RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 K7EP34 96 aa-0.72□□□□□ -2.52
RNU6-428P-201ENST00000362942 APOC2P02655 101 aa-0.72□□□□□ -2.52
RNU6-428P-201ENST00000362942 BTG2P78543 158 aa-0.72□□□□□ -2.52
RNU6-428P-201ENST00000362942 LINC00470Q9BZP3 86 aa-0.72□□□□□ -2.52
RNU6-428P-201ENST00000362942 UQCR10Q9UDW1 63 aa-0.72□□□□□ -2.52
RNU6-428P-201ENST00000362942 DMXL1Q9Y485 3027 aa-0.72□□□□□ -2.52
RNU6-428P-201ENST00000362942 ADGRG4Q8IZF6 3080 aa-0.73□□□□□ -2.53
RNU6-428P-201ENST00000362942 DNAH1Q9P2D7 4330 aa-0.73□□□□□ -2.53
RNU6-428P-201ENST00000362942 ANK3Q12955 4377 aaKnown RBP-0.73□□□□□ -2.53
RNU6-428P-201ENST00000362942 LOC105371267A0A1B0GV96 52 aa-0.73□□□□□ -2.53
RNU6-428P-201ENST00000362942 MIF4GDA9UHW6 222 aaKnown RBP-0.73□□□□□ -2.53
RNU6-428P-201ENST00000362942 SYS1-DBNDD2H3BUS1 97 aa-0.73□□□□□ -2.53
RNU6-428P-201ENST00000362942 COX8AP10176 69 aa-0.73□□□□□ -2.53
RNU6-428P-201ENST00000362942 COMMD6Q7Z4G1 85 aa-0.73□□□□□ -2.53
RNU6-428P-201ENST00000362942 DEFB105AQ8NG35 78 aa-0.73□□□□□ -2.53
RNU6-428P-201ENST00000362942 TSLPQ969D9 159 aa-0.73□□□□□ -2.53
RNU6-428P-201ENST00000362942 USMG5Q96IX5 58 aa-0.73□□□□□ -2.53
RNU6-428P-201ENST00000362942 LINC00846Q9NV44 126 aa-0.73□□□□□ -2.53
RNU6-428P-201ENST00000362942 NBASA2RRP1 2371 aa-0.73□□□□□ -2.53
RNU6-428P-201ENST00000362942 MYO15AQ9UKN7 3530 aa-0.73□□□□□ -2.53
RNU6-428P-201ENST00000362942 AKAP9Q99996 3911 aa-0.73□□□□□ -2.53
RNU6-428P-201ENST00000362942 SETBP1Q9Y6X0 1596 aa-0.74□□□□□ -2.53
RNU6-428P-201ENST00000362942 KALRNO60229 2985 aa-0.74□□□□□ -2.53
RNU6-428P-201ENST00000362942 KNDC1Q76NI1 1749 aa-0.74□□□□□ -2.53
RNU6-428P-201ENST00000362942 FGF7P21781 194 aa-0.74□□□□□ -2.53
RNU6-428P-201ENST00000362942 DEFB1P60022 68 aa-0.74□□□□□ -2.53
RNU6-428P-201ENST00000362942 CATR1Q13166 79 aa-0.74□□□□□ -2.53
RNU6-428P-201ENST00000362942 CCDC58Q4VC31 144 aa-0.74□□□□□ -2.53
RNU6-428P-201ENST00000362942 NXT2Q9NPJ8 142 aaKnown RBP-0.74□□□□□ -2.53
RNU6-428P-201ENST00000362942 FOCADQ5VW36 1801 aa-0.74□□□□□ -2.53
RNU6-428P-201ENST00000362942 RELNP78509 3460 aa-0.74□□□□□ -2.53
RNU6-428P-201ENST00000362942 NSD3Q9BZ95 1437 aa-0.74□□□□□ -2.53
RNU6-428P-201ENST00000362942 VPS13DQ5THJ4 4388 aa-0.74□□□□□ -2.53
RNU6-428P-201ENST00000362942 TULP4Q9NRJ4 1543 aa-0.74□□□□□ -2.53
RNU6-428P-201ENST00000362942 PHLPP1O60346 1717 aa-0.75□□□□□ -2.53
RNU6-428P-201ENST00000362942 SPG11Q96JI7 2443 aa-0.75□□□□□ -2.53
RNU6-428P-201ENST00000362942 COL14A1Q05707 1796 aaKnown RBP-0.75□□□□□ -2.53
RNU6-428P-201ENST00000362942 APOBP04114 4563 aaKnown RBP-0.75□□□□□ -2.53
RNU6-428P-201ENST00000362942 UBA52P62987 128 aaKnown RBP-0.75□□□□□ -2.53
RNU6-428P-201ENST00000362942 MT1HP80294 61 aa-0.75□□□□□ -2.53
RNU6-428P-201ENST00000362942 C5orf38Q86SI9 138 aa-0.75□□□□□ -2.53
RNU6-428P-201ENST00000362942 FRYQ5TBA9 3013 aa-0.75□□□□□ -2.53
RNU6-428P-201ENST00000362942 TRIOO75962 3097 aa-0.75□□□□□ -2.53
RNU6-428P-201ENST00000362942 PRUNE2Q8WUY3 3088 aa-0.75□□□□□ -2.53
RNU6-428P-201ENST00000362942 SMG6Q86US8 1419 aaKnown RBP-0.75□□□□□ -2.53
RNU6-428P-201ENST00000362942 MAGI1Q96QZ7 1491 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-428P-201ENST00000362942 BICRAQ9NZM4 1560 aa-0.75□□□□□ -2.53
RNU6-428P-201ENST00000362942 DYNC1H1Q14204 4646 aaKnown RBP-0.76□□□□□ -2.53
RNU6-428P-201ENST00000362942 H0YAA0 97 aa-0.76□□□□□ -2.53
RNU6-428P-201ENST00000362942 CHKB-CPT1BH3BT56 60 aa-0.76□□□□□ -2.53
RNU6-428P-201ENST00000362942 MT1BP07438 61 aa-0.76□□□□□ -2.53
RNU6-428P-201ENST00000362942 C10orf113Q5VZT2 155 aa-0.76□□□□□ -2.53
RNU6-428P-201ENST00000362942 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-428P-201ENST00000362942 SPRR4Q96PI1 79 aa-0.76□□□□□ -2.53
RNU6-428P-201ENST00000362942 KIAA0556O60303 1618 aa-0.76□□□□□ -2.53
RNU6-428P-201ENST00000362942 VPS13BQ7Z7G8 4022 aa-0.76□□□□□ -2.53
RNU6-428P-201ENST00000362942 DNAH7Q8WXX0 4024 aa-0.76□□□□□ -2.53
RNU6-428P-201ENST00000362942 GNG7O60262 68 aa-0.77□□□□□ -2.53
RNU6-428P-201ENST00000362942 IGLC1P0CG04 106 aa-0.77□□□□□ -2.53
RNU6-428P-201ENST00000362942 DEFB135Q30KP9 77 aa-0.77□□□□□ -2.53
RNU6-428P-201ENST00000362942 FDCSPQ8NFU4 85 aa-0.77□□□□□ -2.53
RNU6-428P-201ENST00000362942 PRO1933Q9H354 126 aa-0.77□□□□□ -2.53
RNU6-428P-201ENST00000362942 ACACBO00763 2458 aa-0.77□□□□□ -2.53
RNU6-428P-201ENST00000362942 CMYA5Q8N3K9 4069 aa-0.77□□□□□ -2.53
RNU6-428P-201ENST00000362942 SHROOM2Q13796 1616 aa-0.78□□□□□ -2.53
RNU6-428P-201ENST00000362942 SPTA1P02549 2419 aa-0.78□□□□□ -2.53
RNU6-428P-201ENST00000362942 KTN1Q86UP2 1357 aaKnown RBP-0.78□□□□□ -2.53
RNU6-428P-201ENST00000362942 ATMQ13315 3056 aa-0.78□□□□□ -2.53
RNU6-428P-201ENST00000362942 BPTFQ12830 3046 aa-0.78□□□□□ -2.53
RNU6-428P-201ENST00000362942 H0YGG7 62 aa-0.78□□□□□ -2.53
RNU6-428P-201ENST00000362942 H3BNG1 76 aa-0.78□□□□□ -2.53
RNU6-428P-201ENST00000362942 MT1XP80297 61 aa-0.78□□□□□ -2.53
RNU6-428P-201ENST00000362942 SMG1Q96Q15 3661 aaKnown RBP-0.78□□□□□ -2.53
RNU6-428P-201ENST00000362942 TLN2Q9Y4G6 2542 aa-0.78□□□□□ -2.53
RNU6-428P-201ENST00000362942 A0A0G2JMZ2 1700 aa-0.78□□□□□ -2.53
RNU6-428P-201ENST00000362942 FAM186AA6NE01 2351 aa-0.78□□□□□ -2.53
RNU6-428P-201ENST00000362942 GOLGA4Q13439 2230 aaKnown RBP-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 DNAH5Q8TE73 4624 aa-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 PKD1P98161 4303 aa-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 ANKRD50Q9ULJ7 1429 aa-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 REV3LO60673 3130 aa-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 LINC00959A0A1B0GUT2 108 aa-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 MT1AP04731 61 aa-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 FAM167A-AS1Q96KT0 104 aa-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 TSC22D3Q99576 134 aa-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 CDC42SE2Q9NRR3 84 aa-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 ARL2-SNX15V9GYD0 113 aa-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 PRKDCP78527 4128 aaKnown RBP-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 TRANK1O15050 2925 aa-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 ARHGEF5Q12774 1597 aa-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 SACSQ9NZJ4 4579 aa-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 SPENQ96T58 3664 aaKnown RBP-0.79□□□□□ -2.54
RNU6-428P-201ENST00000362942 KNL1Q8NG31 2342 aa-0.8□□□□□ -2.54
RNU6-428P-201ENST00000362942 CCDC141Q6ZP82 1450 aa-0.8□□□□□ -2.54
RNU6-428P-201ENST00000362942 UBE2L5PA0A1B0GUS4 154 aa-0.8□□□□□ -2.54
RNU6-428P-201ENST00000362942 F6UZH7 168 aa-0.8□□□□□ -2.54
RNU6-428P-201ENST00000362942 ATP5EP56381 51 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-428P-201ENST00000362942 UBE2L3P68036 154 aaKnown RBP-0.8□□□□□ -2.54
RNU6-428P-201ENST00000362942 FAM223AQ8IWN6 122 aa-0.8□□□□□ -2.54
RNU6-428P-201ENST00000362942 C1orf54Q8WWF1 131 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms