RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 CD164L2Q6UWJ8 174 aa12.23□□□□□ -0.45
LMNA-204ENST00000368298 FUSP35637 526 aaKnown RBP eCLIP12.22□□□□□ -0.45
LMNA-204ENST00000368298 ORAOV1Q8WV07 137 aa12.22□□□□□ -0.45
LMNA-204ENST00000368298 GEMIN7Q9H840 131 aaKnown RBP12.22□□□□□ -0.45
LMNA-204ENST00000368298 HERC2O95714 4834 aa12.22□□□□□ -0.45
LMNA-204ENST00000368298 IGLV5-52A0A0A0MRZ9 124 aa12.21□□□□□ -0.45
LMNA-204ENST00000368298 J3QQQ9 107 aa12.21□□□□□ -0.45
LMNA-204ENST00000368298 LGALS3P17931 250 aaKnown RBP12.21□□□□□ -0.45
LMNA-204ENST00000368298 XCL1P47992 114 aa12.21□□□□□ -0.45
LMNA-204ENST00000368298 PLEKHB2Q96CS7 222 aa12.21□□□□□ -0.45
LMNA-204ENST00000368298 KIAA1109Q2LD37 5005 aa12.21□□□□□ -0.45
LMNA-204ENST00000368298 TRAV13-1A0A0B4J241 112 aa12.21□□□□□ -0.46
LMNA-204ENST00000368298 SEC11AP67812 179 aa12.21□□□□□ -0.46
LMNA-204ENST00000368298 LINC00469Q8N7U9 141 aa12.21□□□□□ -0.46
LMNA-204ENST00000368298 IGHV3-64A0A075B6Q5 118 aa12.2□□□□□ -0.46
LMNA-204ENST00000368298 CFAP161Q6P656 301 aa12.2□□□□□ -0.46
LMNA-204ENST00000368298 FAM19A3Q7Z5A8 133 aa12.2□□□□□ -0.46
LMNA-204ENST00000368298 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.19□□□□□ -0.46
LMNA-204ENST00000368298 GCSHP23434 173 aa12.19□□□□□ -0.46
LMNA-204ENST00000368298 TAL2Q16559 108 aa12.19□□□□□ -0.46
LMNA-204ENST00000368298 IGLV5-45A0A087WSX0 123 aa12.18□□□□□ -0.46
LMNA-204ENST00000368298 C15orf56Q8N910 161 aa12.18□□□□□ -0.46
LMNA-204ENST00000368298 DNAH5Q8TE73 4624 aa12.17□□□□□ -0.46
LMNA-204ENST00000368298 H3BRM9 83 aa12.17□□□□□ -0.46
LMNA-204ENST00000368298 SPINK8P0C7L1 97 aa12.17□□□□□ -0.46
LMNA-204ENST00000368298 HERVK_113P63121 156 aa12.17□□□□□ -0.46
LMNA-204ENST00000368298 COX6A2Q02221 97 aa12.17□□□□□ -0.46
LMNA-204ENST00000368298 LINC00242Q5T6M2 205 aa12.17□□□□□ -0.46
LMNA-204ENST00000368298 SCGB1D4Q6XE38 83 aa12.17□□□□□ -0.46
LMNA-204ENST00000368298 IGHV1-58A0A0C4DH39 117 aa12.16□□□□□ -0.46
LMNA-204ENST00000368298 A6NDN8 102 aa12.16□□□□□ -0.46
LMNA-204ENST00000368298 CEND1Q8N111 149 aa12.16□□□□□ -0.46
LMNA-204ENST00000368298 HIST1H4GQ99525 98 aa12.16□□□□□ -0.46
LMNA-204ENST00000368298 CDKN2A-AS1Q9UH64 79 aa12.16□□□□□ -0.46
LMNA-204ENST00000368298 IGHV3OR16-9A0A0B4J2B5 98 aa12.15□□□□□ -0.46
LMNA-204ENST00000368298 KRTAP10-1P60331 282 aa12.15□□□□□ -0.46
LMNA-204ENST00000368298 GVQW2A0A096LPI5 108 aaPredicted RBP12.14□□□□□ -0.47
LMNA-204ENST00000368298 COX7A2LO14548 114 aa12.14□□□□□ -0.47
LMNA-204ENST00000368298 TAX1BP3O14907 124 aa12.14□□□□□ -0.47
LMNA-204ENST00000368298 FXYD2P54710 66 aa12.14□□□□□ -0.47
LMNA-204ENST00000368298 CNBPP62633 177 aaKnown RBP12.14□□□□□ -0.47
LMNA-204ENST00000368298 LRP1BQ9NZR2 4599 aa12.14□□□□□ -0.47
LMNA-204ENST00000368298 CDK2AP2O75956 126 aa12.14□□□□□ -0.47
LMNA-204ENST00000368298 Q6ZVH6 145 aa12.13□□□□□ -0.47
LMNA-204ENST00000368298 PTTG1IPP53801 180 aa12.12□□□□□ -0.47
LMNA-204ENST00000368298 SLPIP03973 132 aa12.11□□□□□ -0.47
LMNA-204ENST00000368298 C9orf163Q8N9P6 203 aa12.11□□□□□ -0.47
LMNA-204ENST00000368298 C5orf38Q86SI9 138 aa12.1□□□□□ -0.47
LMNA-204ENST00000368298 SPANXB1Q9NS25 103 aaPredicted RBP12.1□□□□□ -0.47
LMNA-204ENST00000368298 MALP21145 153 aa12.09□□□□□ -0.47
LMNA-204ENST00000368298 SRSF9Q13242 221 aaKnown RBP eCLIP12.09□□□□□ -0.47
LMNA-204ENST00000368298 HIGD2BQ4VC39 106 aa12.09□□□□□ -0.47
LMNA-204ENST00000368298 NDUFA12Q9UI09 145 aa12.09□□□□□ -0.47
LMNA-204ENST00000368298 A0A087WZ39 114 aa12.08□□□□□ -0.47
LMNA-204ENST00000368298 IGLV5-39A0A0G2JS06 123 aa12.08□□□□□ -0.47
LMNA-204ENST00000368298 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.08□□□□□ -0.48
LMNA-204ENST00000368298 SMIM1B2RUZ4 78 aa12.08□□□□□ -0.48
LMNA-204ENST00000368298 APOMO95445 188 aa12.08□□□□□ -0.48
LMNA-204ENST00000368298 SMIM13P0DJ93 91 aa12.08□□□□□ -0.48
LMNA-204ENST00000368298 Q6ZSA8 131 aa12.08□□□□□ -0.48
LMNA-204ENST00000368298 LINC01561Q8N1V8 128 aa12.08□□□□□ -0.48
LMNA-204ENST00000368298 A0A0J9YXY3 114 aa12.07□□□□□ -0.48
LMNA-204ENST00000368298 LINC01620Q4KN68 170 aa12.07□□□□□ -0.48
LMNA-204ENST00000368298 NHP2Q9NX24 153 aaKnown RBP12.07□□□□□ -0.48
LMNA-204ENST00000368298 ZNF561-AS1K7EIQ3 104 aa12.05□□□□□ -0.48
LMNA-204ENST00000368298 RAB37Q96AX2 223 aa12.05□□□□□ -0.48
LMNA-204ENST00000368298 TMEM238C9JI98 176 aa12.04□□□□□ -0.48
LMNA-204ENST00000368298 NDUFA1O15239 70 aa12.04□□□□□ -0.48
LMNA-204ENST00000368298 XGP55808 180 aa12.04□□□□□ -0.48
LMNA-204ENST00000368298 SDIM1Q6ZPB5 146 aa12.04□□□□□ -0.48
LMNA-204ENST00000368298 FAM30AQ9NZY2 134 aa12.04□□□□□ -0.48
LMNA-204ENST00000368298 RYR1P21817 5038 aa12.04□□□□□ -0.48
LMNA-204ENST00000368298 APOBP04114 4563 aaKnown RBP12.04□□□□□ -0.48
LMNA-204ENST00000368298 C9orf118A6NHY6 69 aa12.03□□□□□ -0.48
LMNA-204ENST00000368298 K7ERJ3 54 aa12.03□□□□□ -0.48
LMNA-204ENST00000368298 C2orf48Q96LS8 159 aa12.03□□□□□ -0.48
LMNA-204ENST00000368298 TMEM238LA0A1B0GVL6 79 aa12.02□□□□□ -0.48
LMNA-204ENST00000368298 A6NJY4 79 aa12.02□□□□□ -0.48
LMNA-204ENST00000368298 LINC00526Q96FQ7 95 aa12.02□□□□□ -0.48
LMNA-204ENST00000368298 KRTAP17-1Q9BYP8 105 aa12.02□□□□□ -0.48
LMNA-204ENST00000368298 F8WDY8 70 aa12.02□□□□□ -0.49
LMNA-204ENST00000368298 HSPG2P98160 4391 aa12.01□□□□□ -0.49
LMNA-204ENST00000368298 A0A1B0GWB2 263 aa12.01□□□□□ -0.49
LMNA-204ENST00000368298 SYCNQ0VAF6 134 aa12.01□□□□□ -0.49
LMNA-204ENST00000368298 SPAG11BQ08648 103 aa12□□□□□ -0.49
LMNA-204ENST00000368298 KIAA0087Q14695 138 aa12□□□□□ -0.49
LMNA-204ENST00000368298 VAMP3Q15836 100 aa12□□□□□ -0.49
LMNA-204ENST00000368298 LITAFQ99732 161 aa12□□□□□ -0.49
LMNA-204ENST00000368298 H3BUT2 72 aa11.99□□□□□ -0.49
LMNA-204ENST00000368298 TIMM17BO60830 172 aa11.99□□□□□ -0.49
LMNA-204ENST00000368298 COX7B2Q8TF08 81 aa11.99□□□□□ -0.49
LMNA-204ENST00000368298 CARD19Q96LW7 228 aa11.99□□□□□ -0.49
LMNA-204ENST00000368298 SPANXDQ9BXN6 97 aa11.99□□□□□ -0.49
LMNA-204ENST00000368298 SPANXCQ9NY87 97 aa11.99□□□□□ -0.49
LMNA-204ENST00000368298 NAA38Q9BRA0 125 aaKnown RBP11.98□□□□□ -0.49
LMNA-204ENST00000368298 PCLOQ9Y6V0 5065 aa11.97□□□□□ -0.49
LMNA-204ENST00000368298 CIRBPQ14011 172 aaKnown RBP11.97□□□□□ -0.49
LMNA-204ENST00000368298 MUSTN1Q8IVN3 82 aa11.97□□□□□ -0.49
LMNA-204ENST00000368298 CAMK2N2Q96S95 79 aa11.97□□□□□ -0.49
LMNA-204ENST00000368298 RNF151Q2KHN1 245 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms