RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 BAALC-AS2P0C853 105 aa12.53□□□□□ -0.4
UBQLN4-201ENST00000368309 SS18Q15532 418 aa12.53□□□□□ -0.4
UBQLN4-201ENST00000368309 SMIM9A6NGZ8 99 aa12.52□□□□□ -0.4
UBQLN4-201ENST00000368309 IBA57-AS1B1ANH7 110 aa12.52□□□□□ -0.4
UBQLN4-201ENST00000368309 TTC32Q5I0X7 151 aa12.52□□□□□ -0.41
UBQLN4-201ENST00000368309 C9orf66Q5T8R8 295 aa12.52□□□□□ -0.41
UBQLN4-201ENST00000368309 GAGE2BQ13066 116 aa12.51□□□□□ -0.41
UBQLN4-201ENST00000368309 GAGE2EQ4V326 116 aa12.51□□□□□ -0.41
UBQLN4-201ENST00000368309 GAGE2DQ9UEU5 116 aa12.51□□□□□ -0.41
UBQLN4-201ENST00000368309 A0A1B0GUV1 79 aa12.51□□□□□ -0.41
UBQLN4-201ENST00000368309 SMIM11BQ8TCY0 68 aa12.51□□□□□ -0.41
UBQLN4-201ENST00000368309 RPL28P46779 137 aaKnown RBP12.5□□□□□ -0.41
UBQLN4-201ENST00000368309 LINC00269Q8N2A0 174 aa12.5□□□□□ -0.41
UBQLN4-201ENST00000368309 IGLV10-54A0A075B6I4 117 aa12.5□□□□□ -0.41
UBQLN4-201ENST00000368309 DEFB121Q5J5C9 76 aa12.5□□□□□ -0.41
UBQLN4-201ENST00000368309 HIVEP1P15822 2718 aa12.5□□□□□ -0.41
UBQLN4-201ENST00000368309 TRACP01848 142 aa12.5□□□□□ -0.41
UBQLN4-201ENST00000368309 IGHV4-28A0A0C4DH34 117 aa12.49□□□□□ -0.41
UBQLN4-201ENST00000368309 OR13C6PQ8NH95 151 aa12.49□□□□□ -0.41
UBQLN4-201ENST00000368309 PPDPFQ9H3Y8 114 aa12.49□□□□□ -0.41
UBQLN4-201ENST00000368309 TEP1Q99973 2627 aaKnown RBP12.49□□□□□ -0.41
UBQLN4-201ENST00000368309 LYRM9A8MSI8 78 aa12.48□□□□□ -0.41
UBQLN4-201ENST00000368309 CELA1Q9UNI1 258 aa12.47□□□□□ -0.41
UBQLN4-201ENST00000368309 C22orf24Q9Y442 160 aa12.47□□□□□ -0.41
UBQLN4-201ENST00000368309 TRAV26-1A0A087WT03 109 aa12.46□□□□□ -0.41
UBQLN4-201ENST00000368309 HTN3P15516 51 aa12.46□□□□□ -0.41
UBQLN4-201ENST00000368309 DAD1P61803 113 aa12.46□□□□□ -0.41
UBQLN4-201ENST00000368309 ANAPC13Q9BS18 74 aa12.46□□□□□ -0.41
UBQLN4-201ENST00000368309 A0A087WYN8 130 aa12.46□□□□□ -0.41
UBQLN4-201ENST00000368309 ANGP03950 147 aaKnown RBP12.46□□□□□ -0.41
UBQLN4-201ENST00000368309 ATP5G1P05496 136 aa12.46□□□□□ -0.41
UBQLN4-201ENST00000368309 PRR3P79522 188 aaKnown RBP12.44□□□□□ -0.42
UBQLN4-201ENST00000368309 APOC4P55056 127 aa12.44□□□□□ -0.42
UBQLN4-201ENST00000368309 Q8IZM0 81 aa12.44□□□□□ -0.42
UBQLN4-201ENST00000368309 FAM240AA0A1B0GVK7 77 aa12.43□□□□□ -0.42
UBQLN4-201ENST00000368309 CHCHD10Q8WYQ3 142 aaPredicted RBP12.43□□□□□ -0.42
UBQLN4-201ENST00000368309 REG3AQ06141 175 aa12.42□□□□□ -0.42
UBQLN4-201ENST00000368309 DNAL4O96015 105 aa12.41□□□□□ -0.42
UBQLN4-201ENST00000368309 MALP21145 153 aa12.41□□□□□ -0.42
UBQLN4-201ENST00000368309 C9orf116Q5BN46 136 aaPredicted RBP12.41□□□□□ -0.42
UBQLN4-201ENST00000368309 CD164L2Q6UWJ8 174 aa12.41□□□□□ -0.42
UBQLN4-201ENST00000368309 NHLRC4P0CG21 123 aaPredicted RBP12.4□□□□□ -0.42
UBQLN4-201ENST00000368309 NDUFV3P56181 108 aaKnown RBP12.4□□□□□ -0.42
UBQLN4-201ENST00000368309 Q8NAQ8 132 aa12.4□□□□□ -0.42
UBQLN4-201ENST00000368309 LECT2O14960 151 aa12.39□□□□□ -0.43
UBQLN4-201ENST00000368309 KIAA0087Q14695 138 aa12.39□□□□□ -0.43
UBQLN4-201ENST00000368309 C9orf129Q5T035 196 aaKnown RBP12.39□□□□□ -0.43
UBQLN4-201ENST00000368309 SLPIP03973 132 aa12.38□□□□□ -0.43
UBQLN4-201ENST00000368309 CFAP161Q6P656 301 aa12.38□□□□□ -0.43
UBQLN4-201ENST00000368309 H0YGX0 51 aa12.37□□□□□ -0.43
UBQLN4-201ENST00000368309 SMCR5Q8TEV8 140 aa12.37□□□□□ -0.43
UBQLN4-201ENST00000368309 LINC00526Q96FQ7 95 aa12.37□□□□□ -0.43
UBQLN4-201ENST00000368309 IGHV4-30-4P0DP06 118 aa12.36□□□□□ -0.43
UBQLN4-201ENST00000368309 Q6Q795 121 aa12.36□□□□□ -0.43
UBQLN4-201ENST00000368309 SPART-AS1P0CW21 52 aa12.36□□□□□ -0.43
UBQLN4-201ENST00000368309 GAGE2AQ6NT46 116 aa12.36□□□□□ -0.43
UBQLN4-201ENST00000368309 MIFP14174 115 aa12.35□□□□□ -0.43
UBQLN4-201ENST00000368309 MRPL23Q16540 153 aaKnown RBP12.35□□□□□ -0.43
UBQLN4-201ENST00000368309 ACYP1P07311 99 aa12.35□□□□□ -0.43
UBQLN4-201ENST00000368309 C6orf223Q8N319 242 aa12.34□□□□□ -0.43
UBQLN4-201ENST00000368309 LINC01561Q8N1V8 128 aa12.34□□□□□ -0.43
UBQLN4-201ENST00000368309 KLK12Q9UKR0 248 aa12.33□□□□□ -0.44
UBQLN4-201ENST00000368309 C14orf132Q9NPU4 83 aa12.32□□□□□ -0.44
UBQLN4-201ENST00000368309 INAFM2P0DMQ5 153 aa12.32□□□□□ -0.44
UBQLN4-201ENST00000368309 C10orf25Q5T742 122 aa12.32□□□□□ -0.44
UBQLN4-201ENST00000368309 NANOS2P60321 138 aaKnown RBP12.31□□□□□ -0.44
UBQLN4-201ENST00000368309 UNQ6190/PRO20217Q6UXQ8 127 aa12.31□□□□□ -0.44
UBQLN4-201ENST00000368309 Q8NDZ9 215 aa12.3□□□□□ -0.44
UBQLN4-201ENST00000368309 NCR3O14931 201 aa12.3□□□□□ -0.44
UBQLN4-201ENST00000368309 LELP1Q5T871 98 aa12.3□□□□□ -0.44
UBQLN4-201ENST00000368309 CXCL5P42830 114 aa12.29□□□□□ -0.44
UBQLN4-201ENST00000368309 WFDC9Q8NEX5 89 aa12.29□□□□□ -0.44
UBQLN4-201ENST00000368309 PKD1L1Q8TDX9 2849 aa12.28□□□□□ -0.44
UBQLN4-201ENST00000368309 COX17Q14061 63 aa12.28□□□□□ -0.44
UBQLN4-201ENST00000368309 TRBV7-7A0A0K0K1E9 115 aa12.28□□□□□ -0.44
UBQLN4-201ENST00000368309 CCDC179H3BU77 68 aa12.28□□□□□ -0.44
UBQLN4-201ENST00000368309 SPAG11BQ08648 103 aa12.28□□□□□ -0.44
UBQLN4-201ENST00000368309 OXLD1Q5BKU9 147 aa12.27□□□□□ -0.44
UBQLN4-201ENST00000368309 B5MCH6 92 aa12.27□□□□□ -0.45
UBQLN4-201ENST00000368309 LINC00643Q86TS7 51 aa12.27□□□□□ -0.45
UBQLN4-201ENST00000368309 RETNQ9HD89 108 aa12.26□□□□□ -0.45
UBQLN4-201ENST00000368309 CYSRT1A8MQ03 144 aa12.26□□□□□ -0.45
UBQLN4-201ENST00000368309 TMEM126AQ9H061 195 aa12.26□□□□□ -0.45
UBQLN4-201ENST00000368309 ENHOQ6UWT2 76 aa12.25□□□□□ -0.45
UBQLN4-201ENST00000368309 NDUFC2O95298 119 aa12.25□□□□□ -0.45
UBQLN4-201ENST00000368309 ORMDL1Q9P0S3 153 aa12.25□□□□□ -0.45
UBQLN4-201ENST00000368309 F8P00451 2351 aa12.25□□□□□ -0.45
UBQLN4-201ENST00000368309 LYPD5Q6UWN5 251 aa12.24□□□□□ -0.45
UBQLN4-201ENST00000368309 KLK5Q9Y337 293 aaPredicted RBP12.24□□□□□ -0.45
UBQLN4-201ENST00000368309 SDIM1Q6ZPB5 146 aa12.23□□□□□ -0.45
UBQLN4-201ENST00000368309 FLNBO75369 2602 aaKnown RBP12.23□□□□□ -0.45
UBQLN4-201ENST00000368309 C6orf99Q4VX62 202 aa12.23□□□□□ -0.45
UBQLN4-201ENST00000368309 FAM236AA0A1B0GUQ0 79 aa12.23□□□□□ -0.45
UBQLN4-201ENST00000368309 FAM236BA0A1B0GV22 79 aa12.23□□□□□ -0.45
UBQLN4-201ENST00000368309 S100A7L2Q5SY68 101 aa12.23□□□□□ -0.45
UBQLN4-201ENST00000368309 PRR34Q9NV39 138 aa12.23□□□□□ -0.45
UBQLN4-201ENST00000368309 Q8N814 137 aa12.22□□□□□ -0.45
UBQLN4-201ENST00000368309 OBSCN-AS1Q96MR7 158 aa12.22□□□□□ -0.45
UBQLN4-201ENST00000368309 STAB1Q9NY15 2570 aa12.21□□□□□ -0.46
UBQLN4-201ENST00000368309 LINC00846Q9NV44 126 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms