RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 IL17DQ8TAD2 202 aa10.42□□□□□ -0.74
COL9A2-202ENST00000372748 IGLV4-60A0A075B6I1 120 aa10.41□□□□□ -0.74
COL9A2-202ENST00000372748 CCL24O00175 119 aa10.41□□□□□ -0.74
COL9A2-202ENST00000372748 PAX4O43316 350 aa10.41□□□□□ -0.74
COL9A2-202ENST00000372748 WFDC10AQ9H1F0 79 aa10.41□□□□□ -0.74
COL9A2-202ENST00000372748 TRGV2A0A075B6R0 118 aa10.4□□□□□ -0.74
COL9A2-202ENST00000372748 LRRC75A-AS1Q8N1F1 130 aa10.4□□□□□ -0.74
COL9A2-202ENST00000372748 ESM1Q9NQ30 184 aa10.4□□□□□ -0.74
COL9A2-202ENST00000372748 A0A1B0GX51 115 aa10.4□□□□□ -0.74
COL9A2-202ENST00000372748 HIST1H4AP62805 103 aaKnown RBP10.4□□□□□ -0.74
COL9A2-202ENST00000372748 ATOX1O00244 68 aa10.4□□□□□ -0.75
COL9A2-202ENST00000372748 RPL18AQ02543 176 aaKnown RBP10.38□□□□□ -0.75
COL9A2-202ENST00000372748 OVOL2Q9BRP0 275 aa10.37□□□□□ -0.75
COL9A2-202ENST00000372748 IGHV3OR16-9A0A0B4J2B5 98 aa10.37□□□□□ -0.75
COL9A2-202ENST00000372748 H0YGX0 51 aa10.37□□□□□ -0.75
COL9A2-202ENST00000372748 CRYGAP11844 174 aa10.37□□□□□ -0.75
COL9A2-202ENST00000372748 RPL35AP18077 110 aaKnown RBP10.37□□□□□ -0.75
COL9A2-202ENST00000372748 FN1P02751 2386 aaKnown RBP10.36□□□□□ -0.75
COL9A2-202ENST00000372748 TRGV4A0A0C4DH28 118 aa10.35□□□□□ -0.75
COL9A2-202ENST00000372748 LINC01561Q8N1V8 128 aa10.35□□□□□ -0.75
COL9A2-202ENST00000372748 TRAV25A0A0B4J276 109 aa10.35□□□□□ -0.75
COL9A2-202ENST00000372748 J3KT08 172 aa10.35□□□□□ -0.75
COL9A2-202ENST00000372748 OBSCN-AS1Q96MR7 158 aa10.35□□□□□ -0.75
COL9A2-202ENST00000372748 FAM19A5Q7Z5A7 132 aaPredicted RBP10.34□□□□□ -0.75
COL9A2-202ENST00000372748 IBA57-AS1B1ANH7 110 aa10.34□□□□□ -0.75
COL9A2-202ENST00000372748 PRR3P79522 188 aaKnown RBP10.34□□□□□ -0.75
COL9A2-202ENST00000372748 Q6JHZ5 121 aa10.34□□□□□ -0.75
COL9A2-202ENST00000372748 TMEM86BQ8N661 226 aa10.34□□□□□ -0.75
COL9A2-202ENST00000372748 GIG44P09565 113 aaPredicted RBP10.33□□□□□ -0.76
COL9A2-202ENST00000372748 OTOGQ6ZRI0 2925 aa10.33□□□□□ -0.76
COL9A2-202ENST00000372748 PLAC8L1A1L4L8 177 aa10.33□□□□□ -0.76
COL9A2-202ENST00000372748 C6orf226Q5I0X4 101 aa10.33□□□□□ -0.76
COL9A2-202ENST00000372748 WFDC9Q8NEX5 89 aa10.33□□□□□ -0.76
COL9A2-202ENST00000372748 KIR2DL5BQ8NHK3 375 aa10.33□□□□□ -0.76
COL9A2-202ENST00000372748 USP17L23D6RBM5 183 aa10.32□□□□□ -0.76
COL9A2-202ENST00000372748 SS18Q15532 418 aa10.32□□□□□ -0.76
COL9A2-202ENST00000372748 TRBV6-8A0A0A6YYG3 113 aa10.32□□□□□ -0.76
COL9A2-202ENST00000372748 A0A087WZ39 114 aa10.32□□□□□ -0.76
COL9A2-202ENST00000372748 XCL1P47992 114 aa10.32□□□□□ -0.76
COL9A2-202ENST00000372748 ORMDL1Q9P0S3 153 aa10.32□□□□□ -0.76
COL9A2-202ENST00000372748 TRBV6-4A0A1B0GX49 114 aa10.31□□□□□ -0.76
COL9A2-202ENST00000372748 HILS1P60008 231 aa10.31□□□□□ -0.76
COL9A2-202ENST00000372748 CLPSL2Q6UWE3 100 aa10.31□□□□□ -0.76
COL9A2-202ENST00000372748 LINC01006Q8NI28 216 aa10.31□□□□□ -0.76
COL9A2-202ENST00000372748 SERP2Q8N6R1 65 aa10.31□□□□□ -0.76
COL9A2-202ENST00000372748 RNASE1P07998 156 aaKnown RBP10.29□□□□□ -0.76
COL9A2-202ENST00000372748 NBEAL2Q6ZNJ1 2754 aa10.29□□□□□ -0.76
COL9A2-202ENST00000372748 HIVEP2P31629 2446 aa10.29□□□□□ -0.76
COL9A2-202ENST00000372748 LINC00959A0A1B0GUT2 108 aa10.28□□□□□ -0.76
COL9A2-202ENST00000372748 C16orf74Q96GX8 76 aa10.28□□□□□ -0.76
COL9A2-202ENST00000372748 DSCR8Q96T75 97 aa10.28□□□□□ -0.76
COL9A2-202ENST00000372748 UPK3BQ9BT76 320 aa10.28□□□□□ -0.76
COL9A2-202ENST00000372748 CCKP06307 115 aa10.27□□□□□ -0.77
COL9A2-202ENST00000372748 FHL2Q14192 279 aa10.27□□□□□ -0.77
COL9A2-202ENST00000372748 DEFB130BP0DP73 79 aa10.26□□□□□ -0.77
COL9A2-202ENST00000372748 DEFB130AP0DP74 79 aa10.26□□□□□ -0.77
COL9A2-202ENST00000372748 TEP1Q99973 2627 aaKnown RBP10.26□□□□□ -0.77
COL9A2-202ENST00000372748 TRAV23DV6A0A075B6W5 121 aa10.25□□□□□ -0.77
COL9A2-202ENST00000372748 LY6G6DO95868 133 aa10.25□□□□□ -0.77
COL9A2-202ENST00000372748 C19orf73Q9NVV2 129 aa10.25□□□□□ -0.77
COL9A2-202ENST00000372748 A0A096LPF7 62 aa10.25□□□□□ -0.77
COL9A2-202ENST00000372748 FAM19A1Q7Z5A9 133 aa10.25□□□□□ -0.77
COL9A2-202ENST00000372748 DPH3Q96FX2 82 aa10.25□□□□□ -0.77
COL9A2-202ENST00000372748 SMIM9A6NGZ8 99 aa10.24□□□□□ -0.77
COL9A2-202ENST00000372748 NANOS2P60321 138 aaKnown RBP10.24□□□□□ -0.77
COL9A2-202ENST00000372748 HIVEP1P15822 2718 aa10.24□□□□□ -0.77
COL9A2-202ENST00000372748 IGLV1-51P01701 117 aa10.24□□□□□ -0.77
COL9A2-202ENST00000372748 KRTAP1-1Q07627 177 aa10.24□□□□□ -0.77
COL9A2-202ENST00000372748 Q8N814 137 aa10.24□□□□□ -0.77
COL9A2-202ENST00000372748 SMR3AQ99954 134 aa10.24□□□□□ -0.77
COL9A2-202ENST00000372748 ANK3Q12955 4377 aaKnown RBP10.23□□□□□ -0.77
COL9A2-202ENST00000372748 TMEM258P61165 79 aa10.23□□□□□ -0.77
COL9A2-202ENST00000372748 ENHOQ6UWT2 76 aa10.23□□□□□ -0.77
COL9A2-202ENST00000372748 CSNK1G2-AS1Q8NCQ2 148 aa10.23□□□□□ -0.77
COL9A2-202ENST00000372748 OXTP01178 125 aa10.23□□□□□ -0.77
COL9A2-202ENST00000372748 RPS28P62857 69 aaKnown RBP10.22□□□□□ -0.77
COL9A2-202ENST00000372748 GHRHP01286 108 aa10.22□□□□□ -0.77
COL9A2-202ENST00000372748 C9orf116Q5BN46 136 aaPredicted RBP10.22□□□□□ -0.77
COL9A2-202ENST00000372748 BAHCC1Q9P281 2608 aa10.2□□□□□ -0.78
COL9A2-202ENST00000372748 JMJD7-PLA2G4BH0Y9G9 81 aa10.2□□□□□ -0.78
COL9A2-202ENST00000372748 GYPEP15421 78 aa10.2□□□□□ -0.78
COL9A2-202ENST00000372748 C5orf47Q569G3 176 aa10.2□□□□□ -0.78
COL9A2-202ENST00000372748 IGLV10-54A0A075B6I4 117 aa10.2□□□□□ -0.78
COL9A2-202ENST00000372748 CMC4P56277 68 aaPredicted RBP10.2□□□□□ -0.78
COL9A2-202ENST00000372748 TMEM256-PLSCR3K7ERE1 68 aa10.19□□□□□ -0.78
COL9A2-202ENST00000372748 C6orf99Q4VX62 202 aa10.19□□□□□ -0.78
COL9A2-202ENST00000372748 Q8IZM0 81 aa10.19□□□□□ -0.78
COL9A2-202ENST00000372748 C16orf95Q9H693 158 aa10.18□□□□□ -0.78
COL9A2-202ENST00000372748 Q8NDZ9 215 aa10.18□□□□□ -0.78
COL9A2-202ENST00000372748 LINC00167Q96N53 147 aa10.18□□□□□ -0.78
COL9A2-202ENST00000372748 Q8N3U1 123 aa10.17□□□□□ -0.78
COL9A2-202ENST00000372748 S100A7L2Q5SY68 101 aa10.17□□□□□ -0.78
COL9A2-202ENST00000372748 F8P00451 2351 aa10.16□□□□□ -0.78
COL9A2-202ENST00000372748 C20orf197Q8N268 126 aa10.16□□□□□ -0.78
COL9A2-202ENST00000372748 LINC00269Q8N2A0 174 aa10.16□□□□□ -0.78
COL9A2-202ENST00000372748 UBL5Q9BZL1 73 aa10.16□□□□□ -0.78
COL9A2-202ENST00000372748 M0R2N4 97 aa10.14□□□□□ -0.79
COL9A2-202ENST00000372748 C4orf26Q17RF5 130 aa10.14□□□□□ -0.79
COL9A2-202ENST00000372748 KRTAP10-3P60369 221 aa10.14□□□□□ -0.79
COL9A2-202ENST00000372748 VWFP04275 2813 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 176.1 ms