RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 SETXQ7Z333 2677 aaKnown RBP8.68□□□□□ -1.02
PHGDH-201ENST00000369407 MTORP42345 2549 aa8.67□□□□□ -1.02
PHGDH-201ENST00000369407 A8MTW9 85 aa8.67□□□□□ -1.02
PHGDH-201ENST00000369407 IGLV4-60A0A075B6I1 120 aa8.67□□□□□ -1.02
PHGDH-201ENST00000369407 DEFB114Q30KQ6 69 aa8.67□□□□□ -1.02
PHGDH-201ENST00000369407 ODF3L2Q3SX64 289 aa8.67□□□□□ -1.02
PHGDH-201ENST00000369407 STHQ8IWL8 128 aa8.67□□□□□ -1.02
PHGDH-201ENST00000369407 MRAPQ8TCY5 172 aa8.67□□□□□ -1.02
PHGDH-201ENST00000369407 GHRHP01286 108 aa8.66□□□□□ -1.02
PHGDH-201ENST00000369407 USP24Q9UPU5 2620 aa8.66□□□□□ -1.02
PHGDH-201ENST00000369407 PRR3P79522 188 aaKnown RBP8.65□□□□□ -1.02
PHGDH-201ENST00000369407 NBEAL2Q6ZNJ1 2754 aa8.65□□□□□ -1.02
PHGDH-201ENST00000369407 LINC01561Q8N1V8 128 aa8.65□□□□□ -1.02
PHGDH-201ENST00000369407 TRGV2A0A075B6R0 118 aa8.65□□□□□ -1.03
PHGDH-201ENST00000369407 LINC01356Q8N9X3 169 aa8.65□□□□□ -1.03
PHGDH-201ENST00000369407 WFDC10AQ9H1F0 79 aa8.65□□□□□ -1.03
PHGDH-201ENST00000369407 ZNF469Q96JG9 3925 aaPredicted RBP8.64□□□□□ -1.03
PHGDH-201ENST00000369407 FAM19A3Q7Z5A8 133 aa8.64□□□□□ -1.03
PHGDH-201ENST00000369407 CLPSL2Q6UWE3 100 aa8.63□□□□□ -1.03
PHGDH-201ENST00000369407 PRO0628Q9UI54 55 aa8.63□□□□□ -1.03
PHGDH-201ENST00000369407 SNURFQ9Y675 71 aa8.63□□□□□ -1.03
PHGDH-201ENST00000369407 PF4P02776 101 aa8.62□□□□□ -1.03
PHGDH-201ENST00000369407 SEC61GP60059 68 aa8.62□□□□□ -1.03
PHGDH-201ENST00000369407 Q6YL49 198 aa8.62□□□□□ -1.03
PHGDH-201ENST00000369407 TRBV10-1A0A0K0K1A3 114 aa8.61□□□□□ -1.03
PHGDH-201ENST00000369407 FAM19A1Q7Z5A9 133 aa8.61□□□□□ -1.03
PHGDH-201ENST00000369407 XCL1P47992 114 aa8.6□□□□□ -1.03
PHGDH-201ENST00000369407 IL17DQ8TAD2 202 aa8.6□□□□□ -1.03
PHGDH-201ENST00000369407 UPK3BQ9BT76 320 aa8.6□□□□□ -1.03
PHGDH-201ENST00000369407 TRGV4A0A0C4DH28 118 aa8.6□□□□□ -1.03
PHGDH-201ENST00000369407 SS18Q15532 418 aa8.6□□□□□ -1.03
PHGDH-201ENST00000369407 Q6JHZ5 121 aa8.6□□□□□ -1.03
PHGDH-201ENST00000369407 MPLKIPQ8TAP9 179 aa8.6□□□□□ -1.03
PHGDH-201ENST00000369407 IGHV3OR16-9A0A0B4J2B5 98 aa8.59□□□□□ -1.03
PHGDH-201ENST00000369407 H0YGX0 51 aa8.59□□□□□ -1.03
PHGDH-201ENST00000369407 C6orf226Q5I0X4 101 aa8.59□□□□□ -1.03
PHGDH-201ENST00000369407 ENHOQ6UWT2 76 aa8.59□□□□□ -1.03
PHGDH-201ENST00000369407 RBM3P98179 157 aaKnown RBP8.59□□□□□ -1.04
PHGDH-201ENST00000369407 S100A7L2Q5SY68 101 aa8.59□□□□□ -1.04
PHGDH-201ENST00000369407 LINC00474Q9P2X8 69 aa8.59□□□□□ -1.04
PHGDH-201ENST00000369407 C4orf3Q8WVX3 66 aa8.58□□□□□ -1.04
PHGDH-201ENST00000369407 V9GYY9 64 aa8.58□□□□□ -1.04
PHGDH-201ENST00000369407 A0A096LPF7 62 aa8.58□□□□□ -1.04
PHGDH-201ENST00000369407 OBSCN-AS1Q96MR7 158 aa8.58□□□□□ -1.04
PHGDH-201ENST00000369407 OVOL2Q9BRP0 275 aa8.58□□□□□ -1.04
PHGDH-201ENST00000369407 ORMDL1Q9P0S3 153 aa8.58□□□□□ -1.04
PHGDH-201ENST00000369407 GCN1Q92616 2671 aaKnown RBP8.57□□□□□ -1.04
PHGDH-201ENST00000369407 IBA57-AS1B1ANH7 110 aa8.56□□□□□ -1.04
PHGDH-201ENST00000369407 TRBV6-4A0A1B0GX49 114 aa8.56□□□□□ -1.04
PHGDH-201ENST00000369407 GIG44P09565 113 aaPredicted RBP8.56□□□□□ -1.04
PHGDH-201ENST00000369407 C1orf195Q5TG92 126 aa8.56□□□□□ -1.04
PHGDH-201ENST00000369407 TRBV6-8A0A0A6YYG3 113 aa8.55□□□□□ -1.04
PHGDH-201ENST00000369407 PLAC8L1A1L4L8 177 aa8.55□□□□□ -1.04
PHGDH-201ENST00000369407 A0A096LNT2 108 aa8.55□□□□□ -1.04
PHGDH-201ENST00000369407 DEFB130BP0DP73 79 aa8.55□□□□□ -1.04
PHGDH-201ENST00000369407 DEFB130AP0DP74 79 aa8.55□□□□□ -1.04
PHGDH-201ENST00000369407 APCP25054 2843 aa8.55□□□□□ -1.04
PHGDH-201ENST00000369407 A0A087WZ39 114 aa8.55□□□□□ -1.04
PHGDH-201ENST00000369407 CR1P17927 2039 aa8.54□□□□□ -1.04
PHGDH-201ENST00000369407 CCKP06307 115 aa8.54□□□□□ -1.04
PHGDH-201ENST00000369407 TMEM86BQ8N661 226 aa8.54□□□□□ -1.04
PHGDH-201ENST00000369407 LINC00959A0A1B0GUT2 108 aa8.54□□□□□ -1.04
PHGDH-201ENST00000369407 C9orf116Q5BN46 136 aaPredicted RBP8.54□□□□□ -1.04
PHGDH-201ENST00000369407 RMI2Q96E14 147 aa8.54□□□□□ -1.04
PHGDH-201ENST00000369407 F8WDY8 70 aa8.53□□□□□ -1.04
PHGDH-201ENST00000369407 IGHV4-31P0DP07 118 aa8.53□□□□□ -1.04
PHGDH-201ENST00000369407 NANOS2P60321 138 aaKnown RBP8.53□□□□□ -1.04
PHGDH-201ENST00000369407 FLNAP21333 2647 aaKnown RBP8.52□□□□□ -1.05
PHGDH-201ENST00000369407 IGLV10-54A0A075B6I4 117 aa8.52□□□□□ -1.05
PHGDH-201ENST00000369407 Q8N814 137 aa8.51□□□□□ -1.05
PHGDH-201ENST00000369407 CCL24O00175 119 aa8.51□□□□□ -1.05
PHGDH-201ENST00000369407 F8WEM9 126 aa8.51□□□□□ -1.05
PHGDH-201ENST00000369407 KRTAP10-9P60411 292 aa8.51□□□□□ -1.05
PHGDH-201ENST00000369407 Q8N3U1 123 aa8.51□□□□□ -1.05
PHGDH-201ENST00000369407 NDUFC2O95298 119 aa8.5□□□□□ -1.05
PHGDH-201ENST00000369407 DSCR9P59020 149 aa8.5□□□□□ -1.05
PHGDH-201ENST00000369407 HAMPP81172 84 aa8.5□□□□□ -1.05
PHGDH-201ENST00000369407 M0R2N4 97 aa8.5□□□□□ -1.05
PHGDH-201ENST00000369407 FSHBP01225 129 aa8.5□□□□□ -1.05
PHGDH-201ENST00000369407 Q8NDZ9 215 aa8.5□□□□□ -1.05
PHGDH-201ENST00000369407 C6orf99Q4VX62 202 aa8.49□□□□□ -1.05
PHGDH-201ENST00000369407 C16orf74Q96GX8 76 aa8.49□□□□□ -1.05
PHGDH-201ENST00000369407 LY6G6DO95868 133 aa8.49□□□□□ -1.05
PHGDH-201ENST00000369407 SPATA3Q8NHX4 192 aa8.49□□□□□ -1.05
PHGDH-201ENST00000369407 ITPR3Q14573 2671 aa8.49□□□□□ -1.05
PHGDH-201ENST00000369407 ITPR2Q14571 2701 aa8.48□□□□□ -1.05
PHGDH-201ENST00000369407 FP248Q71RG6 208 aaPredicted RBP8.48□□□□□ -1.05
PHGDH-201ENST00000369407 GYPEP15421 78 aa8.48□□□□□ -1.05
PHGDH-201ENST00000369407 LINC00482Q8N8I6 264 aa8.48□□□□□ -1.05
PHGDH-201ENST00000369407 ESM1Q9NQ30 184 aa8.48□□□□□ -1.05
PHGDH-201ENST00000369407 SERP1Q9Y6X1 66 aa8.48□□□□□ -1.05
PHGDH-201ENST00000369407 LINC00269Q8N2A0 174 aa8.47□□□□□ -1.05
PHGDH-201ENST00000369407 HIVEP2P31629 2446 aa8.47□□□□□ -1.05
PHGDH-201ENST00000369407 HELZ2Q9BYK8 2649 aaKnown RBP8.47□□□□□ -1.05
PHGDH-201ENST00000369407 SCXQ7RTU7 201 aa8.46□□□□□ -1.05
PHGDH-201ENST00000369407 BBC3Q96PG8 261 aaPredicted RBP8.46□□□□□ -1.05
PHGDH-201ENST00000369407 LRCOL1A6NCL2 159 aa8.46□□□□□ -1.06
PHGDH-201ENST00000369407 H7BZZ5 65 aa8.46□□□□□ -1.06
PHGDH-201ENST00000369407 HECTD1Q9ULT8 2610 aa8.46□□□□□ -1.06
PHGDH-201ENST00000369407 JMJD7-PLA2G4BH0Y9G9 81 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms