RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 C11orf72Q8NBR9 251 aa3.83□□□□□ -1.8
ATG4A-204ENST00000372246 PEMTQ9UBM1 199 aa3.83□□□□□ -1.8
ATG4A-204ENST00000372246 ANKRD17O75179 2603 aaKnown RBP3.83□□□□□ -1.8
ATG4A-204ENST00000372246 TRAV23DV6A0A075B6W5 121 aa3.83□□□□□ -1.8
ATG4A-204ENST00000372246 EPM2AB3EWF7 344 aa3.83□□□□□ -1.8
ATG4A-204ENST00000372246 SND1-IT1Q9HBX3 110 aa3.83□□□□□ -1.8
ATG4A-204ENST00000372246 ACACBO00763 2458 aa3.83□□□□□ -1.8
ATG4A-204ENST00000372246 IGLV4-60A0A075B6I1 120 aa3.82□□□□□ -1.8
ATG4A-204ENST00000372246 IGLV5-39A0A0G2JS06 123 aa3.82□□□□□ -1.8
ATG4A-204ENST00000372246 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
ATG4A-204ENST00000372246 DNAL4O96015 105 aa3.82□□□□□ -1.8
ATG4A-204ENST00000372246 FHL2Q14192 279 aa3.82□□□□□ -1.8
ATG4A-204ENST00000372246 C1orf158Q8N1D5 194 aa3.82□□□□□ -1.8
ATG4A-204ENST00000372246 KRTAP4-7Q9BYR0 210 aa3.82□□□□□ -1.8
ATG4A-204ENST00000372246 A0A096LPF7 62 aa3.82□□□□□ -1.8
ATG4A-204ENST00000372246 B4DSR2 109 aa3.82□□□□□ -1.8
ATG4A-204ENST00000372246 K7EMT4 169 aa3.82□□□□□ -1.8
ATG4A-204ENST00000372246 M0R2N4 97 aa3.82□□□□□ -1.8
ATG4A-204ENST00000372246 GNLYP22749 145 aa3.82□□□□□ -1.8
ATG4A-204ENST00000372246 RPL36AP83881 106 aaKnown RBP3.82□□□□□ -1.8
ATG4A-204ENST00000372246 RPL36ALQ969Q0 106 aaKnown RBP3.82□□□□□ -1.8
ATG4A-204ENST00000372246 IMUPQ9GZP8 106 aa3.82□□□□□ -1.8
ATG4A-204ENST00000372246 PKIGQ9Y2B9 76 aa3.82□□□□□ -1.8
ATG4A-204ENST00000372246 PKD1L2Q7Z442 2459 aa3.81□□□□□ -1.8
ATG4A-204ENST00000372246 FAM236DA0A1B0GTK5 79 aa3.81□□□□□ -1.8
ATG4A-204ENST00000372246 CRPP02741 224 aa3.81□□□□□ -1.8
ATG4A-204ENST00000372246 FAM236CP0DP71 79 aa3.81□□□□□ -1.8
ATG4A-204ENST00000372246 RPL28P46779 137 aaKnown RBP3.81□□□□□ -1.8
ATG4A-204ENST00000372246 CCL18P55774 89 aa3.81□□□□□ -1.8
ATG4A-204ENST00000372246 MTORP42345 2549 aa3.81□□□□□ -1.8
ATG4A-204ENST00000372246 VWFP04275 2813 aa3.81□□□□□ -1.8
ATG4A-204ENST00000372246 IGLV5-45A0A087WSX0 123 aa3.81□□□□□ -1.8
ATG4A-204ENST00000372246 SS18Q15532 418 aa3.81□□□□□ -1.8
ATG4A-204ENST00000372246 HIST2H2BCQ6DN03 193 aa3.81□□□□□ -1.8
ATG4A-204ENST00000372246 NOP10Q9NPE3 64 aaKnown RBP3.81□□□□□ -1.8
ATG4A-204ENST00000372246 USP17L23D6RBM5 183 aa3.8□□□□□ -1.8
ATG4A-204ENST00000372246 TIMM17BO60830 172 aa3.8□□□□□ -1.8
ATG4A-204ENST00000372246 TRACP01848 142 aa3.8□□□□□ -1.8
ATG4A-204ENST00000372246 MSMBP08118 114 aa3.8□□□□□ -1.8
ATG4A-204ENST00000372246 STHQ8IWL8 128 aa3.8□□□□□ -1.8
ATG4A-204ENST00000372246 MAP6D1Q9H9H5 199 aa3.8□□□□□ -1.8
ATG4A-204ENST00000372246 CDC42SE2Q9NRR3 84 aa3.8□□□□□ -1.8
ATG4A-204ENST00000372246 IGSF10Q6WRI0 2623 aa3.8□□□□□ -1.8
ATG4A-204ENST00000372246 ACYP1P07311 99 aa3.8□□□□□ -1.8
ATG4A-204ENST00000372246 RPL18AQ02543 176 aaKnown RBP3.8□□□□□ -1.8
ATG4A-204ENST00000372246 CD164Q04900 197 aa3.8□□□□□ -1.8
ATG4A-204ENST00000372246 C9orf116Q5BN46 136 aaPredicted RBP3.8□□□□□ -1.8
ATG4A-204ENST00000372246 ENHOQ6UWT2 76 aa3.8□□□□□ -1.8
ATG4A-204ENST00000372246 UPK3BQ9BT76 320 aa3.8□□□□□ -1.8
ATG4A-204ENST00000372246 ACANP16112 2415 aa3.79□□□□□ -1.8
ATG4A-204ENST00000372246 Q8NDZ9 215 aa3.79□□□□□ -1.8
ATG4A-204ENST00000372246 IL17DQ8TAD2 202 aa3.79□□□□□ -1.8
ATG4A-204ENST00000372246 CCL19Q99731 98 aa3.79□□□□□ -1.8
ATG4A-204ENST00000372246 H3BUA1 57 aa3.79□□□□□ -1.8
ATG4A-204ENST00000372246 XCL1P47992 114 aa3.79□□□□□ -1.8
ATG4A-204ENST00000372246 C20orf197Q8N268 126 aa3.79□□□□□ -1.8
ATG4A-204ENST00000372246 WFDC11Q8NEX6 87 aa3.79□□□□□ -1.8
ATG4A-204ENST00000372246 COX7B2Q8TF08 81 aa3.79□□□□□ -1.8
ATG4A-204ENST00000372246 ODF3L2Q3SX64 289 aa3.78□□□□□ -1.8
ATG4A-204ENST00000372246 SCXQ7RTU7 201 aa3.78□□□□□ -1.8
ATG4A-204ENST00000372246 ESM1Q9NQ30 184 aa3.78□□□□□ -1.8
ATG4A-204ENST00000372246 PDZD2O15018 2839 aa3.78□□□□□ -1.8
ATG4A-204ENST00000372246 KMT2BQ9UMN6 2715 aaPredicted RBP3.78□□□□□ -1.8
ATG4A-204ENST00000372246 IGLV10-54A0A075B6I4 117 aa3.78□□□□□ -1.8
ATG4A-204ENST00000372246 A0A096LNT2 108 aa3.78□□□□□ -1.8
ATG4A-204ENST00000372246 UBE2L6O14933 153 aa3.78□□□□□ -1.8
ATG4A-204ENST00000372246 ZNF702PQ9H963 129 aa3.78□□□□□ -1.8
ATG4A-204ENST00000372246 SNURFQ9Y675 71 aa3.78□□□□□ -1.8
ATG4A-204ENST00000372246 K7EQD1 137 aa3.77□□□□□ -1.81
ATG4A-204ENST00000372246 ATOX1O00244 68 aa3.77□□□□□ -1.81
ATG4A-204ENST00000372246 INAFM2P0DMQ5 153 aa3.77□□□□□ -1.81
ATG4A-204ENST00000372246 DYNLRB2Q8TF09 96 aa3.77□□□□□ -1.81
ATG4A-204ENST00000372246 C16orf95Q9H693 158 aa3.77□□□□□ -1.81
ATG4A-204ENST00000372246 PLA2G2DQ9UNK4 145 aa3.77□□□□□ -1.81
ATG4A-204ENST00000372246 TRGV2A0A075B6R0 118 aa3.77□□□□□ -1.81
ATG4A-204ENST00000372246 NDUFC2-KCTD14E9PQ53 114 aa3.77□□□□□ -1.81
ATG4A-204ENST00000372246 INSP01308 110 aa3.77□□□□□ -1.81
ATG4A-204ENST00000372246 SERP2Q8N6R1 65 aa3.77□□□□□ -1.81
ATG4A-204ENST00000372246 RETNQ9HD89 108 aa3.77□□□□□ -1.81
ATG4A-204ENST00000372246 ITPR3Q14573 2671 aa3.77□□□□□ -1.81
ATG4A-204ENST00000372246 DOPEY1Q5JWR5 2465 aa3.76□□□□□ -1.81
ATG4A-204ENST00000372246 TRAV13-2A0A0B4J235 113 aa3.76□□□□□ -1.81
ATG4A-204ENST00000372246 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
ATG4A-204ENST00000372246 ZNF462Q96JM2 2506 aa3.76□□□□□ -1.81
ATG4A-204ENST00000372246 PKD1L1Q8TDX9 2849 aa3.76□□□□□ -1.81
ATG4A-204ENST00000372246 CR1P17927 2039 aa3.76□□□□□ -1.81
ATG4A-204ENST00000372246 TRAV10A0A0B4J240 114 aa3.76□□□□□ -1.81
ATG4A-204ENST00000372246 DEFB130BP0DP73 79 aa3.76□□□□□ -1.81
ATG4A-204ENST00000372246 DEFB130AP0DP74 79 aa3.76□□□□□ -1.81
ATG4A-204ENST00000372246 NANOS2P60321 138 aaKnown RBP3.76□□□□□ -1.81
ATG4A-204ENST00000372246 TMEM243Q9BU79 118 aa3.76□□□□□ -1.81
ATG4A-204ENST00000372246 NDUFC2O95298 119 aa3.75□□□□□ -1.81
ATG4A-204ENST00000372246 DEFB114Q30KQ6 69 aa3.75□□□□□ -1.81
ATG4A-204ENST00000372246 FAM222AQ5U5X8 452 aa3.75□□□□□ -1.81
ATG4A-204ENST00000372246 IGHV3OR16-9A0A0B4J2B5 98 aa3.75□□□□□ -1.81
ATG4A-204ENST00000372246 DEFB4AO15263 64 aa3.75□□□□□ -1.81
ATG4A-204ENST00000372246 GIG44P09565 113 aaPredicted RBP3.75□□□□□ -1.81
ATG4A-204ENST00000372246 Q6JHZ5 121 aa3.75□□□□□ -1.81
ATG4A-204ENST00000372246 RMI2Q96E14 147 aa3.75□□□□□ -1.81
ATG4A-204ENST00000372246 LINC00474Q9P2X8 69 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms