RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 PKIGQ9Y2B9 76 aa11.2□□□□□ -0.62
CHD1L-203ENST00000369259 CSPG4Q6UVK1 2322 aa11.2□□□□□ -0.62
CHD1L-203ENST00000369259 B4DSR2 109 aa11.2□□□□□ -0.62
CHD1L-203ENST00000369259 VPS13CQ709C8 3753 aa11.2□□□□□ -0.62
CHD1L-203ENST00000369259 CEP295Q9C0D2 2601 aa11.19□□□□□ -0.62
CHD1L-203ENST00000369259 M0R2N4 97 aa11.19□□□□□ -0.62
CHD1L-203ENST00000369259 ODF3L2Q3SX64 289 aa11.19□□□□□ -0.62
CHD1L-203ENST00000369259 C6orf99Q4VX62 202 aa11.19□□□□□ -0.62
CHD1L-203ENST00000369259 Q8IZM0 81 aa11.19□□□□□ -0.62
CHD1L-203ENST00000369259 CXCL6P80162 114 aa11.19□□□□□ -0.62
CHD1L-203ENST00000369259 LINC00575Q6W349 94 aa11.19□□□□□ -0.62
CHD1L-203ENST00000369259 C6orf223Q8N319 242 aa11.19□□□□□ -0.62
CHD1L-203ENST00000369259 TRGV2A0A075B6R0 118 aa11.18□□□□□ -0.62
CHD1L-203ENST00000369259 CCL19Q99731 98 aa11.18□□□□□ -0.62
CHD1L-203ENST00000369259 LINC00474Q9P2X8 69 aa11.18□□□□□ -0.62
CHD1L-203ENST00000369259 LAMTOR3Q9UHA4 124 aa11.18□□□□□ -0.62
CHD1L-203ENST00000369259 ATP5EP56381 51 aaPredicted RBP11.18□□□□□ -0.62
CHD1L-203ENST00000369259 F8WDY8 70 aa11.17□□□□□ -0.62
CHD1L-203ENST00000369259 KHDC1LQ5JSQ8 128 aa11.17□□□□□ -0.62
CHD1L-203ENST00000369259 ATRXP46100 2492 aa11.16□□□□□ -0.62
CHD1L-203ENST00000369259 TRGV4A0A0C4DH28 118 aa11.16□□□□□ -0.62
CHD1L-203ENST00000369259 Q8N3U1 123 aa11.16□□□□□ -0.62
CHD1L-203ENST00000369259 HIVEP3Q5T1R4 2406 aa11.15□□□□□ -0.62
CHD1L-203ENST00000369259 TM2D3Q9BRN9 247 aa11.15□□□□□ -0.62
CHD1L-203ENST00000369259 TRBV7-4A0A0J9YYF1 115 aa11.14□□□□□ -0.63
CHD1L-203ENST00000369259 PDE6GP18545 87 aa11.14□□□□□ -0.63
CHD1L-203ENST00000369259 CRYBG3Q68DQ2 2970 aa11.14□□□□□ -0.63
CHD1L-203ENST00000369259 MIFP14174 115 aa11.13□□□□□ -0.63
CHD1L-203ENST00000369259 COX17Q14061 63 aa11.13□□□□□ -0.63
CHD1L-203ENST00000369259 PLAC8L1A1L4L8 177 aa11.12□□□□□ -0.63
CHD1L-203ENST00000369259 C9orf66Q5T8R8 295 aa11.12□□□□□ -0.63
CHD1L-203ENST00000369259 BRK1Q8WUW1 75 aa11.12□□□□□ -0.63
CHD1L-203ENST00000369259 C4orf3Q8WVX3 66 aa11.12□□□□□ -0.63
CHD1L-203ENST00000369259 ZNF843Q8N446 348 aa11.12□□□□□ -0.63
CHD1L-203ENST00000369259 C16orf74Q96GX8 76 aa11.11□□□□□ -0.63
CHD1L-203ENST00000369259 Q8NDZ9 215 aa11.1□□□□□ -0.63
CHD1L-203ENST00000369259 NREPQ16612 68 aa11.09□□□□□ -0.63
CHD1L-203ENST00000369259 KIAA0087Q14695 138 aa11.08□□□□□ -0.64
CHD1L-203ENST00000369259 H3BQ85 93 aa11.08□□□□□ -0.64
CHD1L-203ENST00000369259 Q6YL49 198 aa11.08□□□□□ -0.64
CHD1L-203ENST00000369259 MUC7Q8TAX7 377 aa11.08□□□□□ -0.64
CHD1L-203ENST00000369259 TMEM254Q8TBM7 123 aa11.08□□□□□ -0.64
CHD1L-203ENST00000369259 SCXQ7RTU7 201 aa11.07□□□□□ -0.64
CHD1L-203ENST00000369259 GIG44P09565 113 aaPredicted RBP11.06□□□□□ -0.64
CHD1L-203ENST00000369259 Q6ZQY7 126 aa11.06□□□□□ -0.64
CHD1L-203ENST00000369259 SPATA3Q8NHX4 192 aa11.06□□□□□ -0.64
CHD1L-203ENST00000369259 SPTBN4Q9H254 2564 aa11.06□□□□□ -0.64
CHD1L-203ENST00000369259 IGHV4-28A0A0C4DH34 117 aa11.06□□□□□ -0.64
CHD1L-203ENST00000369259 ERC2-IT1O76042 136 aa11.06□□□□□ -0.64
CHD1L-203ENST00000369259 C9orf116Q5BN46 136 aaPredicted RBP11.06□□□□□ -0.64
CHD1L-203ENST00000369259 C1orf195Q5TG92 126 aa11.06□□□□□ -0.64
CHD1L-203ENST00000369259 CLPSL2Q6UWE3 100 aa11.06□□□□□ -0.64
CHD1L-203ENST00000369259 LINC01356Q8N9X3 169 aa11.06□□□□□ -0.64
CHD1L-203ENST00000369259 A0A0U1RQV1 116 aa11.05□□□□□ -0.64
CHD1L-203ENST00000369259 A0A1B0GUV1 79 aa11.05□□□□□ -0.64
CHD1L-203ENST00000369259 NOTCH3Q9UM47 2321 aa11.05□□□□□ -0.64
CHD1L-203ENST00000369259 BPY2O14599 106 aa11.05□□□□□ -0.64
CHD1L-203ENST00000369259 PLA2G2AP14555 144 aa11.04□□□□□ -0.64
CHD1L-203ENST00000369259 FAM229BQ4G0N7 80 aa11.04□□□□□ -0.64
CHD1L-203ENST00000369259 MAP1AP78559 2803 aaPredicted RBP11.04□□□□□ -0.64
CHD1L-203ENST00000369259 MPLKIPQ8TAP9 179 aa11.03□□□□□ -0.64
CHD1L-203ENST00000369259 V9GYY9 64 aa11.03□□□□□ -0.64
CHD1L-203ENST00000369259 SPG11Q96JI7 2443 aa11.02□□□□□ -0.64
CHD1L-203ENST00000369259 LINC00269Q8N2A0 174 aa11.02□□□□□ -0.65
CHD1L-203ENST00000369259 IGLV6-57P01721 117 aa11.01□□□□□ -0.65
CHD1L-203ENST00000369259 GNLYP22749 145 aa11.01□□□□□ -0.65
CHD1L-203ENST00000369259 CD164L2Q6UWJ8 174 aa11.01□□□□□ -0.65
CHD1L-203ENST00000369259 IGF2RP11717 2491 aa10.99□□□□□ -0.65
CHD1L-203ENST00000369259 PRYO14603 147 aa10.98□□□□□ -0.65
CHD1L-203ENST00000369259 DSCR9P59020 149 aa10.98□□□□□ -0.65
CHD1L-203ENST00000369259 CSMD2Q7Z408 3487 aa10.98□□□□□ -0.65
CHD1L-203ENST00000369259 GYPEP15421 78 aa10.98□□□□□ -0.65
CHD1L-203ENST00000369259 ESRGQ1W209 222 aa10.98□□□□□ -0.65
CHD1L-203ENST00000369259 SEC61GP60059 68 aa10.97□□□□□ -0.65
CHD1L-203ENST00000369259 CHCHD10Q8WYQ3 142 aaPredicted RBP10.97□□□□□ -0.65
CHD1L-203ENST00000369259 FSHBP01225 129 aa10.97□□□□□ -0.65
CHD1L-203ENST00000369259 IGHV4-31P0DP07 118 aa10.97□□□□□ -0.65
CHD1L-203ENST00000369259 FUSP35637 526 aaKnown RBP eCLIP10.97□□□□□ -0.65
CHD1L-203ENST00000369259 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.97□□□□□ -0.65
CHD1L-203ENST00000369259 CSNK1G2-AS1Q8NCQ2 148 aa10.97□□□□□ -0.65
CHD1L-203ENST00000369259 MAPK1IP1LQ8NDC0 245 aa10.96□□□□□ -0.66
CHD1L-203ENST00000369259 CMC4P56277 68 aaPredicted RBP10.95□□□□□ -0.66
CHD1L-203ENST00000369259 Q6ZTC4 211 aa10.95□□□□□ -0.66
CHD1L-203ENST00000369259 OCR1Q9BZK8 76 aa10.95□□□□□ -0.66
CHD1L-203ENST00000369259 WFDC10AQ9H1F0 79 aa10.95□□□□□ -0.66
CHD1L-203ENST00000369259 IGLV10-54A0A075B6I4 117 aa10.94□□□□□ -0.66
CHD1L-203ENST00000369259 DEFB130BP0DP73 79 aa10.94□□□□□ -0.66
CHD1L-203ENST00000369259 DEFB130AP0DP74 79 aa10.94□□□□□ -0.66
CHD1L-203ENST00000369259 DIRC1Q969H9 104 aa10.94□□□□□ -0.66
CHD1L-203ENST00000369259 CELSR2Q9HCU4 2923 aa10.94□□□□□ -0.66
CHD1L-203ENST00000369259 LINC01006Q8NI28 216 aa10.94□□□□□ -0.66
CHD1L-203ENST00000369259 CCL24O00175 119 aa10.93□□□□□ -0.66
CHD1L-203ENST00000369259 IGKV4-1P06312 121 aa10.93□□□□□ -0.66
CHD1L-203ENST00000369259 C10orf25Q5T742 122 aa10.93□□□□□ -0.66
CHD1L-203ENST00000369259 UNQ6190/PRO20217Q6UXQ8 127 aa10.93□□□□□ -0.66
CHD1L-203ENST00000369259 Q8N9L7 120 aa10.93□□□□□ -0.66
CHD1L-203ENST00000369259 COX7BP24311 80 aa10.92□□□□□ -0.66
CHD1L-203ENST00000369259 BBC3Q96PG8 261 aaPredicted RBP10.91□□□□□ -0.66
CHD1L-203ENST00000369259 A0A096LPF7 62 aa10.91□□□□□ -0.66
CHD1L-203ENST00000369259 REG3AQ06141 175 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms