RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 CUL9Q8IWT3 2517 aa12.85□□□□□ -0.35
CHRNA4-201ENST00000370263 LINC01006Q8NI28 216 aa12.84□□□□□ -0.35
CHRNA4-201ENST00000370263 FHL2Q14192 279 aa12.83□□□□□ -0.35
CHRNA4-201ENST00000370263 ZNF706Q9Y5V0 76 aaPredicted RBP12.83□□□□□ -0.35
CHRNA4-201ENST00000370263 PRRC2AP48634 2157 aaKnown RBP12.82□□□□□ -0.36
CHRNA4-201ENST00000370263 BCE1O60756 84 aa12.82□□□□□ -0.36
CHRNA4-201ENST00000370263 RETNQ9HD89 108 aa12.82□□□□□ -0.36
CHRNA4-201ENST00000370263 C4orf26Q17RF5 130 aa12.82□□□□□ -0.36
CHRNA4-201ENST00000370263 Q8N2B8 174 aa12.82□□□□□ -0.36
CHRNA4-201ENST00000370263 LINC00315P59091 139 aa12.81□□□□□ -0.36
CHRNA4-201ENST00000370263 COL5A1P20908 1838 aaPredicted RBP12.81□□□□□ -0.36
CHRNA4-201ENST00000370263 LINC01561Q8N1V8 128 aa12.81□□□□□ -0.36
CHRNA4-201ENST00000370263 AVPP01185 164 aa12.8□□□□□ -0.36
CHRNA4-201ENST00000370263 TRAV10A0A0B4J240 114 aa12.8□□□□□ -0.36
CHRNA4-201ENST00000370263 A0A1B0GUV1 79 aa12.8□□□□□ -0.36
CHRNA4-201ENST00000370263 C10orf25Q5T742 122 aa12.8□□□□□ -0.36
CHRNA4-201ENST00000370263 CEP192Q8TEP8 1941 aa12.79□□□□□ -0.36
CHRNA4-201ENST00000370263 OTOGLQ3ZCN5 2332 aa12.79□□□□□ -0.36
CHRNA4-201ENST00000370263 IGHV4-30-4P0DP06 118 aa12.79□□□□□ -0.36
CHRNA4-201ENST00000370263 A8MTW9 85 aa12.78□□□□□ -0.36
CHRNA4-201ENST00000370263 PLAC8L1A1L4L8 177 aa12.77□□□□□ -0.37
CHRNA4-201ENST00000370263 IGLV9-49A0A0B4J1Y8 123 aa12.77□□□□□ -0.37
CHRNA4-201ENST00000370263 NAV2Q8IVL1 2488 aa12.76□□□□□ -0.37
CHRNA4-201ENST00000370263 CDSNQ15517 529 aa12.76□□□□□ -0.37
CHRNA4-201ENST00000370263 MYO18BQ8IUG5 2567 aa12.76□□□□□ -0.37
CHRNA4-201ENST00000370263 C6orf223Q8N319 242 aa12.76□□□□□ -0.37
CHRNA4-201ENST00000370263 MYO9AB2RTY4 2548 aa12.76□□□□□ -0.37
CHRNA4-201ENST00000370263 H0Y9P7 68 aa12.75□□□□□ -0.37
CHRNA4-201ENST00000370263 hDV103S1A0JD37 113 aa12.75□□□□□ -0.37
CHRNA4-201ENST00000370263 FAM218AQ96MZ4 157 aa12.75□□□□□ -0.37
CHRNA4-201ENST00000370263 REG3GQ6UW15 175 aa12.74□□□□□ -0.37
CHRNA4-201ENST00000370263 HCG22E2RYF7 251 aa12.74□□□□□ -0.37
CHRNA4-201ENST00000370263 SRCAPQ6ZRS2 3230 aa12.73□□□□□ -0.37
CHRNA4-201ENST00000370263 TET2Q6N021 2002 aaPredicted RBP12.73□□□□□ -0.37
CHRNA4-201ENST00000370263 IL17DQ8TAD2 202 aa12.73□□□□□ -0.37
CHRNA4-201ENST00000370263 HIVEP3Q5T1R4 2406 aa12.72□□□□□ -0.37
CHRNA4-201ENST00000370263 IGLV5-45A0A087WSX0 123 aa12.72□□□□□ -0.37
CHRNA4-201ENST00000370263 FAM19A4Q96LR4 140 aa12.72□□□□□ -0.37
CHRNA4-201ENST00000370263 PCOTHQ58A44 107 aa12.72□□□□□ -0.37
CHRNA4-201ENST00000370263 IGLV1-51P01701 117 aa12.71□□□□□ -0.37
CHRNA4-201ENST00000370263 SPATA3Q8NHX4 192 aa12.71□□□□□ -0.37
CHRNA4-201ENST00000370263 A0A087WSZ3 146 aa12.71□□□□□ -0.38
CHRNA4-201ENST00000370263 LIMD2Q9BT23 127 aa12.7□□□□□ -0.38
CHRNA4-201ENST00000370263 IGHV3OR16-9A0A0B4J2B5 98 aa12.69□□□□□ -0.38
CHRNA4-201ENST00000370263 ADAMTS20P59510 1910 aa12.68□□□□□ -0.38
CHRNA4-201ENST00000370263 F8WDY8 70 aa12.68□□□□□ -0.38
CHRNA4-201ENST00000370263 C2orf48Q96LS8 159 aa12.68□□□□□ -0.38
CHRNA4-201ENST00000370263 LINC00474Q9P2X8 69 aa12.68□□□□□ -0.38
CHRNA4-201ENST00000370263 PIEZO2Q9H5I5 2752 aa12.68□□□□□ -0.38
CHRNA4-201ENST00000370263 C11orf72Q8NBR9 251 aa12.67□□□□□ -0.38
CHRNA4-201ENST00000370263 SMIM29Q86T20 159 aa12.67□□□□□ -0.38
CHRNA4-201ENST00000370263 INAFM1C9JVW0 142 aa12.66□□□□□ -0.38
CHRNA4-201ENST00000370263 C7orf33Q8WU49 177 aa12.66□□□□□ -0.38
CHRNA4-201ENST00000370263 Q9BRP9 147 aa12.65□□□□□ -0.38
CHRNA4-201ENST00000370263 DEFB116Q30KQ4 102 aa12.65□□□□□ -0.38
CHRNA4-201ENST00000370263 IGHV6-1A0A0B4J1U7 121 aa12.64□□□□□ -0.39
CHRNA4-201ENST00000370263 CCDC168Q8NDH2 2452 aa12.63□□□□□ -0.39
CHRNA4-201ENST00000370263 EXPH5Q8NEV8 1989 aa12.63□□□□□ -0.39
CHRNA4-201ENST00000370263 RAI1Q7Z5J4 1906 aaPredicted RBP12.63□□□□□ -0.39
CHRNA4-201ENST00000370263 C1orf64Q8NEQ6 169 aa12.62□□□□□ -0.39
CHRNA4-201ENST00000370263 Q6ZQT0 140 aa12.61□□□□□ -0.39
CHRNA4-201ENST00000370263 A0A1W2PPR1 153 aa12.6□□□□□ -0.39
CHRNA4-201ENST00000370263 PRO3102Q9H379 93 aa12.6□□□□□ -0.39
CHRNA4-201ENST00000370263 Q6ZRU5 148 aa12.59□□□□□ -0.39
CHRNA4-201ENST00000370263 LOC110117498A0A087WWA1 95 aa12.59□□□□□ -0.39
CHRNA4-201ENST00000370263 FHL3Q13643 280 aa12.59□□□□□ -0.39
CHRNA4-201ENST00000370263 LITAFQ99732 161 aa12.59□□□□□ -0.39
CHRNA4-201ENST00000370263 ABCA2Q9BZC7 2435 aa12.58□□□□□ -0.39
CHRNA4-201ENST00000370263 SMCR5Q8TEV8 140 aa12.58□□□□□ -0.4
CHRNA4-201ENST00000370263 WDR87Q6ZQQ6 2873 aa12.58□□□□□ -0.4
CHRNA4-201ENST00000370263 KIAA0087Q14695 138 aa12.58□□□□□ -0.4
CHRNA4-201ENST00000370263 Q9UF83 564 aa12.57□□□□□ -0.4
CHRNA4-201ENST00000370263 NHLRC4P0CG21 123 aaPredicted RBP12.56□□□□□ -0.4
CHRNA4-201ENST00000370263 LYPD5Q6UWN5 251 aa12.56□□□□□ -0.4
CHRNA4-201ENST00000370263 PLA2G2AP14555 144 aa12.55□□□□□ -0.4
CHRNA4-201ENST00000370263 A0A1B0GW54 56 aa12.55□□□□□ -0.4
CHRNA4-201ENST00000370263 TM2D3Q9BRN9 247 aa12.54□□□□□ -0.4
CHRNA4-201ENST00000370263 LY6G6DO95868 133 aa12.54□□□□□ -0.4
CHRNA4-201ENST00000370263 TLN1Q9Y490 2541 aaKnown RBP12.53□□□□□ -0.4
CHRNA4-201ENST00000370263 Q6ZTC4 211 aa12.52□□□□□ -0.4
CHRNA4-201ENST00000370263 ELOF1P60002 83 aaKnown RBP12.5□□□□□ -0.41
CHRNA4-201ENST00000370263 M0R2N4 97 aa12.49□□□□□ -0.41
CHRNA4-201ENST00000370263 CIRBP-AS1Q8TBR5 109 aa12.48□□□□□ -0.41
CHRNA4-201ENST00000370263 OXLD1Q5BKU9 147 aa12.48□□□□□ -0.41
CHRNA4-201ENST00000370263 IGF2RP11717 2491 aa12.48□□□□□ -0.41
CHRNA4-201ENST00000370263 C22orf24Q9Y442 160 aa12.48□□□□□ -0.41
CHRNA4-201ENST00000370263 PRLHP81277 87 aa12.47□□□□□ -0.41
CHRNA4-201ENST00000370263 C16orf95Q9H693 158 aa12.47□□□□□ -0.41
CHRNA4-201ENST00000370263 PTPRBP23467 1997 aa12.46□□□□□ -0.41
CHRNA4-201ENST00000370263 C6orf48Q9UBA6 75 aa12.46□□□□□ -0.42
CHRNA4-201ENST00000370263 H3BPC8 53 aa12.45□□□□□ -0.42
CHRNA4-201ENST00000370263 TP53AIP1Q9HCN2 124 aa12.44□□□□□ -0.42
CHRNA4-201ENST00000370263 RETNLBQ9BQ08 111 aa12.43□□□□□ -0.42
CHRNA4-201ENST00000370263 Q8NBF4 154 aa12.42□□□□□ -0.42
CHRNA4-201ENST00000370263 SPINK1P00995 79 aa12.42□□□□□ -0.42
CHRNA4-201ENST00000370263 ERC2-IT1O76042 136 aa12.42□□□□□ -0.42
CHRNA4-201ENST00000370263 DOPEY1Q5JWR5 2465 aa12.4□□□□□ -0.42
CHRNA4-201ENST00000370263 SPAG11AQ6PDA7 123 aa12.4□□□□□ -0.42
CHRNA4-201ENST00000370263 A0A1B0GU69 56 aa12.4□□□□□ -0.43
CHRNA4-201ENST00000370263 KRTAP10-9P60411 292 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms