RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 UBE2DNLQ8IWF7 75 aa12.14□□□□□ -0.47
CDK11A-202ENST00000356937 HIST1H4GQ99525 98 aa12.14□□□□□ -0.47
CDK11A-202ENST00000356937 SMIM1B2RUZ4 78 aa12.13□□□□□ -0.47
CDK11A-202ENST00000356937 LGALS3P17931 250 aaKnown RBP12.13□□□□□ -0.47
CDK11A-202ENST00000356937 PLEKHB2Q96CS7 222 aa12.13□□□□□ -0.47
CDK11A-202ENST00000356937 UPK3BQ9BT76 320 aa12.13□□□□□ -0.47
CDK11A-202ENST00000356937 STARD9Q9P2P6 4700 aa12.13□□□□□ -0.47
CDK11A-202ENST00000356937 ZNF815PA8K554 130 aa12.12□□□□□ -0.47
CDK11A-202ENST00000356937 Q9H8V8 135 aa12.12□□□□□ -0.47
CDK11A-202ENST00000356937 MYMXA0A1B0GTQ4 84 aa12.12□□□□□ -0.47
CDK11A-202ENST00000356937 CD164L2Q6UWJ8 174 aa12.12□□□□□ -0.47
CDK11A-202ENST00000356937 CDIP1Q9H305 208 aa12.12□□□□□ -0.47
CDK11A-202ENST00000356937 PLECQ15149 4684 aaKnown RBP12.12□□□□□ -0.47
CDK11A-202ENST00000356937 A0A087WZ39 114 aa12.11□□□□□ -0.47
CDK11A-202ENST00000356937 MIAQ16674 131 aa12.1□□□□□ -0.47
CDK11A-202ENST00000356937 IGLV5-39A0A0G2JS06 123 aa12.09□□□□□ -0.47
CDK11A-202ENST00000356937 TSPAN13O95857 204 aa12.09□□□□□ -0.47
CDK11A-202ENST00000356937 MUC7Q8TAX7 377 aa12.09□□□□□ -0.47
CDK11A-202ENST00000356937 TRAV8-4A0A0B4J246 113 aa12.09□□□□□ -0.47
CDK11A-202ENST00000356937 COX7A2LO14548 114 aa12.08□□□□□ -0.48
CDK11A-202ENST00000356937 Q9HAA7 133 aa12.08□□□□□ -0.48
CDK11A-202ENST00000356937 TOMM7Q9P0U1 55 aa12.08□□□□□ -0.48
CDK11A-202ENST00000356937 MALP21145 153 aa12.07□□□□□ -0.48
CDK11A-202ENST00000356937 SMCPP49901 116 aaPredicted RBP12.07□□□□□ -0.48
CDK11A-202ENST00000356937 SCGB1D4Q6XE38 83 aa12.07□□□□□ -0.48
CDK11A-202ENST00000356937 NDUFA12Q9UI09 145 aa12.07□□□□□ -0.48
CDK11A-202ENST00000356937 WWC2-AS2Q96NR7 200 aa12.06□□□□□ -0.48
CDK11A-202ENST00000356937 PGPEP1Q9NXJ5 209 aa12.06□□□□□ -0.48
CDK11A-202ENST00000356937 ERG28Q9UKR5 140 aa12.06□□□□□ -0.48
CDK11A-202ENST00000356937 IGKV2D-24A0A075B6R9 120 aa12.05□□□□□ -0.48
CDK11A-202ENST00000356937 LYRM7Q5U5X0 104 aa12.05□□□□□ -0.48
CDK11A-202ENST00000356937 COX7B2Q8TF08 81 aa12.05□□□□□ -0.48
CDK11A-202ENST00000356937 PPDPFLQ8WWR9 84 aa12.05□□□□□ -0.48
CDK11A-202ENST00000356937 C1orf43Q9BWL3 253 aa12.05□□□□□ -0.48
CDK11A-202ENST00000356937 IBA57-AS1B1ANH7 110 aa12.04□□□□□ -0.48
CDK11A-202ENST00000356937 C10orf126Q8N4M7 172 aa12.04□□□□□ -0.48
CDK11A-202ENST00000356937 MT-ATP8P03928 68 aa12.04□□□□□ -0.48
CDK11A-202ENST00000356937 XGP55808 180 aa12.03□□□□□ -0.48
CDK11A-202ENST00000356937 TEN1Q86WV5 123 aa12.03□□□□□ -0.48
CDK11A-202ENST00000356937 KRTAP26-1Q6PEX3 210 aa12.02□□□□□ -0.49
CDK11A-202ENST00000356937 LINC01561Q8N1V8 128 aa12.02□□□□□ -0.49
CDK11A-202ENST00000356937 ZNF625Q96I27 306 aaPredicted RBP12.01□□□□□ -0.49
CDK11A-202ENST00000356937 NDUFA1O15239 70 aa12□□□□□ -0.49
CDK11A-202ENST00000356937 PRSS2P07478 247 aa12□□□□□ -0.49
CDK11A-202ENST00000356937 C6orf226Q5I0X4 101 aa12□□□□□ -0.49
CDK11A-202ENST00000356937 KRTAP1-5Q9BYS1 174 aa12□□□□□ -0.49
CDK11A-202ENST00000356937 A0A0J9YXY3 114 aa12□□□□□ -0.49
CDK11A-202ENST00000356937 TRBV20-1A0A075B6N2 111 aa11.99□□□□□ -0.49
CDK11A-202ENST00000356937 CARD19Q96LW7 228 aa11.99□□□□□ -0.49
CDK11A-202ENST00000356937 PSMB2P49721 201 aa11.98□□□□□ -0.49
CDK11A-202ENST00000356937 Q8IZM0 81 aa11.98□□□□□ -0.49
CDK11A-202ENST00000356937 LOC107984156A0A0G2JMH3 177 aa11.97□□□□□ -0.49
CDK11A-202ENST00000356937 ARL17AQ8IVW1 177 aa11.97□□□□□ -0.49
CDK11A-202ENST00000356937 DNAH1Q9P2D7 4330 aa11.96□□□□□ -0.49
CDK11A-202ENST00000356937 SRSF9Q13242 221 aaKnown RBP eCLIP11.96□□□□□ -0.49
CDK11A-202ENST00000356937 KIAA0087Q14695 138 aa11.96□□□□□ -0.49
CDK11A-202ENST00000356937 C2orf82Q6UX34 121 aa11.96□□□□□ -0.49
CDK11A-202ENST00000356937 LINC00526Q96FQ7 95 aa11.96□□□□□ -0.49
CDK11A-202ENST00000356937 ANAPC13Q9BS18 74 aa11.96□□□□□ -0.49
CDK11A-202ENST00000356937 M0QXV9 152 aa11.95□□□□□ -0.5
CDK11A-202ENST00000356937 SPAG11BQ08648 103 aa11.95□□□□□ -0.5
CDK11A-202ENST00000356937 CASC10Q5T4H9 136 aa11.95□□□□□ -0.5
CDK11A-202ENST00000356937 RMI2Q96E14 147 aa11.95□□□□□ -0.5
CDK11A-202ENST00000356937 A0A0U1RRA0 63 aa11.94□□□□□ -0.5
CDK11A-202ENST00000356937 HERV-K104P63124 156 aa11.94□□□□□ -0.5
CDK11A-202ENST00000356937 MEIG1Q5JSS6 88 aa11.94□□□□□ -0.5
CDK11A-202ENST00000356937 C6orf223Q8N319 242 aa11.94□□□□□ -0.5
CDK11A-202ENST00000356937 NBDYA0A0U1RRE5 68 aa11.93□□□□□ -0.5
CDK11A-202ENST00000356937 HIGD2BQ4VC39 106 aa11.93□□□□□ -0.5
CDK11A-202ENST00000356937 ADAMTSL4-AS1Q5T5F5 129 aa11.93□□□□□ -0.5
CDK11A-202ENST00000356937 TCL1BO95988 128 aa11.92□□□□□ -0.5
CDK11A-202ENST00000356937 C15orf56Q8N910 161 aa11.92□□□□□ -0.5
CDK11A-202ENST00000356937 LITAFQ99732 161 aa11.92□□□□□ -0.5
CDK11A-202ENST00000356937 TTC32Q5I0X7 151 aa11.91□□□□□ -0.5
CDK11A-202ENST00000356937 M0R2N4 97 aa11.91□□□□□ -0.5
CDK11A-202ENST00000356937 CIRBPQ14011 172 aaKnown RBP11.91□□□□□ -0.5
CDK11A-202ENST00000356937 DAND5Q8N907 189 aa11.91□□□□□ -0.5
CDK11A-202ENST00000356937 VPS13DQ5THJ4 4388 aa11.91□□□□□ -0.5
CDK11A-202ENST00000356937 ZNF561-AS1K7EIQ3 104 aa11.9□□□□□ -0.5
CDK11A-202ENST00000356937 C3orf84H3BNL1 204 aa11.9□□□□□ -0.5
CDK11A-202ENST00000356937 CXCL5P42830 114 aa11.9□□□□□ -0.5
CDK11A-202ENST00000356937 LY6G6CO95867 125 aa11.89□□□□□ -0.51
CDK11A-202ENST00000356937 SFTA2Q6UW10 78 aa11.89□□□□□ -0.51
CDK11A-202ENST00000356937 ANKRD29Q8N6D5 301 aa11.89□□□□□ -0.51
CDK11A-202ENST00000356937 TIMM17BO60830 172 aa11.89□□□□□ -0.51
CDK11A-202ENST00000356937 NPC2P61916 151 aa11.89□□□□□ -0.51
CDK11A-202ENST00000356937 UNQ6190/PRO20217Q6UXQ8 127 aa11.89□□□□□ -0.51
CDK11A-202ENST00000356937 PFN2P35080 140 aa11.88□□□□□ -0.51
CDK11A-202ENST00000356937 SS18L2Q9UHA2 77 aa11.88□□□□□ -0.51
CDK11A-202ENST00000356937 LECT2O14960 151 aa11.88□□□□□ -0.51
CDK11A-202ENST00000356937 C10orf25Q5T742 122 aa11.88□□□□□ -0.51
CDK11A-202ENST00000356937 NTN5Q8WTR8 489 aaPredicted RBP11.88□□□□□ -0.51
CDK11A-202ENST00000356937 PSCAO43653 123 aa11.87□□□□□ -0.51
CDK11A-202ENST00000356937 CFC1BP0CG36 223 aa11.87□□□□□ -0.51
CDK11A-202ENST00000356937 CFC1P0CG37 223 aa11.87□□□□□ -0.51
CDK11A-202ENST00000356937 USP17L23D6RBM5 183 aa11.86□□□□□ -0.51
CDK11A-202ENST00000356937 SCGB1C2P0DMR2 95 aa11.86□□□□□ -0.51
CDK11A-202ENST00000356937 LINC00158P58513 81 aa11.86□□□□□ -0.51
CDK11A-202ENST00000356937 MUSTN1Q8IVN3 82 aa11.86□□□□□ -0.51
CDK11A-202ENST00000356937 SPANXDQ9BXN6 97 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms