RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 CRYGAP11844 174 aa5.52□□□□□ -1.53
CCL28-201ENST00000361115 C19orf54Q5BKX5 351 aa5.52□□□□□ -1.53
CCL28-201ENST00000361115 VWFP04275 2813 aa5.52□□□□□ -1.53
CCL28-201ENST00000361115 IGHV3-16A0A0C4DH30 117 aa5.52□□□□□ -1.53
CCL28-201ENST00000361115 LINC01561Q8N1V8 128 aa5.52□□□□□ -1.53
CCL28-201ENST00000361115 RYR2Q92736 4967 aa5.52□□□□□ -1.53
CCL28-201ENST00000361115 ATP5G1P05496 136 aa5.51□□□□□ -1.53
CCL28-201ENST00000361115 HIST1H4AP62805 103 aaKnown RBP5.51□□□□□ -1.53
CCL28-201ENST00000361115 C11orf45Q8TAV5 145 aa5.51□□□□□ -1.53
CCL28-201ENST00000361115 DSCR8Q96T75 97 aa5.51□□□□□ -1.53
CCL28-201ENST00000361115 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
CCL28-201ENST00000361115 COX7A2LO14548 114 aa5.51□□□□□ -1.53
CCL28-201ENST00000361115 BAALC-AS2P0C853 105 aa5.51□□□□□ -1.53
CCL28-201ENST00000361115 CXCL5P42830 114 aa5.51□□□□□ -1.53
CCL28-201ENST00000361115 TRAV12-2A0A075B6T6 113 aa5.5□□□□□ -1.53
CCL28-201ENST00000361115 BRK1Q8WUW1 75 aa5.5□□□□□ -1.53
CCL28-201ENST00000361115 LINC00476Q8WZB0 136 aa5.5□□□□□ -1.53
CCL28-201ENST00000361115 USMG5Q96IX5 58 aa5.5□□□□□ -1.53
CCL28-201ENST00000361115 FAM218AQ96MZ4 157 aa5.5□□□□□ -1.53
CCL28-201ENST00000361115 TRAV13-1A0A0B4J241 112 aa5.5□□□□□ -1.53
CCL28-201ENST00000361115 TRACP01848 142 aa5.5□□□□□ -1.53
CCL28-201ENST00000361115 NDUFC2O95298 119 aa5.5□□□□□ -1.53
CCL28-201ENST00000361115 Q9UF83 564 aa5.5□□□□□ -1.53
CCL28-201ENST00000361115 IGHV3-73A0A0B4J1V6 119 aa5.49□□□□□ -1.53
CCL28-201ENST00000361115 IGKV3-20P01619 116 aa5.49□□□□□ -1.53
CCL28-201ENST00000361115 IGHV3-11P01762 117 aa5.49□□□□□ -1.53
CCL28-201ENST00000361115 TMEM258P61165 79 aa5.49□□□□□ -1.53
CCL28-201ENST00000361115 SOSTDC1Q6X4U4 206 aa5.49□□□□□ -1.53
CCL28-201ENST00000361115 LINC00308Q8TCZ7 52 aa5.49□□□□□ -1.53
CCL28-201ENST00000361115 ZNF625Q96I27 306 aaPredicted RBP5.49□□□□□ -1.53
CCL28-201ENST00000361115 DNAH7Q8WXX0 4024 aa5.49□□□□□ -1.53
CCL28-201ENST00000361115 ATOX1O00244 68 aa5.48□□□□□ -1.53
CCL28-201ENST00000361115 NDUFA4O00483 81 aa5.48□□□□□ -1.53
CCL28-201ENST00000361115 TIMM17BO60830 172 aa5.48□□□□□ -1.53
CCL28-201ENST00000361115 SERTAD4-AS1Q5TG53 156 aa5.48□□□□□ -1.53
CCL28-201ENST00000361115 RHPN1-AS1Q9BWJ2 59 aa5.48□□□□□ -1.53
CCL28-201ENST00000361115 CDKN2A-AS1Q9UH64 79 aa5.48□□□□□ -1.53
CCL28-201ENST00000361115 Q9HAA7 133 aa5.48□□□□□ -1.53
CCL28-201ENST00000361115 IGKV3D-7A0A0C4DH55 119 aa5.48□□□□□ -1.53
CCL28-201ENST00000361115 C9orf129Q5T035 196 aaKnown RBP5.48□□□□□ -1.53
CCL28-201ENST00000361115 UPK3BQ9BT76 320 aa5.48□□□□□ -1.53
CCL28-201ENST00000361115 RYR3Q15413 4870 aa5.47□□□□□ -1.53
CCL28-201ENST00000361115 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.47□□□□□ -1.53
CCL28-201ENST00000361115 A0A087WVE0 104 aa5.47□□□□□ -1.53
CCL28-201ENST00000361115 IGKV2-29A2NJV5 120 aaPredicted RBP5.47□□□□□ -1.53
CCL28-201ENST00000361115 NDUFA1O15239 70 aa5.47□□□□□ -1.53
CCL28-201ENST00000361115 FAM223BA6NKX1 122 aa5.47□□□□□ -1.53
CCL28-201ENST00000361115 IGHV4-30-4P0DP06 118 aa5.47□□□□□ -1.53
CCL28-201ENST00000361115 RPL18AQ02543 176 aaKnown RBP5.47□□□□□ -1.53
CCL28-201ENST00000361115 FAM223AQ8IWN6 122 aa5.47□□□□□ -1.53
CCL28-201ENST00000361115 DNAH6Q9C0G6 4158 aa5.46□□□□□ -1.53
CCL28-201ENST00000361115 MRPL55Q7Z7F7 128 aaKnown RBP5.46□□□□□ -1.53
CCL28-201ENST00000361115 CHCHD7Q9BUK0 85 aa5.46□□□□□ -1.53
CCL28-201ENST00000361115 Q9H8V8 135 aa5.46□□□□□ -1.53
CCL28-201ENST00000361115 UBE2D4Q9Y2X8 147 aa5.46□□□□□ -1.53
CCL28-201ENST00000361115 COX6A2Q02221 97 aa5.46□□□□□ -1.54
CCL28-201ENST00000361115 IGHV1OR15-1A0A075B7D0 117 aa5.45□□□□□ -1.54
CCL28-201ENST00000361115 KNCNA6PVL3 124 aa5.45□□□□□ -1.54
CCL28-201ENST00000361115 SPINK13Q1W4C9 94 aa5.45□□□□□ -1.54
CCL28-201ENST00000361115 FAM222AQ5U5X8 452 aa5.45□□□□□ -1.54
CCL28-201ENST00000361115 LINC00467Q9BRT7 94 aa5.45□□□□□ -1.54
CCL28-201ENST00000361115 C11orf68Q9H3H3 251 aaKnown RBP5.45□□□□□ -1.54
CCL28-201ENST00000361115 INAFM2P0DMQ5 153 aa5.45□□□□□ -1.54
CCL28-201ENST00000361115 APOC4P55056 127 aa5.45□□□□□ -1.54
CCL28-201ENST00000361115 CIRBPQ14011 172 aaKnown RBP5.45□□□□□ -1.54
CCL28-201ENST00000361115 Q6ZSN1 163 aa5.45□□□□□ -1.54
CCL28-201ENST00000361115 SERP2Q8N6R1 65 aa5.45□□□□□ -1.54
CCL28-201ENST00000361115 IGHV3-38A0A0C4DH36 116 aa5.44□□□□□ -1.54
CCL28-201ENST00000361115 C14orf132Q9NPU4 83 aa5.44□□□□□ -1.54
CCL28-201ENST00000361115 PRM2P04554 102 aa5.44□□□□□ -1.54
CCL28-201ENST00000361115 LINC00846Q9NV44 126 aa5.44□□□□□ -1.54
CCL28-201ENST00000361115 KMT2CQ8NEZ4 4911 aaKnown RBP5.44□□□□□ -1.54
CCL28-201ENST00000361115 VPREB1P12018 145 aa5.43□□□□□ -1.54
CCL28-201ENST00000361115 GYPEP15421 78 aa5.43□□□□□ -1.54
CCL28-201ENST00000361115 HTN1P15515 57 aa5.43□□□□□ -1.54
CCL28-201ENST00000361115 PIK3CD-AS1Q5SR53 167 aa5.43□□□□□ -1.54
CCL28-201ENST00000361115 IGLV5-45A0A087WSX0 123 aa5.43□□□□□ -1.54
CCL28-201ENST00000361115 IGLV5-39A0A0G2JS06 123 aa5.43□□□□□ -1.54
CCL28-201ENST00000361115 USP17L23D6RBM5 183 aa5.43□□□□□ -1.54
CCL28-201ENST00000361115 Q6JHZ5 121 aa5.43□□□□□ -1.54
CCL28-201ENST00000361115 DNAL4O96015 105 aa5.42□□□□□ -1.54
CCL28-201ENST00000361115 RBMY1A1P0DJD3 496 aaKnown RBP5.42□□□□□ -1.54
CCL28-201ENST00000361115 RBMY1CP0DJD4 496 aa5.42□□□□□ -1.54
CCL28-201ENST00000361115 RBMY1FQ15415 496 aaKnown RBP5.42□□□□□ -1.54
CCL28-201ENST00000361115 A0A087WYN8 130 aa5.42□□□□□ -1.54
CCL28-201ENST00000361115 RBMY1BA6NDE4 496 aaKnown RBP5.42□□□□□ -1.54
CCL28-201ENST00000361115 RBMY1EA6NEQ0 496 aaKnown RBP5.42□□□□□ -1.54
CCL28-201ENST00000361115 RBMY1DP0C7P1 496 aaKnown RBP5.42□□□□□ -1.54
CCL28-201ENST00000361115 IGHV3OR16-12A0A075B7B8 117 aa5.41□□□□□ -1.54
CCL28-201ENST00000361115 SYNJ2BPP57105 145 aa5.41□□□□□ -1.54
CCL28-201ENST00000361115 FHL2Q14192 279 aa5.41□□□□□ -1.54
CCL28-201ENST00000361115 LINC00242Q5T6M2 205 aa5.41□□□□□ -1.54
CCL28-201ENST00000361115 SACSQ9NZJ4 4579 aa5.41□□□□□ -1.54
CCL28-201ENST00000361115 SMIM1B2RUZ4 78 aa5.41□□□□□ -1.54
CCL28-201ENST00000361115 TGP01266 2768 aa5.4□□□□□ -1.54
CCL28-201ENST00000361115 LINC00337Q8N6G1 96 aa5.4□□□□□ -1.54
CCL28-201ENST00000361115 RPL28P46779 137 aaKnown RBP5.4□□□□□ -1.55
CCL28-201ENST00000361115 NCR3O14931 201 aa5.39□□□□□ -1.55
CCL28-201ENST00000361115 C10orf99Q6UWK7 81 aa5.39□□□□□ -1.55
CCL28-201ENST00000361115 C1orf158Q8N1D5 194 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms