RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 LINC00959A0A1B0GUT2 108 aa9.96□□□□□ -0.81
COL6A1-201ENST00000361866 SERP2Q8N6R1 65 aa9.96□□□□□ -0.81
COL6A1-201ENST00000361866 CSDC2Q9Y534 153 aaKnown RBP9.96□□□□□ -0.81
COL6A1-201ENST00000361866 C9orf116Q5BN46 136 aaPredicted RBP9.96□□□□□ -0.82
COL6A1-201ENST00000361866 NDUFC2O95298 119 aa9.95□□□□□ -0.82
COL6A1-201ENST00000361866 MPLKIPQ8TAP9 179 aa9.95□□□□□ -0.82
COL6A1-201ENST00000361866 FAM236DA0A1B0GTK5 79 aa9.95□□□□□ -0.82
COL6A1-201ENST00000361866 FAM236CP0DP71 79 aa9.95□□□□□ -0.82
COL6A1-201ENST00000361866 KRTAP10-9P60411 292 aa9.95□□□□□ -0.82
COL6A1-201ENST00000361866 DIRC1Q969H9 104 aa9.95□□□□□ -0.82
COL6A1-201ENST00000361866 SPART-AS1P0CW21 52 aa9.95□□□□□ -0.82
COL6A1-201ENST00000361866 LRBAP50851 2863 aa9.94□□□□□ -0.82
COL6A1-201ENST00000361866 F8WEM9 126 aa9.94□□□□□ -0.82
COL6A1-201ENST00000361866 EIF4EBP3O60516 100 aaPredicted RBP9.94□□□□□ -0.82
COL6A1-201ENST00000361866 ZNF575Q86XF7 245 aa9.94□□□□□ -0.82
COL6A1-201ENST00000361866 LINC00337Q8N6G1 96 aa9.94□□□□□ -0.82
COL6A1-201ENST00000361866 NREPQ16612 68 aa9.94□□□□□ -0.82
COL6A1-201ENST00000361866 Q6ZQY7 126 aa9.94□□□□□ -0.82
COL6A1-201ENST00000361866 SBSPONQ8IVN8 264 aa9.93□□□□□ -0.82
COL6A1-201ENST00000361866 SOSTDC1Q6X4U4 206 aa9.92□□□□□ -0.82
COL6A1-201ENST00000361866 DCHS1Q96JQ0 3298 aa9.92□□□□□ -0.82
COL6A1-201ENST00000361866 RPL28P46779 137 aaKnown RBP9.92□□□□□ -0.82
COL6A1-201ENST00000361866 SNURFQ9Y675 71 aa9.92□□□□□ -0.82
COL6A1-201ENST00000361866 ASPMQ8IZT6 3477 aa9.91□□□□□ -0.82
COL6A1-201ENST00000361866 LINC00846Q9NV44 126 aa9.91□□□□□ -0.82
COL6A1-201ENST00000361866 BRI3O95415 125 aa9.9□□□□□ -0.82
COL6A1-201ENST00000361866 NTM-AS1Q6ZSK4 140 aa9.9□□□□□ -0.82
COL6A1-201ENST00000361866 LINC01006Q8NI28 216 aa9.9□□□□□ -0.82
COL6A1-201ENST00000361866 FAM218AQ96MZ4 157 aa9.9□□□□□ -0.82
COL6A1-201ENST00000361866 MUC3AQ02505 3323 aa9.89□□□□□ -0.83
COL6A1-201ENST00000361866 A8MTW9 85 aa9.89□□□□□ -0.83
COL6A1-201ENST00000361866 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.89□□□□□ -0.83
COL6A1-201ENST00000361866 BEAN1Q3B7T3 259 aa9.89□□□□□ -0.83
COL6A1-201ENST00000361866 C11orf72Q8NBR9 251 aa9.89□□□□□ -0.83
COL6A1-201ENST00000361866 PSCAO43653 123 aa9.88□□□□□ -0.83
COL6A1-201ENST00000361866 COX7BP24311 80 aa9.88□□□□□ -0.83
COL6A1-201ENST00000361866 UBE2BP63146 152 aa9.88□□□□□ -0.83
COL6A1-201ENST00000361866 FLNAP21333 2647 aaKnown RBP9.88□□□□□ -0.83
COL6A1-201ENST00000361866 V9GYY9 64 aa9.87□□□□□ -0.83
COL6A1-201ENST00000361866 COL12A1Q99715 3063 aa9.87□□□□□ -0.83
COL6A1-201ENST00000361866 FUSP35637 526 aaKnown RBP eCLIP9.87□□□□□ -0.83
COL6A1-201ENST00000361866 C9orf66Q5T8R8 295 aa9.87□□□□□ -0.83
COL6A1-201ENST00000361866 LITAFQ99732 161 aa9.87□□□□□ -0.83
COL6A1-201ENST00000361866 ETDCA0A1B0GVM5 59 aa9.87□□□□□ -0.83
COL6A1-201ENST00000361866 INAFM1C9JVW0 142 aa9.87□□□□□ -0.83
COL6A1-201ENST00000361866 UNQ6190/PRO20217Q6UXQ8 127 aa9.87□□□□□ -0.83
COL6A1-201ENST00000361866 A0A087WZ39 114 aa9.86□□□□□ -0.83
COL6A1-201ENST00000361866 IGLV5-39A0A0G2JS06 123 aa9.86□□□□□ -0.83
COL6A1-201ENST00000361866 CD164L2Q6UWJ8 174 aa9.86□□□□□ -0.83
COL6A1-201ENST00000361866 FAM19A1Q7Z5A9 133 aa9.86□□□□□ -0.83
COL6A1-201ENST00000361866 HILS1P60008 231 aa9.85□□□□□ -0.83
COL6A1-201ENST00000361866 Q6JHZ5 121 aa9.84□□□□□ -0.83
COL6A1-201ENST00000361866 TRBV7-7A0A0K0K1E9 115 aa9.84□□□□□ -0.83
COL6A1-201ENST00000361866 C3orf84H3BNL1 204 aa9.84□□□□□ -0.83
COL6A1-201ENST00000361866 NHLRC4P0CG21 123 aaPredicted RBP9.83□□□□□ -0.84
COL6A1-201ENST00000361866 FHL2Q14192 279 aa9.82□□□□□ -0.84
COL6A1-201ENST00000361866 Q8N814 137 aa9.82□□□□□ -0.84
COL6A1-201ENST00000361866 BPY2O14599 106 aa9.82□□□□□ -0.84
COL6A1-201ENST00000361866 CCKP06307 115 aa9.82□□□□□ -0.84
COL6A1-201ENST00000361866 Q8IZM0 81 aa9.82□□□□□ -0.84
COL6A1-201ENST00000361866 CYSRT1A8MQ03 144 aa9.82□□□□□ -0.84
COL6A1-201ENST00000361866 UBE2DNLQ8IWF7 75 aa9.82□□□□□ -0.84
COL6A1-201ENST00000361866 ITPR3Q14573 2671 aa9.82□□□□□ -0.84
COL6A1-201ENST00000361866 ATP5EP2Q5VTU8 51 aa9.81□□□□□ -0.84
COL6A1-201ENST00000361866 CFAP46Q8IYW2 2715 aa9.81□□□□□ -0.84
COL6A1-201ENST00000361866 IGKV2-28A0A075B6P5 120 aa9.8□□□□□ -0.84
COL6A1-201ENST00000361866 IGKV2D-28P01615 120 aa9.8□□□□□ -0.84
COL6A1-201ENST00000361866 PDE6GP18545 87 aa9.8□□□□□ -0.84
COL6A1-201ENST00000361866 NDUFC2-KCTD14E9PQ53 114 aa9.8□□□□□ -0.84
COL6A1-201ENST00000361866 ATRQ13535 2644 aa9.8□□□□□ -0.84
COL6A1-201ENST00000361866 C6orf223Q8N319 242 aa9.8□□□□□ -0.84
COL6A1-201ENST00000361866 IGHV3OR16-9A0A0B4J2B5 98 aa9.8□□□□□ -0.84
COL6A1-201ENST00000361866 LY6G6DO95868 133 aa9.79□□□□□ -0.84
COL6A1-201ENST00000361866 C1orf195Q5TG92 126 aa9.79□□□□□ -0.84
COL6A1-201ENST00000361866 ASH1LQ9NR48 2969 aaKnown RBP9.79□□□□□ -0.84
COL6A1-201ENST00000361866 LYRM9A8MSI8 78 aa9.78□□□□□ -0.84
COL6A1-201ENST00000361866 KLK9Q2XQG4 91 aa9.78□□□□□ -0.84
COL6A1-201ENST00000361866 IGLV5-45A0A087WSX0 123 aa9.77□□□□□ -0.84
COL6A1-201ENST00000361866 GCN1Q92616 2671 aaKnown RBP9.77□□□□□ -0.84
COL6A1-201ENST00000361866 NBEAL2Q6ZNJ1 2754 aa9.77□□□□□ -0.84
COL6A1-201ENST00000361866 DMXL1Q9Y485 3027 aa9.77□□□□□ -0.85
COL6A1-201ENST00000361866 SMR3AQ99954 134 aa9.77□□□□□ -0.85
COL6A1-201ENST00000361866 C4orf26Q17RF5 130 aa9.77□□□□□ -0.85
COL6A1-201ENST00000361866 KIR2DL5BQ8NHK3 375 aa9.77□□□□□ -0.85
COL6A1-201ENST00000361866 SMCR5Q8TEV8 140 aa9.77□□□□□ -0.85
COL6A1-201ENST00000361866 TRBV10-3A0A0K0K1G6 114 aa9.76□□□□□ -0.85
COL6A1-201ENST00000361866 ITPR1Q14643 2758 aa9.76□□□□□ -0.85
COL6A1-201ENST00000361866 MGAM2Q2M2H8 2515 aa9.76□□□□□ -0.85
COL6A1-201ENST00000361866 IGLV1-51P01701 117 aa9.75□□□□□ -0.85
COL6A1-201ENST00000361866 SMIM26A0A096LP01 95 aa9.74□□□□□ -0.85
COL6A1-201ENST00000361866 ZNF73O43830 326 aaPredicted RBP9.74□□□□□ -0.85
COL6A1-201ENST00000361866 HELZ2Q9BYK8 2649 aaKnown RBP9.74□□□□□ -0.85
COL6A1-201ENST00000361866 PRR4Q16378 134 aa9.74□□□□□ -0.85
COL6A1-201ENST00000361866 IGKV2-24A0A0C4DH68 120 aa9.74□□□□□ -0.85
COL6A1-201ENST00000361866 SPTSSBQ8NFR3 76 aa9.74□□□□□ -0.85
COL6A1-201ENST00000361866 A0A096LNI7 61 aa9.73□□□□□ -0.85
COL6A1-201ENST00000361866 Q8N3U1 123 aa9.72□□□□□ -0.85
COL6A1-201ENST00000361866 FLNCQ14315 2725 aa9.71□□□□□ -0.85
COL6A1-201ENST00000361866 ZFHX4Q86UP3 3567 aa9.71□□□□□ -0.85
COL6A1-201ENST00000361866 CELA1Q9UNI1 258 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms