RNA–Protein interactions for RNA: ENST00000358309.3

CX3CR1-201, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 2 BASIC

Gene CX3CR1, Length 3,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-201ENST00000358309 ETDBQ3ZM63 59 aa4.31□□□□□ -1.72
CX3CR1-201ENST00000358309 GAGE2BQ13066 116 aa4.31□□□□□ -1.72
CX3CR1-201ENST00000358309 CDC42SE2Q9NRR3 84 aa4.31□□□□□ -1.72
CX3CR1-201ENST00000358309 TINCRA0A1B0GVN0 87 aa4.3□□□□□ -1.72
CX3CR1-201ENST00000358309 INSL3P51460 131 aa4.3□□□□□ -1.72
CX3CR1-201ENST00000358309 WFDC2Q14508 124 aa4.3□□□□□ -1.72
CX3CR1-201ENST00000358309 MRPS16Q9Y3D3 137 aaKnown RBP4.3□□□□□ -1.72
CX3CR1-201ENST00000358309 ICOSQ9Y6W8 199 aa4.3□□□□□ -1.72
CX3CR1-201ENST00000358309 IGKV2-28A0A075B6P5 120 aa4.3□□□□□ -1.72
CX3CR1-201ENST00000358309 IGKV2D-28P01615 120 aa4.3□□□□□ -1.72
CX3CR1-201ENST00000358309 RPL18AQ02543 176 aaKnown RBP4.3□□□□□ -1.72
CX3CR1-201ENST00000358309 FAM104AQ969W3 186 aa4.3□□□□□ -1.72
CX3CR1-201ENST00000358309 A0A0J9YXY3 114 aa4.3□□□□□ -1.72
CX3CR1-201ENST00000358309 RPL37AP8A6NKH3 93 aa4.3□□□□□ -1.72
CX3CR1-201ENST00000358309 J3QR89 54 aa4.3□□□□□ -1.72
CX3CR1-201ENST00000358309 LINC00959A0A1B0GUT2 108 aa4.29□□□□□ -1.72
CX3CR1-201ENST00000358309 TEX48A0A1B0GUV7 120 aa4.29□□□□□ -1.72
CX3CR1-201ENST00000358309 DNAH10OSP0CZ25 163 aa4.29□□□□□ -1.72
CX3CR1-201ENST00000358309 SS18Q15532 418 aa4.29□□□□□ -1.72
CX3CR1-201ENST00000358309 CEND1Q8N111 149 aa4.29□□□□□ -1.72
CX3CR1-201ENST00000358309 DEFB105AQ8NG35 78 aa4.29□□□□□ -1.72
CX3CR1-201ENST00000358309 ODF3Q96PU9 254 aa4.29□□□□□ -1.72
CX3CR1-201ENST00000358309 A0A1B0GWB2 263 aa4.29□□□□□ -1.72
CX3CR1-201ENST00000358309 FABP2P12104 132 aa4.29□□□□□ -1.72
CX3CR1-201ENST00000358309 LYPD5Q6UWN5 251 aa4.29□□□□□ -1.72
CX3CR1-201ENST00000358309 FAM19A5Q7Z5A7 132 aaPredicted RBP4.29□□□□□ -1.72
CX3CR1-201ENST00000358309 H3BRM9 83 aa4.28□□□□□ -1.72
CX3CR1-201ENST00000358309 RPL13AP40429 203 aaKnown RBP4.28□□□□□ -1.72
CX3CR1-201ENST00000358309 UFSP1Q6NVU6 142 aa4.28□□□□□ -1.72
CX3CR1-201ENST00000358309 WFDC9Q8NEX5 89 aa4.28□□□□□ -1.72
CX3CR1-201ENST00000358309 PRKDCP78527 4128 aaKnown RBP4.28□□□□□ -1.72
CX3CR1-201ENST00000358309 TMEM223A0PJW6 202 aa4.28□□□□□ -1.72
CX3CR1-201ENST00000358309 UBE2D1P51668 147 aa4.28□□□□□ -1.72
CX3CR1-201ENST00000358309 SPAG11BQ08648 103 aa4.28□□□□□ -1.72
CX3CR1-201ENST00000358309 TRBV6-4A0A1B0GX49 114 aa4.28□□□□□ -1.72
CX3CR1-201ENST00000358309 C9JAW5 83 aa4.28□□□□□ -1.72
CX3CR1-201ENST00000358309 E9PLD3 99 aa4.28□□□□□ -1.72
CX3CR1-201ENST00000358309 CCDC179H3BU77 68 aa4.28□□□□□ -1.72
CX3CR1-201ENST00000358309 SMIM1B2RUZ4 78 aa4.27□□□□□ -1.73
CX3CR1-201ENST00000358309 MIFP14174 115 aa4.27□□□□□ -1.73
CX3CR1-201ENST00000358309 TMEM126AQ9H061 195 aa4.27□□□□□ -1.73
CX3CR1-201ENST00000358309 CHTF8P0CG12 524 aa4.27□□□□□ -1.73
CX3CR1-201ENST00000358309 MED14OSP0DP75 135 aa4.27□□□□□ -1.73
CX3CR1-201ENST00000358309 PAPPA-AS1Q5QFB9 102 aa4.27□□□□□ -1.73
CX3CR1-201ENST00000358309 COX7B2Q8TF08 81 aa4.27□□□□□ -1.73
CX3CR1-201ENST00000358309 CAMK2N2Q96S95 79 aa4.27□□□□□ -1.73
CX3CR1-201ENST00000358309 TIMM17AQ99595 171 aa4.27□□□□□ -1.73
CX3CR1-201ENST00000358309 SPANXA1Q9NS26 97 aa4.27□□□□□ -1.73
CX3CR1-201ENST00000358309 IGHV1-58A0A0C4DH39 117 aa4.26□□□□□ -1.73
CX3CR1-201ENST00000358309 LOC107984640A0A0U1RRK4 108 aa4.26□□□□□ -1.73
CX3CR1-201ENST00000358309 COX7A2LO14548 114 aa4.26□□□□□ -1.73
CX3CR1-201ENST00000358309 CFC1BP0CG36 223 aa4.26□□□□□ -1.73
CX3CR1-201ENST00000358309 CFC1P0CG37 223 aa4.26□□□□□ -1.73
CX3CR1-201ENST00000358309 CMC4P56277 68 aaPredicted RBP4.26□□□□□ -1.73
CX3CR1-201ENST00000358309 SOSTDC1Q6X4U4 206 aa4.26□□□□□ -1.73
CX3CR1-201ENST00000358309 NTN5Q8WTR8 489 aaPredicted RBP4.26□□□□□ -1.73
CX3CR1-201ENST00000358309 TRBV6-5A0A0K0K1A5 114 aa4.26□□□□□ -1.73
CX3CR1-201ENST00000358309 NHLRC4P0CG21 123 aaPredicted RBP4.26□□□□□ -1.73
CX3CR1-201ENST00000358309 PKIGQ9Y2B9 76 aa4.26□□□□□ -1.73
CX3CR1-201ENST00000358309 DMBT1Q9UGM3 2413 aaPredicted RBP4.25□□□□□ -1.73
CX3CR1-201ENST00000358309 A0A0G2JQZ4 141 aa4.25□□□□□ -1.73
CX3CR1-201ENST00000358309 A0A1W2PNN7 141 aa4.25□□□□□ -1.73
CX3CR1-201ENST00000358309 FAM168BA1KXE4 195 aa4.25□□□□□ -1.73
CX3CR1-201ENST00000358309 CCL18P55774 89 aa4.25□□□□□ -1.73
CX3CR1-201ENST00000358309 CIRBPQ14011 172 aaKnown RBP4.25□□□□□ -1.73
CX3CR1-201ENST00000358309 C4orf26Q17RF5 130 aa4.25□□□□□ -1.73
CX3CR1-201ENST00000358309 SND1-IT1Q9HBX3 110 aa4.25□□□□□ -1.73
CX3CR1-201ENST00000358309 LINC00588Q9Y4M8 146 aa4.25□□□□□ -1.73
CX3CR1-201ENST00000358309 LRCOL1A6NCL2 159 aa4.25□□□□□ -1.73
CX3CR1-201ENST00000358309 J3KT08 172 aa4.25□□□□□ -1.73
CX3CR1-201ENST00000358309 K7EP34 96 aa4.25□□□□□ -1.73
CX3CR1-201ENST00000358309 DNAH10Q8IVF4 4471 aa4.25□□□□□ -1.73
CX3CR1-201ENST00000358309 HERVK_113P63121 156 aa4.24□□□□□ -1.73
CX3CR1-201ENST00000358309 S100A7L2Q5SY68 101 aa4.24□□□□□ -1.73
CX3CR1-201ENST00000358309 ENHOQ6UWT2 76 aa4.24□□□□□ -1.73
CX3CR1-201ENST00000358309 LYRM9A8MSI8 78 aa4.24□□□□□ -1.73
CX3CR1-201ENST00000358309 LEPROTO15243 131 aa4.24□□□□□ -1.73
CX3CR1-201ENST00000358309 IL17DQ8TAD2 202 aa4.24□□□□□ -1.73
CX3CR1-201ENST00000358309 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
CX3CR1-201ENST00000358309 TRAV12-1A0A0B4J245 112 aa4.23□□□□□ -1.73
CX3CR1-201ENST00000358309 A0A1W2PPM0 123 aa4.23□□□□□ -1.73
CX3CR1-201ENST00000358309 TCL1BO95988 128 aa4.23□□□□□ -1.73
CX3CR1-201ENST00000358309 MT-ATP8P03928 68 aa4.23□□□□□ -1.73
CX3CR1-201ENST00000358309 TM2D2Q9BX73 214 aa4.23□□□□□ -1.73
CX3CR1-201ENST00000358309 C9orf118A6NHY6 69 aa4.22□□□□□ -1.73
CX3CR1-201ENST00000358309 MRPS36P82909 103 aaKnown RBP4.22□□□□□ -1.73
CX3CR1-201ENST00000358309 AMELXQ99217 191 aa4.22□□□□□ -1.73
CX3CR1-201ENST00000358309 KRTAP1-5Q9BYS1 174 aa4.22□□□□□ -1.73
CX3CR1-201ENST00000358309 PRO1854Q9UHT4 67 aa4.22□□□□□ -1.73
CX3CR1-201ENST00000358309 TRIAP1O43715 76 aa4.22□□□□□ -1.73
CX3CR1-201ENST00000358309 Q6ZRU5 148 aa4.22□□□□□ -1.73
CX3CR1-201ENST00000358309 LINC00308Q8TCZ7 52 aa4.22□□□□□ -1.73
CX3CR1-201ENST00000358309 HRCT1Q6UXD1 115 aa4.22□□□□□ -1.73
CX3CR1-201ENST00000358309 LINC00336Q6ZUF6 198 aa4.22□□□□□ -1.73
CX3CR1-201ENST00000358309 IGHV3OR16-9A0A0B4J2B5 98 aa4.21□□□□□ -1.74
CX3CR1-201ENST00000358309 TAL2Q16559 108 aa4.21□□□□□ -1.74
CX3CR1-201ENST00000358309 Q8NDZ9 215 aa4.21□□□□□ -1.74
CX3CR1-201ENST00000358309 TEX49A0A1B0GTD5 131 aa4.21□□□□□ -1.74
CX3CR1-201ENST00000358309 C3orf22Q8N5N4 141 aa4.21□□□□□ -1.74
CX3CR1-201ENST00000358309 XGP55808 180 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms