RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 RNASE13Q5GAN3 156 aaKnown RBP8.16□□□□□ -1.1
USF1-201ENST00000368019 MUC7Q8TAX7 377 aa8.16□□□□□ -1.1
USF1-201ENST00000368019 RYR2Q92736 4967 aa8.16□□□□□ -1.1
USF1-201ENST00000368019 A8MZ25 164 aa8.15□□□□□ -1.1
USF1-201ENST00000368019 K7EQD1 137 aa8.15□□□□□ -1.1
USF1-201ENST00000368019 CSMD3Q7Z407 3707 aa8.14□□□□□ -1.11
USF1-201ENST00000368019 CMC4P56277 68 aaPredicted RBP8.14□□□□□ -1.11
USF1-201ENST00000368019 COX6A2Q02221 97 aa8.14□□□□□ -1.11
USF1-201ENST00000368019 SOSTDC1Q6X4U4 206 aa8.14□□□□□ -1.11
USF1-201ENST00000368019 DYNLRB2Q8TF09 96 aa8.14□□□□□ -1.11
USF1-201ENST00000368019 CDC42SE2Q9NRR3 84 aa8.14□□□□□ -1.11
USF1-201ENST00000368019 SLURP1P55000 103 aa8.13□□□□□ -1.11
USF1-201ENST00000368019 NPC2P61916 151 aa8.13□□□□□ -1.11
USF1-201ENST00000368019 DEFB114Q30KQ6 69 aa8.13□□□□□ -1.11
USF1-201ENST00000368019 MEIG1Q5JSS6 88 aa8.13□□□□□ -1.11
USF1-201ENST00000368019 DNAH1Q9P2D7 4330 aa8.12□□□□□ -1.11
USF1-201ENST00000368019 LYSTQ99698 3801 aa8.12□□□□□ -1.11
USF1-201ENST00000368019 IGHV3-38A0A0C4DH36 116 aa8.12□□□□□ -1.11
USF1-201ENST00000368019 H0YGX0 51 aa8.12□□□□□ -1.11
USF1-201ENST00000368019 BAALC-AS2P0C853 105 aa8.12□□□□□ -1.11
USF1-201ENST00000368019 C5orf38Q86SI9 138 aa8.12□□□□□ -1.11
USF1-201ENST00000368019 CRPP02741 224 aa8.11□□□□□ -1.11
USF1-201ENST00000368019 HTN1P15515 57 aa8.11□□□□□ -1.11
USF1-201ENST00000368019 TMEM243Q9BU79 118 aa8.11□□□□□ -1.11
USF1-201ENST00000368019 Q9UF83 564 aa8.11□□□□□ -1.11
USF1-201ENST00000368019 LCE6AA0A183 80 aa8.1□□□□□ -1.11
USF1-201ENST00000368019 UQCRQO14949 82 aa8.1□□□□□ -1.11
USF1-201ENST00000368019 C1orf158Q8N1D5 194 aa8.1□□□□□ -1.11
USF1-201ENST00000368019 TM2D3Q9BRN9 247 aa8.1□□□□□ -1.11
USF1-201ENST00000368019 LINC00694P0DN24 101 aa8.09□□□□□ -1.11
USF1-201ENST00000368019 MALP21145 153 aa8.09□□□□□ -1.11
USF1-201ENST00000368019 NTM-AS1Q6ZSK4 140 aa8.09□□□□□ -1.11
USF1-201ENST00000368019 C3orf22Q8N5N4 141 aa8.09□□□□□ -1.11
USF1-201ENST00000368019 OBSCN-AS1Q96MR7 158 aa8.09□□□□□ -1.11
USF1-201ENST00000368019 C19orf73Q9NVV2 129 aa8.09□□□□□ -1.11
USF1-201ENST00000368019 C22orf24Q9Y442 160 aa8.09□□□□□ -1.11
USF1-201ENST00000368019 STARD9Q9P2P6 4700 aa8.09□□□□□ -1.11
USF1-201ENST00000368019 FAM236AA0A1B0GUQ0 79 aa8.08□□□□□ -1.12
USF1-201ENST00000368019 FAM236BA0A1B0GV22 79 aa8.08□□□□□ -1.12
USF1-201ENST00000368019 TRBV6-4A0A1B0GX49 114 aa8.08□□□□□ -1.12
USF1-201ENST00000368019 IBA57-AS1B1ANH7 110 aa8.08□□□□□ -1.12
USF1-201ENST00000368019 HIST1H4AP62805 103 aaKnown RBP8.08□□□□□ -1.12
USF1-201ENST00000368019 LINC01561Q8N1V8 128 aa8.08□□□□□ -1.12
USF1-201ENST00000368019 COX7B2Q8TF08 81 aa8.08□□□□□ -1.12
USF1-201ENST00000368019 LINC00526Q96FQ7 95 aa8.08□□□□□ -1.12
USF1-201ENST00000368019 EPPK1P58107 5090 aaKnown RBP8.08□□□□□ -1.12
USF1-201ENST00000368019 A0A1B0GX51 115 aa8.07□□□□□ -1.12
USF1-201ENST00000368019 UBE2L6O14933 153 aa8.07□□□□□ -1.12
USF1-201ENST00000368019 IGLV1-51P01701 117 aa8.07□□□□□ -1.12
USF1-201ENST00000368019 ODF3L2Q3SX64 289 aa8.07□□□□□ -1.12
USF1-201ENST00000368019 Q6JHZ5 121 aa8.07□□□□□ -1.12
USF1-201ENST00000368019 STHQ8IWL8 128 aa8.07□□□□□ -1.12
USF1-201ENST00000368019 SMCR5Q8TEV8 140 aa8.07□□□□□ -1.12
USF1-201ENST00000368019 C16orf74Q96GX8 76 aa8.07□□□□□ -1.12
USF1-201ENST00000368019 TRGV1A0A0A0MS02 117 aa8.06□□□□□ -1.12
USF1-201ENST00000368019 TRAV13-1A0A0B4J241 112 aa8.06□□□□□ -1.12
USF1-201ENST00000368019 ATOX1O00244 68 aa8.06□□□□□ -1.12
USF1-201ENST00000368019 IGHV4-30-4P0DP06 118 aa8.06□□□□□ -1.12
USF1-201ENST00000368019 CHCHD5Q9BSY4 110 aa8.06□□□□□ -1.12
USF1-201ENST00000368019 COX7CP15954 63 aa8.05□□□□□ -1.12
USF1-201ENST00000368019 FAM218AQ96MZ4 157 aa8.05□□□□□ -1.12
USF1-201ENST00000368019 SND1-IT1Q9HBX3 110 aa8.05□□□□□ -1.12
USF1-201ENST00000368019 BIRC6Q9NR09 4857 aa8.04□□□□□ -1.12
USF1-201ENST00000368019 DNAL4O96015 105 aa8.04□□□□□ -1.12
USF1-201ENST00000368019 PRM2P04554 102 aa8.04□□□□□ -1.12
USF1-201ENST00000368019 MIR7-3HGQ8N6C7 128 aa8.04□□□□□ -1.12
USF1-201ENST00000368019 IGKV2-28A0A075B6P5 120 aa8.03□□□□□ -1.12
USF1-201ENST00000368019 A0A087WZ39 114 aa8.03□□□□□ -1.12
USF1-201ENST00000368019 IGKV2D-28P01615 120 aa8.03□□□□□ -1.12
USF1-201ENST00000368019 C9orf153Q5TBE3 101 aa8.03□□□□□ -1.12
USF1-201ENST00000368019 LINC00337Q8N6G1 96 aa8.03□□□□□ -1.12
USF1-201ENST00000368019 XCL2Q9UBD3 114 aa8.03□□□□□ -1.12
USF1-201ENST00000368019 KLK5Q9Y337 293 aaPredicted RBP8.03□□□□□ -1.12
USF1-201ENST00000368019 IGHV3OR16-9A0A0B4J2B5 98 aa8.02□□□□□ -1.13
USF1-201ENST00000368019 CRYGAP11844 174 aa8.02□□□□□ -1.13
USF1-201ENST00000368019 Q6ZTI0 123 aa8.02□□□□□ -1.13
USF1-201ENST00000368019 SMIM20Q8N5G0 67 aa8.02□□□□□ -1.13
USF1-201ENST00000368019 LINC00167Q96N53 147 aa8.02□□□□□ -1.13
USF1-201ENST00000368019 A0A0U1RRA0 63 aa8.01□□□□□ -1.13
USF1-201ENST00000368019 S100A7L2Q5SY68 101 aa8.01□□□□□ -1.13
USF1-201ENST00000368019 SMIM11BQ8TCY0 68 aa8.01□□□□□ -1.13
USF1-201ENST00000368019 PLAC8L1A1L4L8 177 aa8□□□□□ -1.13
USF1-201ENST00000368019 CCL18P55774 89 aa8□□□□□ -1.13
USF1-201ENST00000368019 ATP5EP2Q5VTU8 51 aa8□□□□□ -1.13
USF1-201ENST00000368019 GAGE2AQ6NT46 116 aa8□□□□□ -1.13
USF1-201ENST00000368019 C2orf48Q96LS8 159 aa8□□□□□ -1.13
USF1-201ENST00000368019 HYDINQ4G0P3 5121 aa8□□□□□ -1.13
USF1-201ENST00000368019 PLECQ15149 4684 aaKnown RBP8□□□□□ -1.13
USF1-201ENST00000368019 TRBV6-8A0A0A6YYG3 113 aa7.99□□□□□ -1.13
USF1-201ENST00000368019 LINC00158P58513 81 aa7.99□□□□□ -1.13
USF1-201ENST00000368019 RPS28P62857 69 aaKnown RBP7.99□□□□□ -1.13
USF1-201ENST00000368019 JMJD7-PLA2G4BH0Y9G9 81 aa7.98□□□□□ -1.13
USF1-201ENST00000368019 NDUFC2O95298 119 aa7.98□□□□□ -1.13
USF1-201ENST00000368019 RPL18AQ02543 176 aaKnown RBP7.98□□□□□ -1.13
USF1-201ENST00000368019 Q8IZM0 81 aa7.97□□□□□ -1.13
USF1-201ENST00000368019 NOP10Q9NPE3 64 aaKnown RBP7.97□□□□□ -1.13
USF1-201ENST00000368019 ORMDL1Q9P0S3 153 aa7.97□□□□□ -1.13
USF1-201ENST00000368019 A0A087WYN8 130 aa7.96□□□□□ -1.14
USF1-201ENST00000368019 A0A1B0GUV1 79 aa7.96□□□□□ -1.14
USF1-201ENST00000368019 LINC00612Q8N6U2 182 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms