RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 KRTAP10-2P60368 255 aa9.72□□□□□ -0.85
CCNE1-202ENST00000357943 C14orf177Q52M58 125 aa9.72□□□□□ -0.85
CCNE1-202ENST00000357943 IGHV3-64A0A075B6Q5 118 aa9.71□□□□□ -0.85
CCNE1-202ENST00000357943 GVQW2A0A096LPI5 108 aaPredicted RBP9.71□□□□□ -0.85
CCNE1-202ENST00000357943 ANKRD39Q53RE8 183 aa9.71□□□□□ -0.85
CCNE1-202ENST00000357943 TMEM170BQ5T4T1 132 aa9.71□□□□□ -0.85
CCNE1-202ENST00000357943 SMIM1B2RUZ4 78 aa9.71□□□□□ -0.86
CCNE1-202ENST00000357943 SPINK8P0C7L1 97 aa9.71□□□□□ -0.86
CCNE1-202ENST00000357943 UBE2V1Q13404 147 aa9.71□□□□□ -0.86
CCNE1-202ENST00000357943 LINC01561Q8N1V8 128 aa9.71□□□□□ -0.86
CCNE1-202ENST00000357943 SLPIP03973 132 aa9.7□□□□□ -0.86
CCNE1-202ENST00000357943 H3BRM9 83 aa9.69□□□□□ -0.86
CCNE1-202ENST00000357943 ZNF561-AS1K7EIQ3 104 aa9.69□□□□□ -0.86
CCNE1-202ENST00000357943 PTTG1IPP53801 180 aa9.69□□□□□ -0.86
CCNE1-202ENST00000357943 SPAG11BQ08648 103 aa9.69□□□□□ -0.86
CCNE1-202ENST00000357943 NTN5Q8WTR8 489 aaPredicted RBP9.69□□□□□ -0.86
CCNE1-202ENST00000357943 DNAH8Q96JB1 4490 aa9.68□□□□□ -0.86
CCNE1-202ENST00000357943 KIAA0087Q14695 138 aa9.67□□□□□ -0.86
CCNE1-202ENST00000357943 SLC25A34Q6PIV7 304 aa9.67□□□□□ -0.86
CCNE1-202ENST00000357943 TOMM7Q9P0U1 55 aa9.67□□□□□ -0.86
CCNE1-202ENST00000357943 IGKV2D-26A0A0A0MRZ7 120 aa9.66□□□□□ -0.86
CCNE1-202ENST00000357943 IGLV5-52A0A0A0MRZ9 124 aa9.66□□□□□ -0.86
CCNE1-202ENST00000357943 TMEM223A0PJW6 202 aa9.66□□□□□ -0.86
CCNE1-202ENST00000357943 COX8AP10176 69 aa9.66□□□□□ -0.86
CCNE1-202ENST00000357943 PGPEP1Q9NXJ5 209 aa9.66□□□□□ -0.86
CCNE1-202ENST00000357943 IGLV5-39A0A0G2JS06 123 aa9.65□□□□□ -0.86
CCNE1-202ENST00000357943 CNBPP62633 177 aaKnown RBP9.65□□□□□ -0.86
CCNE1-202ENST00000357943 Q8IZM0 81 aa9.65□□□□□ -0.86
CCNE1-202ENST00000357943 NMUP48645 174 aa9.64□□□□□ -0.87
CCNE1-202ENST00000357943 HINT1P49773 126 aaPredicted RBP9.64□□□□□ -0.87
CCNE1-202ENST00000357943 LINC01620Q4KN68 170 aa9.64□□□□□ -0.87
CCNE1-202ENST00000357943 C2orf48Q96LS8 159 aa9.64□□□□□ -0.87
CCNE1-202ENST00000357943 CAMK2N2Q96S95 79 aa9.64□□□□□ -0.87
CCNE1-202ENST00000357943 E9PLD3 99 aa9.64□□□□□ -0.87
CCNE1-202ENST00000357943 PRSS2P07478 247 aa9.64□□□□□ -0.87
CCNE1-202ENST00000357943 C6orf226Q5I0X4 101 aa9.64□□□□□ -0.87
CCNE1-202ENST00000357943 C2orf82Q6UX34 121 aa9.64□□□□□ -0.87
CCNE1-202ENST00000357943 Q6ZRU5 148 aa9.64□□□□□ -0.87
CCNE1-202ENST00000357943 COX7B2Q8TF08 81 aa9.64□□□□□ -0.87
CCNE1-202ENST00000357943 APOBP04114 4563 aaKnown RBP9.63□□□□□ -0.87
CCNE1-202ENST00000357943 HERVK_113P61574 105 aa9.63□□□□□ -0.87
CCNE1-202ENST00000357943 SYCNQ0VAF6 134 aa9.63□□□□□ -0.87
CCNE1-202ENST00000357943 C10orf25Q5T742 122 aa9.63□□□□□ -0.87
CCNE1-202ENST00000357943 PCP2Q8IVA1 136 aa9.63□□□□□ -0.87
CCNE1-202ENST00000357943 BOD1L2Q8IYS8 172 aa9.63□□□□□ -0.87
CCNE1-202ENST00000357943 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.62□□□□□ -0.87
CCNE1-202ENST00000357943 UNQ6190/PRO20217Q6UXQ8 127 aa9.62□□□□□ -0.87
CCNE1-202ENST00000357943 C9orf163Q8N9P6 203 aa9.62□□□□□ -0.87
CCNE1-202ENST00000357943 TP73-AS1Q9UF72 201 aa9.62□□□□□ -0.87
CCNE1-202ENST00000357943 NDUFA1O15239 70 aa9.61□□□□□ -0.87
CCNE1-202ENST00000357943 CARD19Q96LW7 228 aa9.61□□□□□ -0.87
CCNE1-202ENST00000357943 C16orf90A8MZG2 172 aa9.6□□□□□ -0.87
CCNE1-202ENST00000357943 CKS1BP61024 79 aa9.6□□□□□ -0.87
CCNE1-202ENST00000357943 TTTY13Q9BZ97 58 aa9.6□□□□□ -0.87
CCNE1-202ENST00000357943 F8WDY8 70 aa9.59□□□□□ -0.87
CCNE1-202ENST00000357943 GCSHP23434 173 aa9.59□□□□□ -0.87
CCNE1-202ENST00000357943 VAMP3Q15836 100 aa9.59□□□□□ -0.87
CCNE1-202ENST00000357943 BVES-AS1Q5T3Y7 98 aa9.59□□□□□ -0.87
CCNE1-202ENST00000357943 C6orf48Q9UBA6 75 aa9.59□□□□□ -0.87
CCNE1-202ENST00000357943 LEPROTO15243 131 aa9.58□□□□□ -0.88
CCNE1-202ENST00000357943 CXCL5P42830 114 aa9.58□□□□□ -0.88
CCNE1-202ENST00000357943 TSPEAR-AS2P59090 65 aa9.58□□□□□ -0.88
CCNE1-202ENST00000357943 BIRC6Q9NR09 4857 aa9.57□□□□□ -0.88
CCNE1-202ENST00000357943 KRTAP10-1P60331 282 aa9.57□□□□□ -0.88
CCNE1-202ENST00000357943 C9orf116Q5BN46 136 aaPredicted RBP9.57□□□□□ -0.88
CCNE1-202ENST00000357943 C2orf91Q6ZV80 131 aa9.57□□□□□ -0.88
CCNE1-202ENST00000357943 SDIM1Q6ZPB5 146 aa9.56□□□□□ -0.88
CCNE1-202ENST00000357943 TRBV30A0A0K0K1B3 111 aa9.56□□□□□ -0.88
CCNE1-202ENST00000357943 MYMXA0A1B0GTQ4 84 aa9.56□□□□□ -0.88
CCNE1-202ENST00000357943 A6NDN8 102 aa9.56□□□□□ -0.88
CCNE1-202ENST00000357943 J3QQQ9 107 aa9.56□□□□□ -0.88
CCNE1-202ENST00000357943 PLEKHB2Q96CS7 222 aa9.56□□□□□ -0.88
CCNE1-202ENST00000357943 ZNF625Q96I27 306 aaPredicted RBP9.56□□□□□ -0.88
CCNE1-202ENST00000357943 TAX1BP3O14907 124 aa9.55□□□□□ -0.88
CCNE1-202ENST00000357943 PCP4P48539 62 aa9.55□□□□□ -0.88
CCNE1-202ENST00000357943 RNF151Q2KHN1 245 aa9.55□□□□□ -0.88
CCNE1-202ENST00000357943 GTF2H5Q6ZYL4 71 aa9.54□□□□□ -0.88
CCNE1-202ENST00000357943 ZNF815PA8K554 130 aa9.53□□□□□ -0.88
CCNE1-202ENST00000357943 LGALS3P17931 250 aaKnown RBP9.53□□□□□ -0.88
CCNE1-202ENST00000357943 NDUFA12Q9UI09 145 aa9.53□□□□□ -0.88
CCNE1-202ENST00000357943 RYR1P21817 5038 aa9.53□□□□□ -0.88
CCNE1-202ENST00000357943 K7ERU9 68 aa9.53□□□□□ -0.88
CCNE1-202ENST00000357943 FAM30AQ9NZY2 134 aa9.53□□□□□ -0.88
CCNE1-202ENST00000357943 HIGD1BQ9P298 99 aa9.53□□□□□ -0.88
CCNE1-202ENST00000357943 KIAA1109Q2LD37 5005 aa9.52□□□□□ -0.88
CCNE1-202ENST00000357943 HSD52Q0P140 79 aa9.52□□□□□ -0.89
CCNE1-202ENST00000357943 Q6ZRP5 223 aa9.52□□□□□ -0.89
CCNE1-202ENST00000357943 HSPG2P98160 4391 aa9.51□□□□□ -0.89
CCNE1-202ENST00000357943 LOC107984640A0A0U1RRK4 108 aa9.51□□□□□ -0.89
CCNE1-202ENST00000357943 PANO1I0J062 215 aa9.51□□□□□ -0.89
CCNE1-202ENST00000357943 TLX1NBP0CAT3 122 aa9.51□□□□□ -0.89
CCNE1-202ENST00000357943 CHTF8P0CG12 524 aa9.51□□□□□ -0.89
CCNE1-202ENST00000357943 RPL18AQ02543 176 aaKnown RBP9.51□□□□□ -0.89
CCNE1-202ENST00000357943 SFTA2Q6UW10 78 aa9.51□□□□□ -0.89
CCNE1-202ENST00000357943 A0A096LNI7 61 aa9.5□□□□□ -0.89
CCNE1-202ENST00000357943 IGKV2-24A0A0C4DH68 120 aa9.5□□□□□ -0.89
CCNE1-202ENST00000357943 NDUFC2-KCTD14E9PQ53 114 aa9.5□□□□□ -0.89
CCNE1-202ENST00000357943 GAGE2BQ13066 116 aa9.5□□□□□ -0.89
CCNE1-202ENST00000357943 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.5□□□□□ -0.89
CCNE1-202ENST00000357943 PFN2P35080 140 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms