RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 INAFM2P0DMQ5 153 aa7.87□□□□□ -1.15
SSU72-202ENST00000359060 IBA57-AS1B1ANH7 110 aa7.87□□□□□ -1.15
SSU72-202ENST00000359060 SPAG11BQ08648 103 aa7.87□□□□□ -1.15
SSU72-202ENST00000359060 IGLV5-45A0A087WSX0 123 aa7.86□□□□□ -1.15
SSU72-202ENST00000359060 CCL18P55774 89 aa7.86□□□□□ -1.15
SSU72-202ENST00000359060 OXLD1Q5BKU9 147 aa7.86□□□□□ -1.15
SSU72-202ENST00000359060 C19orf73Q9NVV2 129 aa7.85□□□□□ -1.15
SSU72-202ENST00000359060 NCR3O14931 201 aa7.85□□□□□ -1.15
SSU72-202ENST00000359060 SOSTDC1Q6X4U4 206 aa7.85□□□□□ -1.15
SSU72-202ENST00000359060 SS18L2Q9UHA2 77 aa7.85□□□□□ -1.15
SSU72-202ENST00000359060 A0A087WZ39 114 aa7.85□□□□□ -1.15
SSU72-202ENST00000359060 H0YGX0 51 aa7.85□□□□□ -1.15
SSU72-202ENST00000359060 IGHV4-30-4P0DP06 118 aa7.85□□□□□ -1.15
SSU72-202ENST00000359060 LAMTOR3Q9UHA4 124 aa7.85□□□□□ -1.15
SSU72-202ENST00000359060 FAM104AQ969W3 186 aa7.84□□□□□ -1.15
SSU72-202ENST00000359060 B5MCH6 92 aa7.84□□□□□ -1.15
SSU72-202ENST00000359060 SLPIP03973 132 aa7.84□□□□□ -1.15
SSU72-202ENST00000359060 MIFP14174 115 aa7.84□□□□□ -1.15
SSU72-202ENST00000359060 PLAC8L1A1L4L8 177 aa7.84□□□□□ -1.15
SSU72-202ENST00000359060 CSNK1G2-AS1Q8NCQ2 148 aa7.84□□□□□ -1.15
SSU72-202ENST00000359060 IGHV3OR16-9A0A0B4J2B5 98 aa7.83□□□□□ -1.16
SSU72-202ENST00000359060 MRAPQ8TCY5 172 aa7.83□□□□□ -1.16
SSU72-202ENST00000359060 SMIM11BQ8TCY0 68 aa7.83□□□□□ -1.16
SSU72-202ENST00000359060 SBSPONQ8IVN8 264 aa7.83□□□□□ -1.16
SSU72-202ENST00000359060 IL17DQ8TAD2 202 aa7.83□□□□□ -1.16
SSU72-202ENST00000359060 KRTAP10-3P60369 221 aa7.82□□□□□ -1.16
SSU72-202ENST00000359060 X6R8D5 127 aa7.82□□□□□ -1.16
SSU72-202ENST00000359060 IGKV2D-24A0A075B6R9 120 aa7.82□□□□□ -1.16
SSU72-202ENST00000359060 C9orf116Q5BN46 136 aaPredicted RBP7.82□□□□□ -1.16
SSU72-202ENST00000359060 CDIP1Q9H305 208 aa7.82□□□□□ -1.16
SSU72-202ENST00000359060 CD164L2Q6UWJ8 174 aa7.82□□□□□ -1.16
SSU72-202ENST00000359060 PRR3P79522 188 aaKnown RBP7.81□□□□□ -1.16
SSU72-202ENST00000359060 HIGD2BQ4VC39 106 aa7.81□□□□□ -1.16
SSU72-202ENST00000359060 ORMDL1Q9P0S3 153 aa7.81□□□□□ -1.16
SSU72-202ENST00000359060 RETNQ9HD89 108 aa7.81□□□□□ -1.16
SSU72-202ENST00000359060 TRACP01848 142 aa7.81□□□□□ -1.16
SSU72-202ENST00000359060 SMIM20Q8N5G0 67 aa7.81□□□□□ -1.16
SSU72-202ENST00000359060 CAMK2N2Q96S95 79 aa7.81□□□□□ -1.16
SSU72-202ENST00000359060 C14orf132Q9NPU4 83 aa7.81□□□□□ -1.16
SSU72-202ENST00000359060 CXCL5P42830 114 aa7.81□□□□□ -1.16
SSU72-202ENST00000359060 Q8N3U1 123 aa7.81□□□□□ -1.16
SSU72-202ENST00000359060 CELA1Q9UNI1 258 aa7.81□□□□□ -1.16
SSU72-202ENST00000359060 LINC00337Q8N6G1 96 aa7.8□□□□□ -1.16
SSU72-202ENST00000359060 HIST1H4AP62805 103 aaKnown RBP7.8□□□□□ -1.16
SSU72-202ENST00000359060 RPL18AQ02543 176 aaKnown RBP7.8□□□□□ -1.16
SSU72-202ENST00000359060 TMEM126AQ9H061 195 aa7.8□□□□□ -1.16
SSU72-202ENST00000359060 RNF183Q96D59 192 aa7.79□□□□□ -1.16
SSU72-202ENST00000359060 XAGE1AQ9HD64 81 aa7.79□□□□□ -1.16
SSU72-202ENST00000359060 NOTCH1P46531 2555 aa7.79□□□□□ -1.16
SSU72-202ENST00000359060 C1orf43Q9BWL3 253 aa7.79□□□□□ -1.16
SSU72-202ENST00000359060 Q8IZM0 81 aa7.79□□□□□ -1.16
SSU72-202ENST00000359060 MGAM2Q2M2H8 2515 aa7.78□□□□□ -1.16
SSU72-202ENST00000359060 SPATA3Q8NHX4 192 aa7.78□□□□□ -1.16
SSU72-202ENST00000359060 A0A1B0GUV1 79 aa7.78□□□□□ -1.16
SSU72-202ENST00000359060 ACYP1P07311 99 aa7.78□□□□□ -1.16
SSU72-202ENST00000359060 UNQ6190/PRO20217Q6UXQ8 127 aa7.78□□□□□ -1.16
SSU72-202ENST00000359060 LELP1Q5T871 98 aa7.77□□□□□ -1.17
SSU72-202ENST00000359060 KPRPQ5T749 579 aaPredicted RBP7.77□□□□□ -1.17
SSU72-202ENST00000359060 IGKV3D-7A0A0C4DH55 119 aa7.76□□□□□ -1.17
SSU72-202ENST00000359060 C6orf99Q4VX62 202 aa7.76□□□□□ -1.17
SSU72-202ENST00000359060 STAB1Q9NY15 2570 aa7.76□□□□□ -1.17
SSU72-202ENST00000359060 RPL28P46779 137 aaKnown RBP7.76□□□□□ -1.17
SSU72-202ENST00000359060 A0A087WYN8 130 aa7.76□□□□□ -1.17
SSU72-202ENST00000359060 PRB2P02812 416 aaPredicted RBP7.76□□□□□ -1.17
SSU72-202ENST00000359060 C6orf223Q8N319 242 aa7.75□□□□□ -1.17
SSU72-202ENST00000359060 NIPBLQ6KC79 2804 aaeCLIP7.75□□□□□ -1.17
SSU72-202ENST00000359060 FAM236AA0A1B0GUQ0 79 aa7.75□□□□□ -1.17
SSU72-202ENST00000359060 FAM236BA0A1B0GV22 79 aa7.75□□□□□ -1.17
SSU72-202ENST00000359060 CYSRT1A8MQ03 144 aa7.74□□□□□ -1.17
SSU72-202ENST00000359060 FAM218AQ96MZ4 157 aa7.74□□□□□ -1.17
SSU72-202ENST00000359060 DEFB131BA0A096LNP1 70 aa7.74□□□□□ -1.17
SSU72-202ENST00000359060 C11orf45Q8TAV5 145 aa7.74□□□□□ -1.17
SSU72-202ENST00000359060 NDUFV3P56181 108 aaKnown RBP7.74□□□□□ -1.17
SSU72-202ENST00000359060 SHISA2Q6UWI4 295 aa7.74□□□□□ -1.17
SSU72-202ENST00000359060 Q6ZTC4 211 aa7.73□□□□□ -1.17
SSU72-202ENST00000359060 COL6A5A8TX70 2615 aa7.73□□□□□ -1.17
SSU72-202ENST00000359060 NKAPP1Q8N9T2 125 aa7.72□□□□□ -1.17
SSU72-202ENST00000359060 SVIPQ8NHG7 77 aa7.72□□□□□ -1.17
SSU72-202ENST00000359060 M0QXV9 152 aa7.72□□□□□ -1.17
SSU72-202ENST00000359060 NANOS2P60321 138 aaKnown RBP7.72□□□□□ -1.17
SSU72-202ENST00000359060 LINC00643Q86TS7 51 aa7.72□□□□□ -1.17
SSU72-202ENST00000359060 NSD1Q96L73 2696 aaPredicted RBP7.72□□□□□ -1.17
SSU72-202ENST00000359060 HIVEP1P15822 2718 aa7.71□□□□□ -1.17
SSU72-202ENST00000359060 IGKV2-28A0A075B6P5 120 aa7.71□□□□□ -1.17
SSU72-202ENST00000359060 IGKV2D-28P01615 120 aa7.71□□□□□ -1.17
SSU72-202ENST00000359060 FAM19A3Q7Z5A8 133 aa7.71□□□□□ -1.18
SSU72-202ENST00000359060 HAMPP81172 84 aa7.7□□□□□ -1.18
SSU72-202ENST00000359060 A0A0J9YWU9 116 aa7.7□□□□□ -1.18
SSU72-202ENST00000359060 WFDC10BQ8IUB3 73 aa7.7□□□□□ -1.18
SSU72-202ENST00000359060 Q8NAQ8 132 aa7.7□□□□□ -1.18
SSU72-202ENST00000359060 UBL5Q9BZL1 73 aa7.7□□□□□ -1.18
SSU72-202ENST00000359060 GHRHP01286 108 aa7.7□□□□□ -1.18
SSU72-202ENST00000359060 TENM4Q6N022 2769 aa7.7□□□□□ -1.18
SSU72-202ENST00000359060 TMEM256-PLSCR3K7ERE1 68 aa7.69□□□□□ -1.18
SSU72-202ENST00000359060 SDIM1Q6ZPB5 146 aa7.69□□□□□ -1.18
SSU72-202ENST00000359060 DSCR8Q96T75 97 aa7.69□□□□□ -1.18
SSU72-202ENST00000359060 C9orf153Q5TBE3 101 aa7.69□□□□□ -1.18
SSU72-202ENST00000359060 LYPD5Q6UWN5 251 aa7.69□□□□□ -1.18
SSU72-202ENST00000359060 DIRC1Q969H9 104 aa7.69□□□□□ -1.18
SSU72-202ENST00000359060 COX17Q14061 63 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms