RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 F5H768 121 aa8.09□□□□□ -1.11
TSPAN1-201ENST00000372003 HTN1P15515 57 aa8.09□□□□□ -1.11
TSPAN1-201ENST00000372003 RPL36AP83881 106 aaKnown RBP8.09□□□□□ -1.11
TSPAN1-201ENST00000372003 RPL36ALQ969Q0 106 aaKnown RBP8.09□□□□□ -1.11
TSPAN1-201ENST00000372003 RPL35AP18077 110 aaKnown RBP8.08□□□□□ -1.12
TSPAN1-201ENST00000372003 IL17DQ8TAD2 202 aa8.08□□□□□ -1.12
TSPAN1-201ENST00000372003 SMCR5Q8TEV8 140 aa8.08□□□□□ -1.12
TSPAN1-201ENST00000372003 Q9UF83 564 aa8.08□□□□□ -1.12
TSPAN1-201ENST00000372003 FBN3Q75N90 2809 aa8.08□□□□□ -1.12
TSPAN1-201ENST00000372003 SORL1Q92673 2214 aa8.08□□□□□ -1.12
TSPAN1-201ENST00000372003 IGHV3-38A0A0C4DH36 116 aa8.07□□□□□ -1.12
TSPAN1-201ENST00000372003 H0YGX0 51 aa8.07□□□□□ -1.12
TSPAN1-201ENST00000372003 MALP21145 153 aa8.07□□□□□ -1.12
TSPAN1-201ENST00000372003 HIST1H4AP62805 103 aaKnown RBP8.07□□□□□ -1.12
TSPAN1-201ENST00000372003 C9orf153Q5TBE3 101 aa8.07□□□□□ -1.12
TSPAN1-201ENST00000372003 STHQ8IWL8 128 aa8.07□□□□□ -1.12
TSPAN1-201ENST00000372003 CDC42SE2Q9NRR3 84 aa8.07□□□□□ -1.12
TSPAN1-201ENST00000372003 ATOX1O00244 68 aa8.07□□□□□ -1.12
TSPAN1-201ENST00000372003 COX7CP15954 63 aa8.07□□□□□ -1.12
TSPAN1-201ENST00000372003 C22orf24Q9Y442 160 aa8.07□□□□□ -1.12
TSPAN1-201ENST00000372003 DNAH3Q8TD57 4116 aa8.06□□□□□ -1.12
TSPAN1-201ENST00000372003 A0A1B0GX51 115 aa8.06□□□□□ -1.12
TSPAN1-201ENST00000372003 K7EQD1 137 aa8.06□□□□□ -1.12
TSPAN1-201ENST00000372003 CRPP02741 224 aa8.06□□□□□ -1.12
TSPAN1-201ENST00000372003 OBSCN-AS1Q96MR7 158 aa8.05□□□□□ -1.12
TSPAN1-201ENST00000372003 CRYGAP11844 174 aa8.04□□□□□ -1.12
TSPAN1-201ENST00000372003 LINC00694P0DN24 101 aa8.03□□□□□ -1.12
TSPAN1-201ENST00000372003 Q6JHZ5 121 aa8.03□□□□□ -1.12
TSPAN1-201ENST00000372003 FAM218AQ96MZ4 157 aa8.03□□□□□ -1.12
TSPAN1-201ENST00000372003 TRAV13-1A0A0B4J241 112 aa8.03□□□□□ -1.12
TSPAN1-201ENST00000372003 DNAL4O96015 105 aa8.03□□□□□ -1.12
TSPAN1-201ENST00000372003 RPS28P62857 69 aaKnown RBP8.03□□□□□ -1.12
TSPAN1-201ENST00000372003 NTM-AS1Q6ZSK4 140 aa8.03□□□□□ -1.12
TSPAN1-201ENST00000372003 B9D2Q9BPU9 175 aa8.03□□□□□ -1.12
TSPAN1-201ENST00000372003 TMEM243Q9BU79 118 aa8.03□□□□□ -1.12
TSPAN1-201ENST00000372003 APOC4P55056 127 aa8.02□□□□□ -1.13
TSPAN1-201ENST00000372003 GAGE2AQ6NT46 116 aa8.02□□□□□ -1.13
TSPAN1-201ENST00000372003 COX7B2Q8TF08 81 aa8.02□□□□□ -1.13
TSPAN1-201ENST00000372003 C2orf48Q96LS8 159 aa8.02□□□□□ -1.13
TSPAN1-201ENST00000372003 SND1-IT1Q9HBX3 110 aa8.02□□□□□ -1.13
TSPAN1-201ENST00000372003 IBA57-AS1B1ANH7 110 aa8.01□□□□□ -1.13
TSPAN1-201ENST00000372003 UBE2L6O14933 153 aa8.01□□□□□ -1.13
TSPAN1-201ENST00000372003 PRM2P04554 102 aa8.01□□□□□ -1.13
TSPAN1-201ENST00000372003 A0A0U1RRA0 63 aa8□□□□□ -1.13
TSPAN1-201ENST00000372003 C1orf158Q8N1D5 194 aa8□□□□□ -1.13
TSPAN1-201ENST00000372003 RETNQ9HD89 108 aa8□□□□□ -1.13
TSPAN1-201ENST00000372003 XCL2Q9UBD3 114 aa8□□□□□ -1.13
TSPAN1-201ENST00000372003 KLK5Q9Y337 293 aaPredicted RBP8□□□□□ -1.13
TSPAN1-201ENST00000372003 TRGV1A0A0A0MS02 117 aa8□□□□□ -1.13
TSPAN1-201ENST00000372003 J3KT08 172 aa8□□□□□ -1.13
TSPAN1-201ENST00000372003 RPL18AQ02543 176 aaKnown RBP8□□□□□ -1.13
TSPAN1-201ENST00000372003 DEFB135Q30KP9 77 aa8□□□□□ -1.13
TSPAN1-201ENST00000372003 LINC00337Q8N6G1 96 aa8□□□□□ -1.13
TSPAN1-201ENST00000372003 KIR2DL5BQ8NHK3 375 aa8□□□□□ -1.13
TSPAN1-201ENST00000372003 IGKV2-28A0A075B6P5 120 aa7.99□□□□□ -1.13
TSPAN1-201ENST00000372003 IGKV2D-28P01615 120 aa7.99□□□□□ -1.13
TSPAN1-201ENST00000372003 GIG44P09565 113 aaPredicted RBP7.99□□□□□ -1.13
TSPAN1-201ENST00000372003 MIR7-3HGQ8N6C7 128 aa7.99□□□□□ -1.13
TSPAN1-201ENST00000372003 SMIM11BQ8TCY0 68 aa7.99□□□□□ -1.13
TSPAN1-201ENST00000372003 TRBV6-4A0A1B0GX49 114 aa7.98□□□□□ -1.13
TSPAN1-201ENST00000372003 S100A7L2Q5SY68 101 aa7.98□□□□□ -1.13
TSPAN1-201ENST00000372003 TM2D3Q9BRN9 247 aa7.97□□□□□ -1.13
TSPAN1-201ENST00000372003 Q9HAA7 133 aa7.97□□□□□ -1.13
TSPAN1-201ENST00000372003 ATP5EP2Q5VTU8 51 aa7.96□□□□□ -1.13
TSPAN1-201ENST00000372003 A0A087WZ39 114 aa7.96□□□□□ -1.14
TSPAN1-201ENST00000372003 CCL18P55774 89 aa7.96□□□□□ -1.14
TSPAN1-201ENST00000372003 LINC00158P58513 81 aa7.96□□□□□ -1.14
TSPAN1-201ENST00000372003 TMEM258P61165 79 aa7.96□□□□□ -1.14
TSPAN1-201ENST00000372003 LINC01561Q8N1V8 128 aa7.96□□□□□ -1.14
TSPAN1-201ENST00000372003 SERP2Q8N6R1 65 aa7.96□□□□□ -1.14
TSPAN1-201ENST00000372003 C16orf74Q96GX8 76 aa7.96□□□□□ -1.14
TSPAN1-201ENST00000372003 LINC00167Q96N53 147 aa7.96□□□□□ -1.14
TSPAN1-201ENST00000372003 A0A087WYN8 130 aa7.95□□□□□ -1.14
TSPAN1-201ENST00000372003 IGHV3OR16-9A0A0B4J2B5 98 aa7.95□□□□□ -1.14
TSPAN1-201ENST00000372003 Q6ZTI0 123 aa7.95□□□□□ -1.14
TSPAN1-201ENST00000372003 CSNK1G2-AS1Q8NCQ2 148 aa7.95□□□□□ -1.14
TSPAN1-201ENST00000372003 JMJD7-PLA2G4BH0Y9G9 81 aa7.94□□□□□ -1.14
TSPAN1-201ENST00000372003 ORMDL1Q9P0S3 153 aa7.94□□□□□ -1.14
TSPAN1-201ENST00000372003 C14orf132Q9NPU4 83 aa7.93□□□□□ -1.14
TSPAN1-201ENST00000372003 PRKDCP78527 4128 aaKnown RBP7.93□□□□□ -1.14
TSPAN1-201ENST00000372003 CCKP06307 115 aa7.92□□□□□ -1.14
TSPAN1-201ENST00000372003 LINC00846Q9NV44 126 aa7.92□□□□□ -1.14
TSPAN1-201ENST00000372003 LECT2O14960 151 aa7.92□□□□□ -1.14
TSPAN1-201ENST00000372003 NBEAL2Q6ZNJ1 2754 aa7.92□□□□□ -1.14
TSPAN1-201ENST00000372003 TRBV6-8A0A0A6YYG3 113 aa7.91□□□□□ -1.14
TSPAN1-201ENST00000372003 TRBV10-3A0A0K0K1G6 114 aa7.91□□□□□ -1.14
TSPAN1-201ENST00000372003 DEFB4AO15263 64 aa7.91□□□□□ -1.14
TSPAN1-201ENST00000372003 C5orf47Q569G3 176 aa7.91□□□□□ -1.14
TSPAN1-201ENST00000372003 OR13C6PQ8NH95 151 aa7.91□□□□□ -1.14
TSPAN1-201ENST00000372003 UPK3BQ9BT76 320 aa7.91□□□□□ -1.14
TSPAN1-201ENST00000372003 TOMM7Q9P0U1 55 aa7.91□□□□□ -1.14
TSPAN1-201ENST00000372003 X6R8D5 127 aa7.91□□□□□ -1.14
TSPAN1-201ENST00000372003 NDUFC2-KCTD14E9PQ53 114 aa7.9□□□□□ -1.14
TSPAN1-201ENST00000372003 PAX4O43316 350 aa7.9□□□□□ -1.14
TSPAN1-201ENST00000372003 BCE1O60756 84 aa7.9□□□□□ -1.14
TSPAN1-201ENST00000372003 NDUFC2O95298 119 aa7.9□□□□□ -1.14
TSPAN1-201ENST00000372003 hADV29S1A0JD25 119 aa7.89□□□□□ -1.15
TSPAN1-201ENST00000372003 PLAC8L1A1L4L8 177 aa7.89□□□□□ -1.15
TSPAN1-201ENST00000372003 LYPD5Q6UWN5 251 aa7.89□□□□□ -1.15
TSPAN1-201ENST00000372003 Q8IZM0 81 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms