RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 HTN3P15516 51 aa16.41■□□□□ 0.22
CDK9-201ENST00000373264 C6orf226Q5I0X4 101 aa16.41■□□□□ 0.22
CDK9-201ENST00000373264 A0A1B0GUV1 79 aa16.4■□□□□ 0.22
CDK9-201ENST00000373264 LYRM9A8MSI8 78 aa16.4■□□□□ 0.22
CDK9-201ENST00000373264 CITED1Q99966 193 aa16.4■□□□□ 0.22
CDK9-201ENST00000373264 DAD1P61803 113 aa16.39■□□□□ 0.21
CDK9-201ENST00000373264 SS18Q15532 418 aa16.39■□□□□ 0.21
CDK9-201ENST00000373264 CRPP02741 224 aa16.38■□□□□ 0.21
CDK9-201ENST00000373264 Q8NAQ8 132 aa16.38■□□□□ 0.21
CDK9-201ENST00000373264 Q9HAA7 133 aa16.38■□□□□ 0.21
CDK9-201ENST00000373264 PKD1L1Q8TDX9 2849 aa16.37■□□□□ 0.21
CDK9-201ENST00000373264 IBA57-AS1B1ANH7 110 aa16.36■□□□□ 0.21
CDK9-201ENST00000373264 APOC4P55056 127 aa16.36■□□□□ 0.21
CDK9-201ENST00000373264 SMIM11BQ8TCY0 68 aa16.36■□□□□ 0.21
CDK9-201ENST00000373264 ANGP03950 147 aaKnown RBP16.35■□□□□ 0.21
CDK9-201ENST00000373264 C22orf24Q9Y442 160 aa16.35■□□□□ 0.21
CDK9-201ENST00000373264 TRAV13-2A0A0B4J235 113 aa16.34■□□□□ 0.21
CDK9-201ENST00000373264 IGHV4-30-4P0DP06 118 aa16.34■□□□□ 0.21
CDK9-201ENST00000373264 CKS1BP61024 79 aa16.33■□□□□ 0.2
CDK9-201ENST00000373264 PRR3P79522 188 aaKnown RBP16.33■□□□□ 0.2
CDK9-201ENST00000373264 RPL28P46779 137 aaKnown RBP16.32■□□□□ 0.2
CDK9-201ENST00000373264 CHCHD10Q8WYQ3 142 aaPredicted RBP16.32■□□□□ 0.2
CDK9-201ENST00000373264 F8P00451 2351 aa16.32■□□□□ 0.2
CDK9-201ENST00000373264 A0A087WYN8 130 aa16.31■□□□□ 0.2
CDK9-201ENST00000373264 C9orf116Q5BN46 136 aaPredicted RBP16.31■□□□□ 0.2
CDK9-201ENST00000373264 ANK2Q01484 3957 aa16.31■□□□□ 0.2
CDK9-201ENST00000373264 BAALC-AS2P0C853 105 aa16.3■□□□□ 0.2
CDK9-201ENST00000373264 REG3AQ06141 175 aa16.3■□□□□ 0.2
CDK9-201ENST00000373264 ATP5G1P05496 136 aa16.3■□□□□ 0.2
CDK9-201ENST00000373264 TTC32Q5I0X7 151 aa16.3■□□□□ 0.2
CDK9-201ENST00000373264 PPDPFQ9H3Y8 114 aa16.29■□□□□ 0.2
CDK9-201ENST00000373264 Q8IZM0 81 aa16.29■□□□□ 0.2
CDK9-201ENST00000373264 C15orf53Q8NAA6 179 aa16.29■□□□□ 0.2
CDK9-201ENST00000373264 OR13C6PQ8NH95 151 aa16.29■□□□□ 0.2
CDK9-201ENST00000373264 KIAA0087Q14695 138 aa16.28■□□□□ 0.2
CDK9-201ENST00000373264 LINC00526Q96FQ7 95 aa16.28■□□□□ 0.2
CDK9-201ENST00000373264 FLNBO75369 2602 aaKnown RBP16.28■□□□□ 0.2
CDK9-201ENST00000373264 TRACP01848 142 aa16.27■□□□□ 0.2
CDK9-201ENST00000373264 DEFB121Q5J5C9 76 aa16.27■□□□□ 0.2
CDK9-201ENST00000373264 OXLD1Q5BKU9 147 aa16.26■□□□□ 0.19
CDK9-201ENST00000373264 RETNQ9HD89 108 aa16.26■□□□□ 0.19
CDK9-201ENST00000373264 STAB1Q9NY15 2570 aa16.26■□□□□ 0.19
CDK9-201ENST00000373264 CD164L2Q6UWJ8 174 aa16.26■□□□□ 0.19
CDK9-201ENST00000373264 SNCGO76070 127 aa16.25■□□□□ 0.19
CDK9-201ENST00000373264 MIFP14174 115 aa16.25■□□□□ 0.19
CDK9-201ENST00000373264 C9orf129Q5T035 196 aaKnown RBP16.25■□□□□ 0.19
CDK9-201ENST00000373264 FBN1P35555 2871 aaKnown RBP16.25■□□□□ 0.19
CDK9-201ENST00000373264 TENM3Q9P273 2699 aa16.24■□□□□ 0.19
CDK9-201ENST00000373264 SPART-AS1P0CW21 52 aa16.24■□□□□ 0.19
CDK9-201ENST00000373264 WFDC9Q8NEX5 89 aa16.24■□□□□ 0.19
CDK9-201ENST00000373264 C6orf223Q8N319 242 aa16.23■□□□□ 0.19
CDK9-201ENST00000373264 A0A1B0GV72 72 aa16.22■□□□□ 0.19
CDK9-201ENST00000373264 MALP21145 153 aa16.22■□□□□ 0.19
CDK9-201ENST00000373264 Q8NDZ9 215 aa16.22■□□□□ 0.19
CDK9-201ENST00000373264 SLPIP03973 132 aa16.2■□□□□ 0.18
CDK9-201ENST00000373264 C10orf25Q5T742 122 aa16.2■□□□□ 0.18
CDK9-201ENST00000373264 KLK12Q9UKR0 248 aa16.2■□□□□ 0.18
CDK9-201ENST00000373264 MRPL23Q16540 153 aaKnown RBP16.19■□□□□ 0.18
CDK9-201ENST00000373264 LECT2O14960 151 aa16.19■□□□□ 0.18
CDK9-201ENST00000373264 CFAP161Q6P656 301 aa16.19■□□□□ 0.18
CDK9-201ENST00000373264 KRTAP10-11P60412 298 aa16.18■□□□□ 0.18
CDK9-201ENST00000373264 GAGE2BQ13066 116 aa16.18■□□□□ 0.18
CDK9-201ENST00000373264 GAGE2EQ4V326 116 aa16.18■□□□□ 0.18
CDK9-201ENST00000373264 GAGE2DQ9UEU5 116 aa16.18■□□□□ 0.18
CDK9-201ENST00000373264 NANOS2P60321 138 aaKnown RBP16.17■□□□□ 0.18
CDK9-201ENST00000373264 SMCR5Q8TEV8 140 aa16.17■□□□□ 0.18
CDK9-201ENST00000373264 UNQ6190/PRO20217Q6UXQ8 127 aa16.16■□□□□ 0.18
CDK9-201ENST00000373264 LELP1Q5T871 98 aa16.15■□□□□ 0.18
CDK9-201ENST00000373264 FAM240AA0A1B0GVK7 77 aa16.14■□□□□ 0.18
CDK9-201ENST00000373264 LINC01561Q8N1V8 128 aa16.13■□□□□ 0.17
CDK9-201ENST00000373264 CMYA5Q8N3K9 4069 aa16.13■□□□□ 0.17
CDK9-201ENST00000373264 DNAL4O96015 105 aa16.13■□□□□ 0.17
CDK9-201ENST00000373264 ENHOQ6UWT2 76 aa16.13■□□□□ 0.17
CDK9-201ENST00000373264 NCR3O14931 201 aa16.12■□□□□ 0.17
CDK9-201ENST00000373264 WIPF1O43516 503 aa16.12■□□□□ 0.17
CDK9-201ENST00000373264 NHLRC4P0CG21 123 aaPredicted RBP16.12■□□□□ 0.17
CDK9-201ENST00000373264 LYPD5Q6UWN5 251 aa16.11■□□□□ 0.17
CDK9-201ENST00000373264 ANAPC13Q9BS18 74 aa16.11■□□□□ 0.17
CDK9-201ENST00000373264 SPAG11BQ08648 103 aa16.1■□□□□ 0.17
CDK9-201ENST00000373264 MAST4O15021 2626 aa16.09■□□□□ 0.17
CDK9-201ENST00000373264 H0YGX0 51 aa16.09■□□□□ 0.17
CDK9-201ENST00000373264 NOTCH1P46531 2555 aa16.09■□□□□ 0.17
CDK9-201ENST00000373264 GAGE2AQ6NT46 116 aa16.08■□□□□ 0.17
CDK9-201ENST00000373264 C14orf132Q9NPU4 83 aa16.08■□□□□ 0.17
CDK9-201ENST00000373264 CYSRT1A8MQ03 144 aa16.08■□□□□ 0.16
CDK9-201ENST00000373264 WFDC10BQ8IUB3 73 aa16.08■□□□□ 0.16
CDK9-201ENST00000373264 NDUFV3P56181 108 aaKnown RBP16.07■□□□□ 0.16
CDK9-201ENST00000373264 PRR34Q9NV39 138 aa16.07■□□□□ 0.16
CDK9-201ENST00000373264 Q6ZTC4 211 aa16.06■□□□□ 0.16
CDK9-201ENST00000373264 CXCL5P42830 114 aa16.06■□□□□ 0.16
CDK9-201ENST00000373264 COX17Q14061 63 aa16.05■□□□□ 0.16
CDK9-201ENST00000373264 KLK5Q9Y337 293 aaPredicted RBP16.04■□□□□ 0.16
CDK9-201ENST00000373264 KRTAP24-1Q3LI83 254 aa16.04■□□□□ 0.16
CDK9-201ENST00000373264 KPRPQ5T749 579 aaPredicted RBP16.03■□□□□ 0.16
CDK9-201ENST00000373264 Q6Q795 121 aa16.01■□□□□ 0.15
CDK9-201ENST00000373264 NDUFC2O95298 119 aa16■□□□□ 0.15
CDK9-201ENST00000373264 C6orf99Q4VX62 202 aa16■□□□□ 0.15
CDK9-201ENST00000373264 ACYP1P07311 99 aa15.99■□□□□ 0.15
CDK9-201ENST00000373264 INAFM2P0DMQ5 153 aa15.99■□□□□ 0.15
CDK9-201ENST00000373264 HIGD2BQ4VC39 106 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms