RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 CHAC1Q9BUX1 264 aa4.32□□□□□ -1.72
CCDC196-201ENST00000359454 RPP21Q9H633 154 aaKnown RBP4.32□□□□□ -1.72
CCDC196-201ENST00000359454 LENEPQ9Y5L5 61 aa4.32□□□□□ -1.72
CCDC196-201ENST00000359454 SERP1Q9Y6X1 66 aa4.32□□□□□ -1.72
CCDC196-201ENST00000359454 DNAH5Q8TE73 4624 aa4.32□□□□□ -1.72
CCDC196-201ENST00000359454 HERC1Q15751 4861 aa4.32□□□□□ -1.72
CCDC196-201ENST00000359454 A0A087WTM6 91 aa4.31□□□□□ -1.72
CCDC196-201ENST00000359454 A0A096LPF7 62 aa4.31□□□□□ -1.72
CCDC196-201ENST00000359454 TRAV8-1A0A0A6YYK1 113 aa4.31□□□□□ -1.72
CCDC196-201ENST00000359454 C19orf71A6NCJ1 209 aa4.31□□□□□ -1.72
CCDC196-201ENST00000359454 ATOX1O00244 68 aa4.31□□□□□ -1.72
CCDC196-201ENST00000359454 SMR3BP02814 79 aaPredicted RBP4.31□□□□□ -1.72
CCDC196-201ENST00000359454 CXCL5P42830 114 aa4.31□□□□□ -1.72
CCDC196-201ENST00000359454 UBE2D3P61077 147 aa4.31□□□□□ -1.72
CCDC196-201ENST00000359454 UBE2D2P62837 147 aa4.31□□□□□ -1.72
CCDC196-201ENST00000359454 HBBP68871 147 aa4.31□□□□□ -1.72
CCDC196-201ENST00000359454 RIGQ13278 110 aa4.31□□□□□ -1.72
CCDC196-201ENST00000359454 Q6ZRU5 148 aa4.31□□□□□ -1.72
CCDC196-201ENST00000359454 Q9UF83 564 aa4.31□□□□□ -1.72
CCDC196-201ENST00000359454 NXPH4O95158 308 aa4.3□□□□□ -1.72
CCDC196-201ENST00000359454 TCL1BO95988 128 aa4.3□□□□□ -1.72
CCDC196-201ENST00000359454 DAZ2Q13117 558 aaKnown RBP4.3□□□□□ -1.72
CCDC196-201ENST00000359454 LINC00173Q6ZV60 143 aa4.3□□□□□ -1.72
CCDC196-201ENST00000359454 MRPL55Q7Z7F7 128 aaKnown RBP4.3□□□□□ -1.72
CCDC196-201ENST00000359454 PRNTQ86SH4 94 aa4.3□□□□□ -1.72
CCDC196-201ENST00000359454 Q86TA4 180 aa4.3□□□□□ -1.72
CCDC196-201ENST00000359454 NEXN-AS1Q8NBZ9 246 aa4.3□□□□□ -1.72
CCDC196-201ENST00000359454 VSIG2Q96IQ7 327 aa4.3□□□□□ -1.72
CCDC196-201ENST00000359454 DSCR8Q96T75 97 aa4.3□□□□□ -1.72
CCDC196-201ENST00000359454 HHLA3Q9XRX5 114 aa4.3□□□□□ -1.72
CCDC196-201ENST00000359454 VPS13BQ7Z7G8 4022 aa4.3□□□□□ -1.72
CCDC196-201ENST00000359454 TRGV2A0A075B6R0 118 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 A0A0U1RQV1 116 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 MYMXA0A1B0GTQ4 84 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 A0A1B0GUT8 65 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 hADV29S1A0JD25 119 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 HIGD1CA8MV81 97 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 USP17L23D6RBM5 183 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 NPYP01303 97 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 IGLV2-11P01706 119 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 ACYP1P07311 99 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 DNAH10OSP0CZ25 163 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 NPC2P61916 151 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 HIST1H4AP62805 103 aaKnown RBP4.29□□□□□ -1.72
CCDC196-201ENST00000359454 TMEM170BQ5T4T1 132 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 Q6ZTI0 123 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 PRR15Q8IV56 129 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 PCP2Q8IVA1 136 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 COPS9Q8WXC6 57 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 DPH3P1Q9H4G8 78 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 ICOSQ9Y6W8 199 aa4.29□□□□□ -1.72
CCDC196-201ENST00000359454 H3BT86 120 aa4.28□□□□□ -1.72
CCDC196-201ENST00000359454 H3BTX0 84 aa4.28□□□□□ -1.72
CCDC196-201ENST00000359454 PRB4P10163 310 aaPredicted RBP4.28□□□□□ -1.72
CCDC196-201ENST00000359454 PSMB2P49721 201 aa4.28□□□□□ -1.72
CCDC196-201ENST00000359454 C9orf47Q6ZRZ4 202 aa4.28□□□□□ -1.72
CCDC196-201ENST00000359454 LINC00467Q9BRT7 94 aa4.28□□□□□ -1.72
CCDC196-201ENST00000359454 MSRB1Q9NZV6 116 aa4.28□□□□□ -1.72
CCDC196-201ENST00000359454 TRGV1A0A0A0MS02 117 aa4.27□□□□□ -1.73
CCDC196-201ENST00000359454 TRAV12-3A0A0B4J271 114 aa4.27□□□□□ -1.73
CCDC196-201ENST00000359454 A0A1B0GXF2 115 aa4.27□□□□□ -1.73
CCDC196-201ENST00000359454 KRTAP29-1A8MX34 341 aaPredicted RBP4.27□□□□□ -1.73
CCDC196-201ENST00000359454 PRAC2D3DTV9 90 aa4.27□□□□□ -1.73
CCDC196-201ENST00000359454 ZNF138P52744 262 aa4.27□□□□□ -1.73
CCDC196-201ENST00000359454 MRPS36P82909 103 aaKnown RBP4.27□□□□□ -1.73
CCDC196-201ENST00000359454 LYPD5Q6UWN5 251 aa4.27□□□□□ -1.73
CCDC196-201ENST00000359454 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
CCDC196-201ENST00000359454 RPL36ALQ969Q0 106 aaKnown RBP4.27□□□□□ -1.73
CCDC196-201ENST00000359454 FLG2Q5D862 2391 aaPredicted RBP4.27□□□□□ -1.73
CCDC196-201ENST00000359454 TRBV7-3A0A075B6L6 115 aa4.26□□□□□ -1.73
CCDC196-201ENST00000359454 TRBV25-1A0A075B6N4 114 aa4.26□□□□□ -1.73
CCDC196-201ENST00000359454 IGLV5-52A0A0A0MRZ9 124 aa4.26□□□□□ -1.73
CCDC196-201ENST00000359454 SLC25A20O43772 301 aa4.26□□□□□ -1.73
CCDC196-201ENST00000359454 SPINK4O60575 86 aa4.26□□□□□ -1.73
CCDC196-201ENST00000359454 CACNG7P62955 275 aa4.26□□□□□ -1.73
CCDC196-201ENST00000359454 HAMPP81172 84 aa4.26□□□□□ -1.73
CCDC196-201ENST00000359454 ZNF56Q15929 161 aa4.26□□□□□ -1.73
CCDC196-201ENST00000359454 C10orf25Q5T742 122 aa4.26□□□□□ -1.73
CCDC196-201ENST00000359454 SERTAD4-AS1Q5TG53 156 aa4.26□□□□□ -1.73
CCDC196-201ENST00000359454 C5orf38Q86SI9 138 aa4.26□□□□□ -1.73
CCDC196-201ENST00000359454 LINC00643Q86TS7 51 aa4.26□□□□□ -1.73
CCDC196-201ENST00000359454 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
CCDC196-201ENST00000359454 C11orf72Q8NBR9 251 aa4.26□□□□□ -1.73
CCDC196-201ENST00000359454 NXT2Q9NPJ8 142 aaKnown RBP4.26□□□□□ -1.73
CCDC196-201ENST00000359454 PRO0255Q9UI72 69 aa4.26□□□□□ -1.73
CCDC196-201ENST00000359454 TRBV7-6A0A0J9YX20 115 aa4.25□□□□□ -1.73
CCDC196-201ENST00000359454 M0R3E3 92 aa4.25□□□□□ -1.73
CCDC196-201ENST00000359454 DAZ4Q86SG3 579 aaKnown RBP4.25□□□□□ -1.73
CCDC196-201ENST00000359454 PGLYRP4Q96LB8 373 aa4.25□□□□□ -1.73
CCDC196-201ENST00000359454 CNFNQ9BYD5 112 aa4.25□□□□□ -1.73
CCDC196-201ENST00000359454 DAZ3Q9NR90 486 aaKnown RBP4.25□□□□□ -1.73
CCDC196-201ENST00000359454 TRAV21A0A0B4J279 112 aa4.24□□□□□ -1.73
CCDC196-201ENST00000359454 LRCOL1A6NCL2 159 aa4.24□□□□□ -1.73
CCDC196-201ENST00000359454 PSCAO43653 123 aa4.24□□□□□ -1.73
CCDC196-201ENST00000359454 SH2D1AO60880 128 aa4.24□□□□□ -1.73
CCDC196-201ENST00000359454 PPP1R17O96001 155 aa4.24□□□□□ -1.73
CCDC196-201ENST00000359454 IGHV3-53P01767 116 aa4.24□□□□□ -1.73
CCDC196-201ENST00000359454 HERVK_113P61574 105 aa4.24□□□□□ -1.73
CCDC196-201ENST00000359454 SRSF9Q13242 221 aaKnown RBP eCLIP4.24□□□□□ -1.73
CCDC196-201ENST00000359454 WFDC10BQ8IUB3 73 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms