RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 C10orf99Q6UWK7 81 aa8.5□□□□□ -1.05
PTPN1-201ENST00000371621 IGFL2Q6UWQ7 119 aa8.5□□□□□ -1.05
PTPN1-201ENST00000371621 TRAV10A0A0B4J240 114 aa8.5□□□□□ -1.05
PTPN1-201ENST00000371621 DEFB121Q5J5C9 76 aa8.5□□□□□ -1.05
PTPN1-201ENST00000371621 CENPEQ02224 2701 aa8.5□□□□□ -1.05
PTPN1-201ENST00000371621 PLA2G2CQ5R387 149 aa8.5□□□□□ -1.05
PTPN1-201ENST00000371621 C9orf129Q5T035 196 aaKnown RBP8.5□□□□□ -1.05
PTPN1-201ENST00000371621 Q6ZSN1 163 aa8.5□□□□□ -1.05
PTPN1-201ENST00000371621 SPENQ96T58 3664 aaKnown RBP8.49□□□□□ -1.05
PTPN1-201ENST00000371621 IGFL3Q6UXB1 125 aa8.49□□□□□ -1.05
PTPN1-201ENST00000371621 XAGE1AQ9HD64 81 aa8.49□□□□□ -1.05
PTPN1-201ENST00000371621 IGHV4-59P01825 116 aa8.49□□□□□ -1.05
PTPN1-201ENST00000371621 ZNF843Q8N446 348 aa8.49□□□□□ -1.05
PTPN1-201ENST00000371621 CHCHD7Q9BUK0 85 aa8.49□□□□□ -1.05
PTPN1-201ENST00000371621 LRRK2Q5S007 2527 aa8.48□□□□□ -1.05
PTPN1-201ENST00000371621 A6NED7 52 aa8.48□□□□□ -1.05
PTPN1-201ENST00000371621 IBA57-AS1B1ANH7 110 aa8.48□□□□□ -1.05
PTPN1-201ENST00000371621 LINC01547P58512 204 aaPredicted RBP8.48□□□□□ -1.05
PTPN1-201ENST00000371621 ESRGQ1W209 222 aa8.48□□□□□ -1.05
PTPN1-201ENST00000371621 TM2D3Q9BRN9 247 aa8.47□□□□□ -1.05
PTPN1-201ENST00000371621 Q8N814 137 aa8.47□□□□□ -1.05
PTPN1-201ENST00000371621 LOC100131303A0A0U1RQF7 123 aa8.46□□□□□ -1.05
PTPN1-201ENST00000371621 ATP5EP56381 51 aaPredicted RBP8.46□□□□□ -1.05
PTPN1-201ENST00000371621 Q6ZVQ6 151 aa8.46□□□□□ -1.05
PTPN1-201ENST00000371621 RNF223E7ERA6 249 aa8.46□□□□□ -1.05
PTPN1-201ENST00000371621 ZNF561-AS1K7EIQ3 104 aa8.46□□□□□ -1.05
PTPN1-201ENST00000371621 ZZEF1O43149 2961 aa8.46□□□□□ -1.06
PTPN1-201ENST00000371621 ZNF292O60281 2723 aa8.46□□□□□ -1.06
PTPN1-201ENST00000371621 C9orf116Q5BN46 136 aaPredicted RBP8.46□□□□□ -1.06
PTPN1-201ENST00000371621 C1orf158Q8N1D5 194 aa8.46□□□□□ -1.06
PTPN1-201ENST00000371621 OXTP01178 125 aa8.45□□□□□ -1.06
PTPN1-201ENST00000371621 PRYO14603 147 aa8.45□□□□□ -1.06
PTPN1-201ENST00000371621 Q5XG85 94 aa8.45□□□□□ -1.06
PTPN1-201ENST00000371621 K7EQG2 157 aa8.45□□□□□ -1.06
PTPN1-201ENST00000371621 GYPEP15421 78 aa8.45□□□□□ -1.06
PTPN1-201ENST00000371621 MP68P56378 58 aa8.45□□□□□ -1.06
PTPN1-201ENST00000371621 DIRC1Q969H9 104 aa8.45□□□□□ -1.06
PTPN1-201ENST00000371621 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.44□□□□□ -1.06
PTPN1-201ENST00000371621 A0A0J9YWU9 116 aa8.44□□□□□ -1.06
PTPN1-201ENST00000371621 H3BUA1 57 aa8.44□□□□□ -1.06
PTPN1-201ENST00000371621 PDE6GP18545 87 aa8.44□□□□□ -1.06
PTPN1-201ENST00000371621 CDC42SE2Q9NRR3 84 aa8.44□□□□□ -1.06
PTPN1-201ENST00000371621 K7EMT4 169 aa8.43□□□□□ -1.06
PTPN1-201ENST00000371621 MSMBP08118 114 aa8.43□□□□□ -1.06
PTPN1-201ENST00000371621 Q8N6K4 173 aa8.43□□□□□ -1.06
PTPN1-201ENST00000371621 HIGD2AQ9BW72 106 aa8.43□□□□□ -1.06
PTPN1-201ENST00000371621 TRBV6-4A0A1B0GX49 114 aa8.43□□□□□ -1.06
PTPN1-201ENST00000371621 ZNF575Q86XF7 245 aa8.43□□□□□ -1.06
PTPN1-201ENST00000371621 B4DSR2 109 aa8.42□□□□□ -1.06
PTPN1-201ENST00000371621 IGHV4-61A0A0C4DH41 118 aa8.42□□□□□ -1.06
PTPN1-201ENST00000371621 H7BZZ5 65 aa8.42□□□□□ -1.06
PTPN1-201ENST00000371621 CDSNQ15517 529 aa8.42□□□□□ -1.06
PTPN1-201ENST00000371621 LINC00482Q8N8I6 264 aa8.42□□□□□ -1.06
PTPN1-201ENST00000371621 DEFB112Q30KQ8 113 aa8.42□□□□□ -1.06
PTPN1-201ENST00000371621 EPG5Q9HCE0 2579 aa8.41□□□□□ -1.06
PTPN1-201ENST00000371621 NKAPP1Q8N9T2 125 aa8.41□□□□□ -1.06
PTPN1-201ENST00000371621 ASH1LQ9NR48 2969 aaKnown RBP8.41□□□□□ -1.06
PTPN1-201ENST00000371621 SPAG11BQ08648 103 aa8.4□□□□□ -1.06
PTPN1-201ENST00000371621 COX7BP24311 80 aa8.39□□□□□ -1.07
PTPN1-201ENST00000371621 C11orf72Q8NBR9 251 aa8.39□□□□□ -1.07
PTPN1-201ENST00000371621 IGLV4-60A0A075B6I1 120 aa8.38□□□□□ -1.07
PTPN1-201ENST00000371621 DEFB4AO15263 64 aa8.38□□□□□ -1.07
PTPN1-201ENST00000371621 WFDC10BQ8IUB3 73 aa8.38□□□□□ -1.07
PTPN1-201ENST00000371621 WFDC13Q8IUB5 93 aa8.38□□□□□ -1.07
PTPN1-201ENST00000371621 PRR15LQ9BU68 103 aa8.38□□□□□ -1.07
PTPN1-201ENST00000371621 IGKV2-28A0A075B6P5 120 aa8.37□□□□□ -1.07
PTPN1-201ENST00000371621 IGKV2D-28P01615 120 aa8.37□□□□□ -1.07
PTPN1-201ENST00000371621 IGLV5-39A0A0G2JS06 123 aa8.36□□□□□ -1.07
PTPN1-201ENST00000371621 CAMK2N2Q96S95 79 aa8.36□□□□□ -1.07
PTPN1-201ENST00000371621 KLK12Q9UKR0 248 aa8.36□□□□□ -1.07
PTPN1-201ENST00000371621 DEFB116Q30KQ4 102 aa8.35□□□□□ -1.07
PTPN1-201ENST00000371621 LRBAP50851 2863 aa8.35□□□□□ -1.07
PTPN1-201ENST00000371621 IGHV4-30-2A0A087WSY4 118 aa8.35□□□□□ -1.07
PTPN1-201ENST00000371621 MAP6D1Q9H9H5 199 aa8.35□□□□□ -1.07
PTPN1-201ENST00000371621 DNAJC9-AS1A6NH13 148 aa8.35□□□□□ -1.07
PTPN1-201ENST00000371621 LMO4P61968 165 aa8.35□□□□□ -1.07
PTPN1-201ENST00000371621 BEAN1Q3B7T3 259 aa8.35□□□□□ -1.07
PTPN1-201ENST00000371621 SVEP1Q4LDE5 3571 aa8.34□□□□□ -1.07
PTPN1-201ENST00000371621 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.34□□□□□ -1.07
PTPN1-201ENST00000371621 TRBV6-8A0A0A6YYG3 113 aa8.34□□□□□ -1.07
PTPN1-201ENST00000371621 NDUFS5O43920 106 aa8.34□□□□□ -1.07
PTPN1-201ENST00000371621 Q96MF0 132 aa8.34□□□□□ -1.07
PTPN1-201ENST00000371621 UBE2BP63146 152 aa8.34□□□□□ -1.07
PTPN1-201ENST00000371621 LINC00575Q6W349 94 aa8.33□□□□□ -1.08
PTPN1-201ENST00000371621 LINC00959A0A1B0GUT2 108 aa8.33□□□□□ -1.08
PTPN1-201ENST00000371621 CHCHD10Q8WYQ3 142 aaPredicted RBP8.33□□□□□ -1.08
PTPN1-201ENST00000371621 CHD6Q8TD26 2715 aa8.33□□□□□ -1.08
PTPN1-201ENST00000371621 MUC7Q8TAX7 377 aa8.32□□□□□ -1.08
PTPN1-201ENST00000371621 TRBV10-3A0A0K0K1G6 114 aa8.32□□□□□ -1.08
PTPN1-201ENST00000371621 Q8NA96 180 aa8.32□□□□□ -1.08
PTPN1-201ENST00000371621 LINC00208Q96KT6 92 aa8.32□□□□□ -1.08
PTPN1-201ENST00000371621 CSMD1Q96PZ7 3565 aa8.32□□□□□ -1.08
PTPN1-201ENST00000371621 A6NDX4 124 aa8.31□□□□□ -1.08
PTPN1-201ENST00000371621 PLAC8L1A1L4L8 177 aa8.31□□□□□ -1.08
PTPN1-201ENST00000371621 UNQ6190/PRO20217Q6UXQ8 127 aa8.31□□□□□ -1.08
PTPN1-201ENST00000371621 USP24Q9UPU5 2620 aa8.31□□□□□ -1.08
PTPN1-201ENST00000371621 A8MUN3 132 aa8.3□□□□□ -1.08
PTPN1-201ENST00000371621 FP248Q71RG6 208 aaPredicted RBP8.3□□□□□ -1.08
PTPN1-201ENST00000371621 ETDCA0A1B0GVM5 59 aa8.29□□□□□ -1.08
PTPN1-201ENST00000371621 KLKP1Q107X0 134 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms