RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 Q6YL49 198 aa4.85□□□□□ -1.63
CHD6-203ENST00000373233 URB1-AS1Q96HZ7 61 aa4.85□□□□□ -1.63
CHD6-203ENST00000373233 RETNLBQ9BQ08 111 aa4.85□□□□□ -1.63
CHD6-203ENST00000373233 BBC3Q96PG8 261 aaPredicted RBP4.85□□□□□ -1.63
CHD6-203ENST00000373233 LINC00467Q9BRT7 94 aa4.85□□□□□ -1.63
CHD6-203ENST00000373233 COL6A5A8TX70 2615 aa4.85□□□□□ -1.63
CHD6-203ENST00000373233 C7orf65Q6ZTY9 151 aa4.85□□□□□ -1.63
CHD6-203ENST00000373233 UNC79Q9P2D8 2635 aa4.85□□□□□ -1.63
CHD6-203ENST00000373233 SMCPP49901 116 aaPredicted RBP4.84□□□□□ -1.63
CHD6-203ENST00000373233 TSPEAR-AS2P59090 65 aa4.84□□□□□ -1.63
CHD6-203ENST00000373233 C4orf3Q8WVX3 66 aa4.84□□□□□ -1.63
CHD6-203ENST00000373233 KRTAP10-9P60411 292 aa4.84□□□□□ -1.63
CHD6-203ENST00000373233 SZT2Q5T011 3432 aa4.84□□□□□ -1.63
CHD6-203ENST00000373233 LINC00208Q96KT6 92 aa4.84□□□□□ -1.63
CHD6-203ENST00000373233 NHLRC4P0CG21 123 aaPredicted RBP4.84□□□□□ -1.63
CHD6-203ENST00000373233 LINC01547P58512 204 aaPredicted RBP4.84□□□□□ -1.63
CHD6-203ENST00000373233 KTN1-AS1Q86SY8 53 aa4.84□□□□□ -1.63
CHD6-203ENST00000373233 ZNF73O43830 326 aaPredicted RBP4.84□□□□□ -1.64
CHD6-203ENST00000373233 A0A087WYN8 130 aa4.83□□□□□ -1.64
CHD6-203ENST00000373233 C8orf87E5RJ46 101 aa4.83□□□□□ -1.64
CHD6-203ENST00000373233 HCG22E2RYF7 251 aa4.83□□□□□ -1.64
CHD6-203ENST00000373233 IGF1P05019 195 aa4.83□□□□□ -1.64
CHD6-203ENST00000373233 LINC00846Q9NV44 126 aa4.83□□□□□ -1.64
CHD6-203ENST00000373233 RPL28P46779 137 aaKnown RBP4.83□□□□□ -1.64
CHD6-203ENST00000373233 GPHB5Q86YW7 130 aa4.83□□□□□ -1.64
CHD6-203ENST00000373233 LAMA1P25391 3075 aa4.83□□□□□ -1.64
CHD6-203ENST00000373233 UNC80Q8N2C7 3258 aa4.83□□□□□ -1.64
CHD6-203ENST00000373233 ZFAND2AQ8N6M9 145 aa4.83□□□□□ -1.64
CHD6-203ENST00000373233 SMIM11BQ8TCY0 68 aa4.83□□□□□ -1.64
CHD6-203ENST00000373233 IGLV4-69A0A075B6H9 119 aa4.83□□□□□ -1.64
CHD6-203ENST00000373233 GAS8-AS1O95177 125 aa4.82□□□□□ -1.64
CHD6-203ENST00000373233 UNQ9165/PRO28630Q6UXU0 137 aa4.82□□□□□ -1.64
CHD6-203ENST00000373233 CHD6Q8TD26 2715 aa4.82□□□□□ -1.64
CHD6-203ENST00000373233 K7EMT4 169 aa4.82□□□□□ -1.64
CHD6-203ENST00000373233 CCL24O00175 119 aa4.82□□□□□ -1.64
CHD6-203ENST00000373233 C6orf99Q4VX62 202 aa4.82□□□□□ -1.64
CHD6-203ENST00000373233 DCANP1Q8TF63 244 aa4.82□□□□□ -1.64
CHD6-203ENST00000373233 FHL3Q13643 280 aa4.82□□□□□ -1.64
CHD6-203ENST00000373233 Q8N814 137 aa4.82□□□□□ -1.64
CHD6-203ENST00000373233 LINC01546A6NGU7 62 aa4.82□□□□□ -1.64
CHD6-203ENST00000373233 TSHBP01222 138 aa4.81□□□□□ -1.64
CHD6-203ENST00000373233 PRM2P04554 102 aa4.81□□□□□ -1.64
CHD6-203ENST00000373233 M0QY20 66 aa4.81□□□□□ -1.64
CHD6-203ENST00000373233 SPAG11AQ6PDA7 123 aa4.81□□□□□ -1.64
CHD6-203ENST00000373233 C16orf74Q96GX8 76 aa4.81□□□□□ -1.64
CHD6-203ENST00000373233 FHL2Q14192 279 aa4.81□□□□□ -1.64
CHD6-203ENST00000373233 DEFB1P60022 68 aa4.81□□□□□ -1.64
CHD6-203ENST00000373233 IGHV4-30-4P0DP06 118 aa4.81□□□□□ -1.64
CHD6-203ENST00000373233 ADAMTSL4-AS1Q5T5F5 129 aa4.81□□□□□ -1.64
CHD6-203ENST00000373233 IGKV2D-24A0A075B6R9 120 aa4.81□□□□□ -1.64
CHD6-203ENST00000373233 AVPP01185 164 aa4.81□□□□□ -1.64
CHD6-203ENST00000373233 MRGPRG-AS1Q2M3A8 158 aa4.81□□□□□ -1.64
CHD6-203ENST00000373233 B9D2Q9BPU9 175 aa4.81□□□□□ -1.64
CHD6-203ENST00000373233 A0A096LNJ9 63 aa4.8□□□□□ -1.64
CHD6-203ENST00000373233 CRIP1P50238 77 aa4.8□□□□□ -1.64
CHD6-203ENST00000373233 Q6ZSV7 163 aa4.8□□□□□ -1.64
CHD6-203ENST00000373233 PRR15Q8IV56 129 aa4.8□□□□□ -1.64
CHD6-203ENST00000373233 ZNF702PQ9H963 129 aa4.8□□□□□ -1.64
CHD6-203ENST00000373233 MGAM2Q2M2H8 2515 aa4.8□□□□□ -1.64
CHD6-203ENST00000373233 Q6ZVQ6 151 aa4.79□□□□□ -1.64
CHD6-203ENST00000373233 C10orf99Q6UWK7 81 aa4.79□□□□□ -1.64
CHD6-203ENST00000373233 SBSPONQ8IVN8 264 aa4.79□□□□□ -1.64
CHD6-203ENST00000373233 UBE2D4Q9Y2X8 147 aa4.79□□□□□ -1.64
CHD6-203ENST00000373233 BRI3O95415 125 aa4.79□□□□□ -1.64
CHD6-203ENST00000373233 HIGD2AQ9BW72 106 aa4.78□□□□□ -1.64
CHD6-203ENST00000373233 DHRS4-AS1Q9P1J3 65 aa4.78□□□□□ -1.64
CHD6-203ENST00000373233 IGLV1-40P01703 118 aa4.78□□□□□ -1.64
CHD6-203ENST00000373233 FRYLO94915 3013 aa4.78□□□□□ -1.64
CHD6-203ENST00000373233 SMAD5-AS1Q9Y6J3 95 aa4.78□□□□□ -1.64
CHD6-203ENST00000373233 CCL18P55774 89 aa4.78□□□□□ -1.64
CHD6-203ENST00000373233 VPS13AQ96RL7 3174 aa4.78□□□□□ -1.64
CHD6-203ENST00000373233 C2orf48Q96LS8 159 aa4.78□□□□□ -1.64
CHD6-203ENST00000373233 LY6G6DO95868 133 aa4.77□□□□□ -1.65
CHD6-203ENST00000373233 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.77□□□□□ -1.65
CHD6-203ENST00000373233 PSMG3-AS1Q96PY0 264 aa4.77□□□□□ -1.65
CHD6-203ENST00000373233 Q9UF83 564 aa4.77□□□□□ -1.65
CHD6-203ENST00000373233 CD164L2Q6UWJ8 174 aa4.76□□□□□ -1.65
CHD6-203ENST00000373233 IGIPA6NJ69 53 aa4.76□□□□□ -1.65
CHD6-203ENST00000373233 BCE1O60756 84 aa4.76□□□□□ -1.65
CHD6-203ENST00000373233 CHCHD10Q8WYQ3 142 aaPredicted RBP4.76□□□□□ -1.65
CHD6-203ENST00000373233 RBM12B-AS1Q9P1G2 102 aa4.76□□□□□ -1.65
CHD6-203ENST00000373233 H0Y9P7 68 aa4.76□□□□□ -1.65
CHD6-203ENST00000373233 XAGE1AQ9HD64 81 aa4.76□□□□□ -1.65
CHD6-203ENST00000373233 SMCR5Q8TEV8 140 aa4.76□□□□□ -1.65
CHD6-203ENST00000373233 TRBV6-4A0A1B0GX49 114 aa4.75□□□□□ -1.65
CHD6-203ENST00000373233 ATP11AUNQ6ZP68 121 aa4.75□□□□□ -1.65
CHD6-203ENST00000373233 LINC00474Q9P2X8 69 aa4.75□□□□□ -1.65
CHD6-203ENST00000373233 C10orf25Q5T742 122 aa4.75□□□□□ -1.65
CHD6-203ENST00000373233 hDV103S1A0JD37 113 aa4.75□□□□□ -1.65
CHD6-203ENST00000373233 F8W735 103 aaPredicted RBP4.75□□□□□ -1.65
CHD6-203ENST00000373233 INAFM1C9JVW0 142 aa4.74□□□□□ -1.65
CHD6-203ENST00000373233 PCOTHQ58A44 107 aa4.74□□□□□ -1.65
CHD6-203ENST00000373233 RNASE3P12724 160 aaKnown RBP4.74□□□□□ -1.65
CHD6-203ENST00000373233 COX8CQ7Z4L0 72 aa4.74□□□□□ -1.65
CHD6-203ENST00000373233 ZNF580Q9UK33 172 aa4.74□□□□□ -1.65
CHD6-203ENST00000373233 C9orf66Q5T8R8 295 aa4.74□□□□□ -1.65
CHD6-203ENST00000373233 C11orf21Q9P2W6 132 aa4.74□□□□□ -1.65
CHD6-203ENST00000373233 PRR9Q5T870 116 aa4.74□□□□□ -1.65
CHD6-203ENST00000373233 C18orf65Q6ZTR6 163 aa4.74□□□□□ -1.65
CHD6-203ENST00000373233 LCA10Q71F78 164 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms