8N8E1 139 aa4.61□□□□□ -1.67
PTPN3-202ENST00000374541 EBI3Q14213 229 aa4.61□□□□□ -1.67
PTPN3-202ENST00000374541 FAM19A5Q7Z5A7 132 aaPredicted RBP4.61□□□□□ -1.67
PTPN3-202ENST00000374541 LY6LH3BQJ8 138 aa4.61□□□□□ -1.67
PTPN3-202ENST00000374541 M0QXV9 152 aa4.61□□□□□ -1.67
PTPN3-202ENST00000374541 F8WDY8 70 aa4.61□□□□□ -1.67
PTPN3-202ENST00000374541 NTM-AS1Q6ZSK4 140 aa4.61□□□□□ -1.67
PTPN3-202ENST00000374541 CHCHD7Q9BUK0 85 aa4.61□□□□□ -1.67
PTPN3-202ENST00000374541 Q8N976 141 aa4.6□□□□□ -1.67
PTPN3-202ENST00000374541 NBPF19A0A087WUL8 3843 aa4.6□□□□□ -1.67
PTPN3-202ENST00000374541 PRYO14603 147 aa4.6□□□□□ -1.67
PTPN3-202ENST00000374541 CPAMD8Q8IZJ3 1885 aa4.6□□□□□ -1.67
PTPN3-202ENST00000374541 LELP1Q5T871 98 aa4.6□□□□□ -1.67
PTPN3-202ENST00000374541 C2orf91Q6ZV80 131 aa4.6□□□□□ -1.67
PTPN3-202ENST00000374541 YPEL4Q96NS1 127 aa4.6□□□□□ -1.67
PTPN3-202ENST00000374541 E7EUB6 86 aa4.6□□□□□ -1.67
PTPN3-202ENST00000374541 TSHBP01222 138 aa4.6□□□□□ -1.67
PTPN3-202ENST00000374541 LINC00694P0DN24 101 aa4.6□□□□□ -1.67
PTPN3-202ENST00000374541 ZFAND3Q9H8U3 227 aa4.59□□□□□ -1.67
PTPN3-202ENST00000374541 TP53TG3Q9ULZ0 132 aa4.59□□□□□ -1.67
PTPN3-202ENST00000374541 A0A096LNI7 61 aa4.59□□□□□ -1.67
PTPN3-202ENST00000374541 HRCT1Q6UXD1 115 aa4.59□□□□□ -1.67
PTPN3-202ENST00000374541 SBSPONQ8IVN8 264 aa4.59□□□□□ -1.67
PTPN3-202ENST00000374541 POM121L12Q8N7R1 296 aa4.59□□□□□ -1.67
PTPN3-202ENST00000374541 SMIM11BQ8TCY0 68 aa4.59□□□□□ -1.67
PTPN3-202ENST00000374541 XAGE1AQ9HD64 81 aa4.59□□□□□ -1.67
PTPN3-202ENST00000374541 C10orf25Q5T742 122 aa4.58□□□□□ -1.68
PTPN3-202ENST00000374541 POLR2KP53803 58 aaKnown RBP4.58□□□□□ -1.68
PTPN3-202ENST00000374541 PRO0628Q9UI54 55 aa4.58□□□□□ -1.68
PTPN3-202ENST00000374541 RPL28P46779 137 aaKnown RBP4.58□□□□□ -1.68
PTPN3-202ENST00000374541 Q6ZS46 218 aa4.58□□□□□ -1.68
PTPN3-202ENST00000374541 Q6ZTC4 211 aa4.58□□□□□ -1.68
PTPN3-202ENST00000374541 LINC00337Q8N6G1 96 aa4.58□□□□□ -1.68
PTPN3-202ENST00000374541 PCSK5Q92824 1860 aa4.58□□□□□ -1.68
PTPN3-202ENST00000374541 LINC00959A0A1B0GUT2 108 aa4.58□□□□□ -1.68
PTPN3-202ENST00000374541 Q6ZVQ6 151 aa4.58□□□□□ -1.68
PTPN3-202ENST00000374541 CNFNQ9BYD5 112 aa4.58□□□□□ -1.68
PTPN3-202ENST00000374541 DEFB1P60022 68 aa4.58□□□□□ -1.68
PTPN3-202ENST00000374541 EGFEM1PQ0D2K5 195 aa4.58□□□□□ -1.68
PTPN3-202ENST00000374541 hDV103S1A0JD37 113 aa4.57□□□□□ -1.68
PTPN3-202ENST00000374541 C6orf223Q8N319 242 aa4.57□□□□□ -1.68
PTPN3-202ENST00000374541 TRBV10-3A0A0K0K1G6 114 aa4.57□□□□□ -1.68
PTPN3-202ENST00000374541 HELZ2Q9BYK8 2649 aaKnown RBP4.57□□□□□ -1.68
PTPN3-202ENST00000374541 TRBV7-6A0A0J9YX20 115 aa4.57□□□□□ -1.68
PTPN3-202ENST00000374541 TRBV7-7A0A0K0K1E9 115 aa4.57□□□□□ -1.68
PTPN3-202ENST00000374541 KLLNB2CW77 178 aa4.57□□□□□ -1.68
PTPN3-202ENST00000374541 FAM30AQ9NZY2 134 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms