RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 PIEZO2Q9H5I5 2752 aa7.81□□□□□ -1.16
CLIP1-203ENST00000361654 IGLV4-60A0A075B6I1 120 aa7.81□□□□□ -1.16
CLIP1-203ENST00000361654 C9orf116Q5BN46 136 aaPredicted RBP7.81□□□□□ -1.16
CLIP1-203ENST00000361654 A0A1W2PPR1 153 aa7.81□□□□□ -1.16
CLIP1-203ENST00000361654 LINC01561Q8N1V8 128 aa7.81□□□□□ -1.16
CLIP1-203ENST00000361654 ATG2AQ2TAZ0 1938 aa7.8□□□□□ -1.16
CLIP1-203ENST00000361654 SMIM1B2RUZ4 78 aa7.8□□□□□ -1.16
CLIP1-203ENST00000361654 BEAN1Q3B7T3 259 aa7.8□□□□□ -1.16
CLIP1-203ENST00000361654 PCDH15Q96QU1 1955 aa7.8□□□□□ -1.16
CLIP1-203ENST00000361654 EDN2P20800 178 aa7.8□□□□□ -1.16
CLIP1-203ENST00000361654 IMUPQ9GZP8 106 aa7.8□□□□□ -1.16
CLIP1-203ENST00000361654 FAM30AQ9NZY2 134 aa7.8□□□□□ -1.16
CLIP1-203ENST00000361654 EML5Q05BV3 1969 aa7.8□□□□□ -1.16
CLIP1-203ENST00000361654 ABCA12Q86UK0 2595 aa7.79□□□□□ -1.16
CLIP1-203ENST00000361654 CCDC179H3BU77 68 aa7.79□□□□□ -1.16
CLIP1-203ENST00000361654 J3QL48 77 aa7.79□□□□□ -1.16
CLIP1-203ENST00000361654 PRR4Q16378 134 aa7.79□□□□□ -1.16
CLIP1-203ENST00000361654 WWC2-AS2Q96NR7 200 aa7.79□□□□□ -1.16
CLIP1-203ENST00000361654 Q8N814 137 aa7.78□□□□□ -1.16
CLIP1-203ENST00000361654 TRBV7-6A0A0J9YX20 115 aa7.78□□□□□ -1.16
CLIP1-203ENST00000361654 IGIPA6NJ69 53 aa7.78□□□□□ -1.16
CLIP1-203ENST00000361654 LINC00208Q96KT6 92 aa7.78□□□□□ -1.16
CLIP1-203ENST00000361654 MRPS12O15235 138 aaKnown RBP7.78□□□□□ -1.16
CLIP1-203ENST00000361654 GOLGB1Q14789 3259 aaKnown RBP7.78□□□□□ -1.16
CLIP1-203ENST00000361654 PLXNB1O43157 2135 aa7.77□□□□□ -1.16
CLIP1-203ENST00000361654 C16orf90A8MZG2 172 aa7.77□□□□□ -1.17
CLIP1-203ENST00000361654 RETNLBQ9BQ08 111 aa7.77□□□□□ -1.17
CLIP1-203ENST00000361654 A0A087WSZ3 146 aa7.77□□□□□ -1.17
CLIP1-203ENST00000361654 SNURFQ9Y675 71 aa7.76□□□□□ -1.17
CLIP1-203ENST00000361654 TLN1Q9Y490 2541 aaKnown RBP7.75□□□□□ -1.17
CLIP1-203ENST00000361654 PLA2G1BP04054 148 aaKnown RBP7.75□□□□□ -1.17
CLIP1-203ENST00000361654 LINC01547P58512 204 aaPredicted RBP7.75□□□□□ -1.17
CLIP1-203ENST00000361654 CELA1Q9UNI1 258 aa7.75□□□□□ -1.17
CLIP1-203ENST00000361654 SPINK1P00995 79 aa7.75□□□□□ -1.17
CLIP1-203ENST00000361654 LINC00694P0DN24 101 aa7.74□□□□□ -1.17
CLIP1-203ENST00000361654 Q6ZRU5 148 aa7.74□□□□□ -1.17
CLIP1-203ENST00000361654 EP400Q96L91 3159 aa7.74□□□□□ -1.17
CLIP1-203ENST00000361654 C10orf142B7Z368 130 aa7.74□□□□□ -1.17
CLIP1-203ENST00000361654 KRTAP24-1Q3LI83 254 aa7.74□□□□□ -1.17
CLIP1-203ENST00000361654 A0A0U1RQV1 116 aa7.74□□□□□ -1.17
CLIP1-203ENST00000361654 SMCR5Q8TEV8 140 aa7.74□□□□□ -1.17
CLIP1-203ENST00000361654 GAS8-AS1O95177 125 aa7.73□□□□□ -1.17
CLIP1-203ENST00000361654 C22orf24Q9Y442 160 aa7.73□□□□□ -1.17
CLIP1-203ENST00000361654 HCFC1P51610 2035 aa7.73□□□□□ -1.17
CLIP1-203ENST00000361654 MUC22E2RYF6 1773 aaPredicted RBP7.73□□□□□ -1.17
CLIP1-203ENST00000361654 Q6Q795 121 aa7.73□□□□□ -1.17
CLIP1-203ENST00000361654 FN1P02751 2386 aaKnown RBP7.73□□□□□ -1.17
CLIP1-203ENST00000361654 PRLHP81277 87 aa7.73□□□□□ -1.17
CLIP1-203ENST00000361654 SPACA4Q8TDM5 124 aa7.72□□□□□ -1.17
CLIP1-203ENST00000361654 CEP192Q8TEP8 1941 aa7.72□□□□□ -1.17
CLIP1-203ENST00000361654 H3BNG1 76 aa7.72□□□□□ -1.17
CLIP1-203ENST00000361654 CRYGAP11844 174 aa7.72□□□□□ -1.17
CLIP1-203ENST00000361654 hDV103S1A0JD37 113 aa7.71□□□□□ -1.17
CLIP1-203ENST00000361654 CPAMD8Q8IZJ3 1885 aa7.71□□□□□ -1.18
CLIP1-203ENST00000361654 AMELXQ99217 191 aa7.71□□□□□ -1.18
CLIP1-203ENST00000361654 KIF25-AS1Q9Y6Z4 181 aa7.71□□□□□ -1.18
CLIP1-203ENST00000361654 PRR3P79522 188 aaKnown RBP7.7□□□□□ -1.18
CLIP1-203ENST00000361654 A0A096LNJ9 63 aa7.7□□□□□ -1.18
CLIP1-203ENST00000361654 Q6ZRP5 223 aa7.7□□□□□ -1.18
CLIP1-203ENST00000361654 LINC00575Q6W349 94 aa7.7□□□□□ -1.18
CLIP1-203ENST00000361654 TRAV7A0A075B6U4 112 aa7.69□□□□□ -1.18
CLIP1-203ENST00000361654 NBDYA0A0U1RRE5 68 aa7.69□□□□□ -1.18
CLIP1-203ENST00000361654 TLN2Q9Y4G6 2542 aa7.69□□□□□ -1.18
CLIP1-203ENST00000361654 SBSPONQ8IVN8 264 aa7.69□□□□□ -1.18
CLIP1-203ENST00000361654 PCOTHQ58A44 107 aa7.68□□□□□ -1.18
CLIP1-203ENST00000361654 ARHGAP32A7KAX9 2087 aa7.68□□□□□ -1.18
CLIP1-203ENST00000361654 IGKV2D-30A0A075B6S6 120 aa7.68□□□□□ -1.18
CLIP1-203ENST00000361654 IGKV2-30P06310 120 aa7.68□□□□□ -1.18
CLIP1-203ENST00000361654 HCG22E2RYF7 251 aa7.68□□□□□ -1.18
CLIP1-203ENST00000361654 RTL8CO15255 209 aa7.68□□□□□ -1.18
CLIP1-203ENST00000361654 TANC2Q9HCD6 1990 aa7.68□□□□□ -1.18
CLIP1-203ENST00000361654 H0Y9P7 68 aa7.68□□□□□ -1.18
CLIP1-203ENST00000361654 USP9XQ93008 2570 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-203ENST00000361654 COX7CP15954 63 aa7.67□□□□□ -1.18
CLIP1-203ENST00000361654 COX8CQ7Z4L0 72 aa7.67□□□□□ -1.18
CLIP1-203ENST00000361654 TYMSOSQ8TAI1 123 aa7.67□□□□□ -1.18
CLIP1-203ENST00000361654 COL5A1P20908 1838 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-203ENST00000361654 CDIP1Q9H305 208 aa7.66□□□□□ -1.18
CLIP1-203ENST00000361654 LINC00315P59091 139 aa7.66□□□□□ -1.18
CLIP1-203ENST00000361654 Q6ZSN1 163 aa7.66□□□□□ -1.18
CLIP1-203ENST00000361654 MOBPQ13875 183 aa7.65□□□□□ -1.18
CLIP1-203ENST00000361654 ADAMTS20P59510 1910 aa7.65□□□□□ -1.18
CLIP1-203ENST00000361654 MUC4Q99102 2169 aa7.65□□□□□ -1.19
CLIP1-203ENST00000361654 A0A087WYN8 130 aa7.65□□□□□ -1.19
CLIP1-203ENST00000361654 FASNP49327 2511 aaKnown RBP7.63□□□□□ -1.19
CLIP1-203ENST00000361654 TRBV7-7A0A0K0K1E9 115 aa7.63□□□□□ -1.19
CLIP1-203ENST00000361654 EXPH5Q8NEV8 1989 aa7.63□□□□□ -1.19
CLIP1-203ENST00000361654 DEFB116Q30KQ4 102 aa7.63□□□□□ -1.19
CLIP1-203ENST00000361654 C7orf65Q6ZTY9 151 aa7.62□□□□□ -1.19
CLIP1-203ENST00000361654 LINC00167Q96N53 147 aa7.62□□□□□ -1.19
CLIP1-203ENST00000361654 F8P00451 2351 aa7.62□□□□□ -1.19
CLIP1-203ENST00000361654 Q8N3U1 123 aa7.62□□□□□ -1.19
CLIP1-203ENST00000361654 SMIM26A0A096LP01 95 aa7.62□□□□□ -1.19
CLIP1-203ENST00000361654 ATP11AUNQ6ZP68 121 aa7.62□□□□□ -1.19
CLIP1-203ENST00000361654 Q8NBF4 154 aa7.61□□□□□ -1.19
CLIP1-203ENST00000361654 TP53AIP1Q9HCN2 124 aa7.61□□□□□ -1.19
CLIP1-203ENST00000361654 COX6B2Q6YFQ2 88 aa7.61□□□□□ -1.19
CLIP1-203ENST00000361654 LRP4O75096 1905 aa7.61□□□□□ -1.19
CLIP1-203ENST00000361654 RAI1Q7Z5J4 1906 aaPredicted RBP7.61□□□□□ -1.19
CLIP1-203ENST00000361654 C11orf72Q8NBR9 251 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms