RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 C1orf64Q8NEQ6 169 aa8.02□□□□□ -1.13
COL11A1-202ENST00000358392 URB1-AS1Q96HZ7 61 aa8.02□□□□□ -1.13
COL11A1-202ENST00000358392 EGFEM1PQ0D2K5 195 aa8.01□□□□□ -1.13
COL11A1-202ENST00000358392 IGLV8-61A0A075B6I0 122 aa8.01□□□□□ -1.13
COL11A1-202ENST00000358392 SMIM29Q86T20 159 aa8.01□□□□□ -1.13
COL11A1-202ENST00000358392 LINC00846Q9NV44 126 aa8.01□□□□□ -1.13
COL11A1-202ENST00000358392 PTPRQQ9UMZ3 2332 aa8□□□□□ -1.13
COL11A1-202ENST00000358392 A0A1B0GU69 56 aa8□□□□□ -1.13
COL11A1-202ENST00000358392 Q6ZTC4 211 aa8□□□□□ -1.13
COL11A1-202ENST00000358392 Q6ZSN1 163 aa8□□□□□ -1.13
COL11A1-202ENST00000358392 C2orf48Q96LS8 159 aa8□□□□□ -1.13
COL11A1-202ENST00000358392 CSPG4Q6UVK1 2322 aa8□□□□□ -1.13
COL11A1-202ENST00000358392 IGLV1-40P01703 118 aa7.99□□□□□ -1.13
COL11A1-202ENST00000358392 LINC00310P59036 64 aa7.99□□□□□ -1.13
COL11A1-202ENST00000358392 C4orf26Q17RF5 130 aa7.99□□□□□ -1.13
COL11A1-202ENST00000358392 Q8N6K4 173 aa7.99□□□□□ -1.13
COL11A1-202ENST00000358392 SPINT4Q6UDR6 99 aa7.98□□□□□ -1.13
COL11A1-202ENST00000358392 FHL2Q14192 279 aa7.97□□□□□ -1.13
COL11A1-202ENST00000358392 COL5A1P20908 1838 aaPredicted RBP7.97□□□□□ -1.13
COL11A1-202ENST00000358392 PTPRSQ13332 1948 aa7.97□□□□□ -1.13
COL11A1-202ENST00000358392 HIVEP2P31629 2446 aa7.97□□□□□ -1.13
COL11A1-202ENST00000358392 FAM208BQ5VWN6 2430 aa7.96□□□□□ -1.14
COL11A1-202ENST00000358392 ODF3L2Q3SX64 289 aa7.95□□□□□ -1.14
COL11A1-202ENST00000358392 TECTAO75443 2155 aa7.95□□□□□ -1.14
COL11A1-202ENST00000358392 LRP4O75096 1905 aa7.95□□□□□ -1.14
COL11A1-202ENST00000358392 CPAMD8Q8IZJ3 1885 aa7.95□□□□□ -1.14
COL11A1-202ENST00000358392 MUC7Q8TAX7 377 aa7.95□□□□□ -1.14
COL11A1-202ENST00000358392 hDV103S1A0JD37 113 aa7.95□□□□□ -1.14
COL11A1-202ENST00000358392 OTOGLQ3ZCN5 2332 aa7.95□□□□□ -1.14
COL11A1-202ENST00000358392 Q6ZRU5 148 aa7.94□□□□□ -1.14
COL11A1-202ENST00000358392 CNFNQ9BYD5 112 aa7.94□□□□□ -1.14
COL11A1-202ENST00000358392 AVPP01185 164 aa7.94□□□□□ -1.14
COL11A1-202ENST00000358392 SPACA4Q8TDM5 124 aa7.93□□□□□ -1.14
COL11A1-202ENST00000358392 FSHBP01225 129 aa7.93□□□□□ -1.14
COL11A1-202ENST00000358392 KIAA0087Q14695 138 aa7.93□□□□□ -1.14
COL11A1-202ENST00000358392 CDSNQ15517 529 aa7.93□□□□□ -1.14
COL11A1-202ENST00000358392 SMCR5Q8TEV8 140 aa7.93□□□□□ -1.14
COL11A1-202ENST00000358392 ATRXP46100 2492 aa7.92□□□□□ -1.14
COL11A1-202ENST00000358392 SPG11Q96JI7 2443 aa7.92□□□□□ -1.14
COL11A1-202ENST00000358392 LIMD2Q9BT23 127 aa7.92□□□□□ -1.14
COL11A1-202ENST00000358392 AMELXQ99217 191 aa7.91□□□□□ -1.14
COL11A1-202ENST00000358392 LINC00337Q8N6G1 96 aa7.9□□□□□ -1.14
COL11A1-202ENST00000358392 C1orf134Q5TEV5 83 aa7.9□□□□□ -1.14
COL11A1-202ENST00000358392 PRO0628Q9UI54 55 aa7.9□□□□□ -1.14
COL11A1-202ENST00000358392 COL4A4P53420 1690 aaPredicted RBP7.9□□□□□ -1.14
COL11A1-202ENST00000358392 LYPD5Q6UWN5 251 aa7.9□□□□□ -1.14
COL11A1-202ENST00000358392 C22orf24Q9Y442 160 aa7.9□□□□□ -1.14
COL11A1-202ENST00000358392 MOBPQ13875 183 aa7.89□□□□□ -1.15
COL11A1-202ENST00000358392 CXCL6P80162 114 aa7.89□□□□□ -1.15
COL11A1-202ENST00000358392 CDIP1Q9H305 208 aa7.89□□□□□ -1.15
COL11A1-202ENST00000358392 C6orf48Q9UBA6 75 aa7.88□□□□□ -1.15
COL11A1-202ENST00000358392 ACYP2P14621 99 aa7.88□□□□□ -1.15
COL11A1-202ENST00000358392 ATP11AUNQ6ZP68 121 aa7.88□□□□□ -1.15
COL11A1-202ENST00000358392 SPATA3Q8NHX4 192 aa7.88□□□□□ -1.15
COL11A1-202ENST00000358392 ZFHX2Q9C0A1 2572 aaPredicted RBP7.87□□□□□ -1.15
COL11A1-202ENST00000358392 A0A096LNJ9 63 aa7.87□□□□□ -1.15
COL11A1-202ENST00000358392 PTPN13Q12923 2485 aa7.86□□□□□ -1.15
COL11A1-202ENST00000358392 KRTAP10-9P60411 292 aa7.85□□□□□ -1.15
COL11A1-202ENST00000358392 RPL37AP61513 92 aaKnown RBP7.85□□□□□ -1.15
COL11A1-202ENST00000358392 IGLV1-51P01701 117 aa7.85□□□□□ -1.15
COL11A1-202ENST00000358392 CHTF8P0CG12 524 aa7.85□□□□□ -1.15
COL11A1-202ENST00000358392 SSBP3-AS1Q7Z2R9 100 aa7.84□□□□□ -1.15
COL11A1-202ENST00000358392 LTBP2Q14767 1821 aa7.84□□□□□ -1.15
COL11A1-202ENST00000358392 ADAMTS20P59510 1910 aa7.84□□□□□ -1.15
COL11A1-202ENST00000358392 PTPRBP23467 1997 aa7.84□□□□□ -1.16
COL11A1-202ENST00000358392 C8orf87E5RJ46 101 aa7.82□□□□□ -1.16
COL11A1-202ENST00000358392 A0A1B0GUV1 79 aa7.81□□□□□ -1.16
COL11A1-202ENST00000358392 VPREB1P12018 145 aa7.81□□□□□ -1.16
COL11A1-202ENST00000358392 Q8N2B8 174 aa7.8□□□□□ -1.16
COL11A1-202ENST00000358392 FAM218AQ96MZ4 157 aa7.8□□□□□ -1.16
COL11A1-202ENST00000358392 NAV3Q8IVL0 2385 aa7.8□□□□□ -1.16
COL11A1-202ENST00000358392 SONP18583 2426 aaKnown RBP7.8□□□□□ -1.16
COL11A1-202ENST00000358392 SRCAPQ6ZRS2 3230 aa7.8□□□□□ -1.16
COL11A1-202ENST00000358392 LINC00167Q96N53 147 aa7.79□□□□□ -1.16
COL11A1-202ENST00000358392 PHF5AQ7RTV0 110 aaKnown RBP7.79□□□□□ -1.16
COL11A1-202ENST00000358392 LINC00313P59037 77 aa7.78□□□□□ -1.16
COL11A1-202ENST00000358392 TM2D3Q9BRN9 247 aa7.78□□□□□ -1.16
COL11A1-202ENST00000358392 HIVEP3Q5T1R4 2406 aa7.78□□□□□ -1.16
COL11A1-202ENST00000358392 F8WDY8 70 aa7.78□□□□□ -1.16
COL11A1-202ENST00000358392 TP53AIP1Q9HCN2 124 aa7.77□□□□□ -1.17
COL11A1-202ENST00000358392 MUC6Q6W4X9 2439 aa7.77□□□□□ -1.17
COL11A1-202ENST00000358392 SMCPP49901 116 aaPredicted RBP7.76□□□□□ -1.17
COL11A1-202ENST00000358392 Q96NJ1 140 aa7.76□□□□□ -1.17
COL11A1-202ENST00000358392 ST20-AS1Q8NBB2 130 aa7.75□□□□□ -1.17
COL11A1-202ENST00000358392 LINC00476Q8WZB0 136 aa7.75□□□□□ -1.17
COL11A1-202ENST00000358392 MDFIQ99750 246 aa7.75□□□□□ -1.17
COL11A1-202ENST00000358392 APLNQ9ULZ1 77 aa7.74□□□□□ -1.17
COL11A1-202ENST00000358392 LINC01561Q8N1V8 128 aa7.73□□□□□ -1.17
COL11A1-202ENST00000358392 FHL3Q13643 280 aa7.73□□□□□ -1.17
COL11A1-202ENST00000358392 Q6ZQT0 140 aa7.73□□□□□ -1.17
COL11A1-202ENST00000358392 C16orf95Q9H693 158 aa7.72□□□□□ -1.17
COL11A1-202ENST00000358392 TYMSOSQ8TAI1 123 aa7.71□□□□□ -1.17
COL11A1-202ENST00000358392 TRAV22A0A0B4J277 110 aa7.71□□□□□ -1.18
COL11A1-202ENST00000358392 ELOF1P60002 83 aaKnown RBP7.7□□□□□ -1.18
COL11A1-202ENST00000358392 EPM2AB3EWF7 344 aa7.7□□□□□ -1.18
COL11A1-202ENST00000358392 IGLV5-39A0A0G2JS06 123 aa7.7□□□□□ -1.18
COL11A1-202ENST00000358392 C11orf72Q8NBR9 251 aa7.7□□□□□ -1.18
COL11A1-202ENST00000358392 LINC01600Q96MT4 127 aa7.7□□□□□ -1.18
COL11A1-202ENST00000358392 ANKHD1Q8IWZ3 2542 aaKnown RBP7.69□□□□□ -1.18
COL11A1-202ENST00000358392 COX8CQ7Z4L0 72 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms