RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 Q1T7F1 81 aa7.46□□□□□ -1.21
PRDM1-201ENST00000369089 C1orf64Q8NEQ6 169 aa7.46□□□□□ -1.21
PRDM1-201ENST00000369089 CCDC140Q96MF4 163 aa7.46□□□□□ -1.21
PRDM1-201ENST00000369089 C9orf116Q5BN46 136 aaPredicted RBP7.46□□□□□ -1.22
PRDM1-201ENST00000369089 KLLNB2CW77 178 aa7.45□□□□□ -1.22
PRDM1-201ENST00000369089 EIF4EBP3O60516 100 aaPredicted RBP7.45□□□□□ -1.22
PRDM1-201ENST00000369089 COX6A2Q02221 97 aa7.45□□□□□ -1.22
PRDM1-201ENST00000369089 Q8N9L7 120 aa7.45□□□□□ -1.22
PRDM1-201ENST00000369089 PROK1P58294 105 aa7.45□□□□□ -1.22
PRDM1-201ENST00000369089 Q6ZQT0 140 aa7.45□□□□□ -1.22
PRDM1-201ENST00000369089 DEFB130BP0DP73 79 aa7.45□□□□□ -1.22
PRDM1-201ENST00000369089 DEFB130AP0DP74 79 aa7.45□□□□□ -1.22
PRDM1-201ENST00000369089 RETNLBQ9BQ08 111 aa7.45□□□□□ -1.22
PRDM1-201ENST00000369089 LOC110117498A0A087WWA1 95 aa7.44□□□□□ -1.22
PRDM1-201ENST00000369089 IGLV5-39A0A0G2JS06 123 aa7.44□□□□□ -1.22
PRDM1-201ENST00000369089 DNAJC9-AS1A6NH13 148 aa7.44□□□□□ -1.22
PRDM1-201ENST00000369089 C6orf223Q8N319 242 aa7.44□□□□□ -1.22
PRDM1-201ENST00000369089 K7EMT4 169 aa7.44□□□□□ -1.22
PRDM1-201ENST00000369089 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.43□□□□□ -1.22
PRDM1-201ENST00000369089 CHCHD7Q9BUK0 85 aa7.43□□□□□ -1.22
PRDM1-201ENST00000369089 KIF25-AS1Q9Y6Z4 181 aa7.43□□□□□ -1.22
PRDM1-201ENST00000369089 DEFB113Q30KQ7 82 aa7.43□□□□□ -1.22
PRDM1-201ENST00000369089 SMIM29Q86T20 159 aa7.43□□□□□ -1.22
PRDM1-201ENST00000369089 ZNF706Q9Y5V0 76 aaPredicted RBP7.43□□□□□ -1.22
PRDM1-201ENST00000369089 SPAG11AQ6PDA7 123 aa7.43□□□□□ -1.22
PRDM1-201ENST00000369089 LINC00575Q6W349 94 aa7.43□□□□□ -1.22
PRDM1-201ENST00000369089 SETD2Q9BYW2 2564 aaPredicted RBP7.43□□□□□ -1.22
PRDM1-201ENST00000369089 CPAMD8Q8IZJ3 1885 aa7.42□□□□□ -1.22
PRDM1-201ENST00000369089 BBC3Q96PG8 261 aaPredicted RBP7.42□□□□□ -1.22
PRDM1-201ENST00000369089 NOP10Q9NPE3 64 aaKnown RBP7.42□□□□□ -1.22
PRDM1-201ENST00000369089 LMO4P61968 165 aa7.42□□□□□ -1.22
PRDM1-201ENST00000369089 SYCNQ0VAF6 134 aa7.42□□□□□ -1.22
PRDM1-201ENST00000369089 C5orf56Q8N8D9 126 aa7.42□□□□□ -1.22
PRDM1-201ENST00000369089 PRRC2CQ9Y520 2896 aaKnown RBP7.42□□□□□ -1.22
PRDM1-201ENST00000369089 C11orf45Q8TAV5 145 aa7.42□□□□□ -1.22
PRDM1-201ENST00000369089 ZFYVE26Q68DK2 2539 aa7.42□□□□□ -1.22
PRDM1-201ENST00000369089 IGLV10-54A0A075B6I4 117 aa7.42□□□□□ -1.22
PRDM1-201ENST00000369089 C19orf84I3L1E1 186 aa7.42□□□□□ -1.22
PRDM1-201ENST00000369089 IGKV4-1P06312 121 aa7.42□□□□□ -1.22
PRDM1-201ENST00000369089 C11orf72Q8NBR9 251 aa7.42□□□□□ -1.22
PRDM1-201ENST00000369089 CCL24O00175 119 aa7.41□□□□□ -1.22
PRDM1-201ENST00000369089 SPATA3Q8NHX4 192 aa7.41□□□□□ -1.22
PRDM1-201ENST00000369089 CDC42SE2Q9NRR3 84 aa7.41□□□□□ -1.22
PRDM1-201ENST00000369089 A0A0J9YWU9 116 aa7.41□□□□□ -1.22
PRDM1-201ENST00000369089 COX17Q14061 63 aa7.4□□□□□ -1.22
PRDM1-201ENST00000369089 ABCA12Q86UK0 2595 aa7.4□□□□□ -1.22
PRDM1-201ENST00000369089 JMJD1CQ15652 2540 aa7.4□□□□□ -1.23
PRDM1-201ENST00000369089 H0Y9J4 135 aa7.39□□□□□ -1.23
PRDM1-201ENST00000369089 CAMK2N2Q96S95 79 aa7.39□□□□□ -1.23
PRDM1-201ENST00000369089 TET2Q6N021 2002 aaPredicted RBP7.39□□□□□ -1.23
PRDM1-201ENST00000369089 LINC00315P59091 139 aa7.39□□□□□ -1.23
PRDM1-201ENST00000369089 LRRK2Q5S007 2527 aa7.39□□□□□ -1.23
PRDM1-201ENST00000369089 LOC101927531A0A1B0GV80 90 aa7.38□□□□□ -1.23
PRDM1-201ENST00000369089 DEFB136Q30KP8 78 aa7.38□□□□□ -1.23
PRDM1-201ENST00000369089 C10orf25Q5T742 122 aa7.38□□□□□ -1.23
PRDM1-201ENST00000369089 H0Y9P7 68 aa7.38□□□□□ -1.23
PRDM1-201ENST00000369089 CHD7Q9P2D1 2997 aa7.38□□□□□ -1.23
PRDM1-201ENST00000369089 IGLV5-45A0A087WSX0 123 aa7.38□□□□□ -1.23
PRDM1-201ENST00000369089 ODF3BA8MYP8 253 aa7.38□□□□□ -1.23
PRDM1-201ENST00000369089 Q8IZM0 81 aa7.37□□□□□ -1.23
PRDM1-201ENST00000369089 PRR3P79522 188 aaKnown RBP7.37□□□□□ -1.23
PRDM1-201ENST00000369089 TRBV7-4A0A0J9YYF1 115 aa7.36□□□□□ -1.23
PRDM1-201ENST00000369089 FAM229BQ4G0N7 80 aa7.36□□□□□ -1.23
PRDM1-201ENST00000369089 C16orf95Q9H693 158 aa7.36□□□□□ -1.23
PRDM1-201ENST00000369089 A0A096LPF7 62 aa7.36□□□□□ -1.23
PRDM1-201ENST00000369089 PSCAO43653 123 aa7.36□□□□□ -1.23
PRDM1-201ENST00000369089 ELOF1P60002 83 aaKnown RBP7.36□□□□□ -1.23
PRDM1-201ENST00000369089 CDC42SE1Q9NRR8 79 aa7.36□□□□□ -1.23
PRDM1-201ENST00000369089 HTTP42858 3142 aa7.35□□□□□ -1.23
PRDM1-201ENST00000369089 LINC01554Q52M75 96 aa7.35□□□□□ -1.23
PRDM1-201ENST00000369089 K7ERS5 55 aa7.35□□□□□ -1.23
PRDM1-201ENST00000369089 C11orf71Q6IPW1 123 aa7.35□□□□□ -1.23
PRDM1-201ENST00000369089 LINC00588Q9Y4M8 146 aa7.35□□□□□ -1.23
PRDM1-201ENST00000369089 SLURP1P55000 103 aa7.34□□□□□ -1.23
PRDM1-201ENST00000369089 GYPEP15421 78 aa7.34□□□□□ -1.23
PRDM1-201ENST00000369089 A6NDX4 124 aa7.34□□□□□ -1.24
PRDM1-201ENST00000369089 RANBP2P49792 3224 aaKnown RBP7.33□□□□□ -1.24
PRDM1-201ENST00000369089 F8W735 103 aaPredicted RBP7.33□□□□□ -1.24
PRDM1-201ENST00000369089 C16orf74Q96GX8 76 aa7.33□□□□□ -1.24
PRDM1-201ENST00000369089 IGKV2-28A0A075B6P5 120 aa7.33□□□□□ -1.24
PRDM1-201ENST00000369089 IGKV2D-28P01615 120 aa7.33□□□□□ -1.24
PRDM1-201ENST00000369089 K7EQG2 157 aa7.33□□□□□ -1.24
PRDM1-201ENST00000369089 LINC01006Q8NI28 216 aa7.33□□□□□ -1.24
PRDM1-201ENST00000369089 OBSCN-AS1Q96MR7 158 aa7.33□□□□□ -1.24
PRDM1-201ENST00000369089 H3BPC8 53 aa7.32□□□□□ -1.24
PRDM1-201ENST00000369089 FASNP49327 2511 aaKnown RBP7.32□□□□□ -1.24
PRDM1-201ENST00000369089 FN1P02751 2386 aaKnown RBP7.32□□□□□ -1.24
PRDM1-201ENST00000369089 LINC00959A0A1B0GUT2 108 aa7.32□□□□□ -1.24
PRDM1-201ENST00000369089 C9orf129Q5T035 196 aaKnown RBP7.32□□□□□ -1.24
PRDM1-201ENST00000369089 XAGE1AQ9HD64 81 aa7.31□□□□□ -1.24
PRDM1-201ENST00000369089 CHCHD10Q8WYQ3 142 aaPredicted RBP7.31□□□□□ -1.24
PRDM1-201ENST00000369089 MRGPRG-AS1Q2M3A8 158 aa7.3□□□□□ -1.24
PRDM1-201ENST00000369089 PCOTHQ58A44 107 aa7.3□□□□□ -1.24
PRDM1-201ENST00000369089 C1orf137Q5JT78 98 aa7.3□□□□□ -1.24
PRDM1-201ENST00000369089 ZNF462Q96JM2 2506 aa7.29□□□□□ -1.24
PRDM1-201ENST00000369089 Q6ZRP5 223 aa7.29□□□□□ -1.24
PRDM1-201ENST00000369089 EPG5Q9HCE0 2579 aa7.29□□□□□ -1.24
PRDM1-201ENST00000369089 MTORP42345 2549 aa7.29□□□□□ -1.24
PRDM1-201ENST00000369089 DHRS4-AS1Q9P1J3 65 aa7.29□□□□□ -1.24
PRDM1-201ENST00000369089 AVPP01185 164 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms