RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 IGHV1-58A0A0C4DH39 117 aa10.52□□□□□ -0.73
PFDN4-201ENST00000371419 LINC00959A0A1B0GUT2 108 aa10.52□□□□□ -0.73
PFDN4-201ENST00000371419 LECT2O14960 151 aa10.52□□□□□ -0.73
PFDN4-201ENST00000371419 GCSHP23434 173 aa10.52□□□□□ -0.73
PFDN4-201ENST00000371419 WFDC2Q14508 124 aa10.52□□□□□ -0.73
PFDN4-201ENST00000371419 LINC00469Q8N7U9 141 aa10.52□□□□□ -0.73
PFDN4-201ENST00000371419 CHCHD10Q8WYQ3 142 aaPredicted RBP10.52□□□□□ -0.73
PFDN4-201ENST00000371419 SS18Q15532 418 aa10.51□□□□□ -0.73
PFDN4-201ENST00000371419 Q8N814 137 aa10.51□□□□□ -0.73
PFDN4-201ENST00000371419 GAGE12HA6NDE8 117 aa10.5□□□□□ -0.73
PFDN4-201ENST00000371419 TAX1BP3O14907 124 aa10.5□□□□□ -0.73
PFDN4-201ENST00000371419 PTTG1IPP53801 180 aa10.5□□□□□ -0.73
PFDN4-201ENST00000371419 TSPEAR-AS2P59090 65 aa10.5□□□□□ -0.73
PFDN4-201ENST00000371419 KRTAP10-2P60368 255 aa10.5□□□□□ -0.73
PFDN4-201ENST00000371419 CCL25O15444 150 aa10.49□□□□□ -0.73
PFDN4-201ENST00000371419 LINC00242Q5T6M2 205 aa10.49□□□□□ -0.73
PFDN4-201ENST00000371419 SPANXB1Q9NS25 103 aaPredicted RBP10.49□□□□□ -0.73
PFDN4-201ENST00000371419 PGPEP1Q9NXJ5 209 aa10.49□□□□□ -0.73
PFDN4-201ENST00000371419 TRAV13-1A0A0B4J241 112 aa10.49□□□□□ -0.73
PFDN4-201ENST00000371419 SMIM13P0DJ93 91 aa10.49□□□□□ -0.73
PFDN4-201ENST00000371419 XCL1P47992 114 aa10.49□□□□□ -0.73
PFDN4-201ENST00000371419 IGHV3-64A0A075B6Q5 118 aa10.48□□□□□ -0.73
PFDN4-201ENST00000371419 USP17L23D6RBM5 183 aa10.48□□□□□ -0.73
PFDN4-201ENST00000371419 SRSF9Q13242 221 aaKnown RBP eCLIP10.48□□□□□ -0.73
PFDN4-201ENST00000371419 C14orf177Q52M58 125 aa10.48□□□□□ -0.73
PFDN4-201ENST00000371419 CDKN2A-AS1Q9UH64 79 aa10.48□□□□□ -0.73
PFDN4-201ENST00000371419 SPINK8P0C7L1 97 aa10.47□□□□□ -0.73
PFDN4-201ENST00000371419 FXYD2P54710 66 aa10.47□□□□□ -0.73
PFDN4-201ENST00000371419 NTN5Q8WTR8 489 aaPredicted RBP10.47□□□□□ -0.73
PFDN4-201ENST00000371419 TMEM238LA0A1B0GVL6 79 aa10.46□□□□□ -0.74
PFDN4-201ENST00000371419 A6NJY4 79 aa10.46□□□□□ -0.74
PFDN4-201ENST00000371419 C16orf90A8MZG2 172 aa10.46□□□□□ -0.74
PFDN4-201ENST00000371419 COX6A2Q02221 97 aa10.46□□□□□ -0.74
PFDN4-201ENST00000371419 FOXI1Q12951 378 aa10.46□□□□□ -0.74
PFDN4-201ENST00000371419 CD164L2Q6UWJ8 174 aa10.46□□□□□ -0.74
PFDN4-201ENST00000371419 FUSP35637 526 aaKnown RBP eCLIP10.45□□□□□ -0.74
PFDN4-201ENST00000371419 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.44□□□□□ -0.74
PFDN4-201ENST00000371419 IGLV5-52A0A0A0MRZ9 124 aa10.44□□□□□ -0.74
PFDN4-201ENST00000371419 CFAP161Q6P656 301 aa10.44□□□□□ -0.74
PFDN4-201ENST00000371419 NDUFA12Q9UI09 145 aa10.44□□□□□ -0.74
PFDN4-201ENST00000371419 IGLV5-39A0A0G2JS06 123 aa10.43□□□□□ -0.74
PFDN4-201ENST00000371419 C9orf118A6NHY6 69 aa10.43□□□□□ -0.74
PFDN4-201ENST00000371419 TMEM238C9JI98 176 aa10.43□□□□□ -0.74
PFDN4-201ENST00000371419 DYNC1H1Q14204 4646 aaKnown RBP10.43□□□□□ -0.74
PFDN4-201ENST00000371419 DNAH5Q8TE73 4624 aa10.43□□□□□ -0.74
PFDN4-201ENST00000371419 A0A0J9YXY3 114 aa10.42□□□□□ -0.74
PFDN4-201ENST00000371419 NHP2Q9NX24 153 aaKnown RBP10.42□□□□□ -0.74
PFDN4-201ENST00000371419 Q6ZVH6 145 aa10.42□□□□□ -0.74
PFDN4-201ENST00000371419 A0A1B0GWB2 263 aa10.41□□□□□ -0.74
PFDN4-201ENST00000371419 SMIM1B2RUZ4 78 aa10.41□□□□□ -0.74
PFDN4-201ENST00000371419 J3QL48 77 aa10.41□□□□□ -0.74
PFDN4-201ENST00000371419 COX7A2LO14548 114 aa10.41□□□□□ -0.74
PFDN4-201ENST00000371419 NDUFA1O15239 70 aa10.41□□□□□ -0.74
PFDN4-201ENST00000371419 VAMP3Q15836 100 aa10.41□□□□□ -0.74
PFDN4-201ENST00000371419 C15orf56Q8N910 161 aa10.41□□□□□ -0.74
PFDN4-201ENST00000371419 TIMM17BO60830 172 aa10.4□□□□□ -0.74
PFDN4-201ENST00000371419 MALP21145 153 aa10.4□□□□□ -0.74
PFDN4-201ENST00000371419 RAB37Q96AX2 223 aa10.4□□□□□ -0.74
PFDN4-201ENST00000371419 BIRC6Q9NR09 4857 aa10.4□□□□□ -0.75
PFDN4-201ENST00000371419 C5orf38Q86SI9 138 aa10.39□□□□□ -0.75
PFDN4-201ENST00000371419 LRP1BQ9NZR2 4599 aa10.38□□□□□ -0.75
PFDN4-201ENST00000371419 IGHV3OR16-9A0A0B4J2B5 98 aa10.38□□□□□ -0.75
PFDN4-201ENST00000371419 UBE2V1Q13404 147 aa10.38□□□□□ -0.75
PFDN4-201ENST00000371419 CIRBPQ14011 172 aaKnown RBP10.38□□□□□ -0.75
PFDN4-201ENST00000371419 GVQW2A0A096LPI5 108 aaPredicted RBP10.37□□□□□ -0.75
PFDN4-201ENST00000371419 H3BUT2 72 aa10.37□□□□□ -0.75
PFDN4-201ENST00000371419 HERV-K104P63124 156 aa10.37□□□□□ -0.75
PFDN4-201ENST00000371419 RPL24P83731 157 aaKnown RBP10.37□□□□□ -0.75
PFDN4-201ENST00000371419 HIGD2BQ4VC39 106 aa10.37□□□□□ -0.75
PFDN4-201ENST00000371419 SPANXDQ9BXN6 97 aa10.37□□□□□ -0.75
PFDN4-201ENST00000371419 SPANXCQ9NY87 97 aa10.37□□□□□ -0.75
PFDN4-201ENST00000371419 LINC01561Q8N1V8 128 aa10.36□□□□□ -0.75
PFDN4-201ENST00000371419 A0A087WZ39 114 aa10.36□□□□□ -0.75
PFDN4-201ENST00000371419 APOMO95445 188 aa10.36□□□□□ -0.75
PFDN4-201ENST00000371419 CNBPP62633 177 aaKnown RBP10.36□□□□□ -0.75
PFDN4-201ENST00000371419 K7ERJ3 54 aa10.35□□□□□ -0.75
PFDN4-201ENST00000371419 KRTAP10-1P60331 282 aa10.35□□□□□ -0.75
PFDN4-201ENST00000371419 GTF2H5Q6ZYL4 71 aa10.35□□□□□ -0.75
PFDN4-201ENST00000371419 LITAFQ99732 161 aa10.35□□□□□ -0.75
PFDN4-201ENST00000371419 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.34□□□□□ -0.75
PFDN4-201ENST00000371419 A0A1W2PPM0 123 aa10.34□□□□□ -0.75
PFDN4-201ENST00000371419 FABP2P12104 132 aa10.34□□□□□ -0.75
PFDN4-201ENST00000371419 IFITM1P13164 125 aa10.34□□□□□ -0.75
PFDN4-201ENST00000371419 SFTA2Q6UW10 78 aa10.34□□□□□ -0.75
PFDN4-201ENST00000371419 COX7B2Q8TF08 81 aa10.34□□□□□ -0.75
PFDN4-201ENST00000371419 ZNF561-AS1K7EIQ3 104 aa10.33□□□□□ -0.76
PFDN4-201ENST00000371419 SLPIP03973 132 aa10.33□□□□□ -0.76
PFDN4-201ENST00000371419 MUSTN1Q8IVN3 82 aa10.33□□□□□ -0.76
PFDN4-201ENST00000371419 COPS9Q8WXC6 57 aa10.33□□□□□ -0.76
PFDN4-201ENST00000371419 ZNF625Q96I27 306 aaPredicted RBP10.33□□□□□ -0.76
PFDN4-201ENST00000371419 GAGE10A6NGK3 116 aa10.32□□□□□ -0.76
PFDN4-201ENST00000371419 LINC01620Q4KN68 170 aa10.32□□□□□ -0.76
PFDN4-201ENST00000371419 C9orf163Q8N9P6 203 aa10.32□□□□□ -0.76
PFDN4-201ENST00000371419 PRSS2P07478 247 aa10.31□□□□□ -0.76
PFDN4-201ENST00000371419 LINC00526Q96FQ7 95 aa10.31□□□□□ -0.76
PFDN4-201ENST00000371419 A0A0B4J2C4 111 aa10.3□□□□□ -0.76
PFDN4-201ENST00000371419 A4D1N5 150 aa10.3□□□□□ -0.76
PFDN4-201ENST00000371419 SPAG11BQ08648 103 aa10.3□□□□□ -0.76
PFDN4-201ENST00000371419 K7EP34 96 aa10.3□□□□□ -0.76
PFDN4-201ENST00000371419 CFC1BP0CG36 223 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms